Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_L23
         (887 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-2724|AAF57671.2|  194|Drosophila melanogaster CG5497-PA...   172   6e-43
AY094907-1|AAM11260.1|  194|Drosophila melanogaster RH13070p pro...   169   3e-42

>AE013599-2724|AAF57671.2|  194|Drosophila melanogaster CG5497-PA
           protein.
          Length = 194

 Score =  172 bits (418), Expect = 6e-43
 Identities = 84/153 (54%), Positives = 109/153 (71%), Gaps = 3/153 (1%)
 Frame = +3

Query: 273 VLNLCSYSNIPPYSDSGNEIDKDISQ--EKLSGFAKAFEKQSQILENPE-EEKSYTFASL 443
           V+ L S +   P  +S   ++ + ++      GFA+AF+K +     P+  E + TFASL
Sbjct: 26  VIRLISGNTEKPAEESTPAVNTETAEIGSSKGGFARAFDKYTAPATPPQLPEDNQTFASL 85

Query: 444 LRNSKLMDLGDPVGKTVIGKIFHVVEDDLYIDFGWKFHCVCTRPNLRGEEYVRGTRVRIQ 623
           LRNSKL+DL +  GK V GKIFHVV DDLYIDFGWKFHCVC+RP     +YVRG RVR++
Sbjct: 86  LRNSKLIDLDNAEGKVVSGKIFHVVGDDLYIDFGWKFHCVCSRPTRNASDYVRGARVRLR 145

Query: 624 INDLELSSRFLGSSTDLTLLEADCKLLGIISTP 722
           I DLELS++FLGSS D+T+LEADC LLG++STP
Sbjct: 146 IKDLELSTKFLGSSKDITILEADCHLLGLLSTP 178


>AY094907-1|AAM11260.1|  194|Drosophila melanogaster RH13070p
           protein.
          Length = 194

 Score =  169 bits (412), Expect = 3e-42
 Identities = 83/153 (54%), Positives = 108/153 (70%), Gaps = 3/153 (1%)
 Frame = +3

Query: 273 VLNLCSYSNIPPYSDSGNEIDKDISQ--EKLSGFAKAFEKQSQILENPE-EEKSYTFASL 443
           V+ L S +   P  +S   ++ + ++      GFA+AF+K +     P+  E + TFASL
Sbjct: 26  VIRLISGNTEKPAEESTPAVNTETAEIGSSKGGFARAFDKYTAPATPPQLPEDNQTFASL 85

Query: 444 LRNSKLMDLGDPVGKTVIGKIFHVVEDDLYIDFGWKFHCVCTRPNLRGEEYVRGTRVRIQ 623
           LRNSKL+DL +  GK V GKIFHVV DDLYIDFGWKFHCVC+RP     +YVRG RVR++
Sbjct: 86  LRNSKLIDLDNAEGKVVSGKIFHVVGDDLYIDFGWKFHCVCSRPTRNASDYVRGARVRLR 145

Query: 624 INDLELSSRFLGSSTDLTLLEADCKLLGIISTP 722
           I DLELS++F GSS D+T+LEADC LLG++STP
Sbjct: 146 IKDLELSTKFQGSSKDITILEADCHLLGLLSTP 178


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,650,018
Number of Sequences: 53049
Number of extensions: 610634
Number of successful extensions: 1298
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1298
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)