Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_L22
(910 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 65 2e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 53 1e-05
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 44 0.007
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.050
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 41 0.050
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.088
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 38 0.47
UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisp... 34 5.8
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.8
UniRef50_A7SGD2 Cluster: Predicted protein; n=1; Nematostella ve... 33 7.6
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 65.3 bits (152), Expect = 2e-09
Identities = 32/43 (74%), Positives = 32/43 (74%), Gaps = 2/43 (4%)
Frame = -3
Query: 785 RSW--PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 663
R W P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 14 RCWLLPVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +3
Query: 576 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 743
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +3
Query: 600 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLT 698
R +C G +PLPRSLTR ARSFGCGERY+LT
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58
Score = 38.3 bits (85), Expect = 0.27
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +2
Query: 806 RFSIGSAPLXEHXKIHXQVXGGETRQD 886
RFSIGSAPL K Q+ GGETRQD
Sbjct: 83 RFSIGSAPLTSIAKSDAQISGGETRQD 109
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +2
Query: 695 HSKAVIRLSTESGDNAGKNM 754
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 43.6 bits (98), Expect = 0.007
Identities = 24/38 (63%), Positives = 24/38 (63%)
Frame = +2
Query: 797 RCWRFSIGSAPLXEHXKIHXQVXGGETRQDL*XTSXXP 910
RC RFSIGSAPL KI QV GGETRQD T P
Sbjct: 13 RC-RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFP 49
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.050
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 574 SALMNRPTRGERRFAYW 624
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 40.7 bits (91), Expect = 0.050
Identities = 22/44 (50%), Positives = 24/44 (54%)
Frame = +2
Query: 779 RNXKXXRCWRFSIGSAPLXEHXKIHXQVXGGETRQDL*XTSXXP 910
R + R RFSIGSAPL K Q+ GGETRQD T P
Sbjct: 42 REVRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFP 85
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.088
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1
Query: 646 ERGSGRAPNTQTASPRALADSLMQ 575
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 37.5 bits (83), Expect = 0.47
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +1
Query: 388 MIRYIDEFGQTTTRMQ 435
MIRYIDEFGQTTTRMQ
Sbjct: 349 MIRYIDEFGQTTTRMQ 364
>UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma
factor - Lentisphaera araneosa HTCC2155
Length = 201
Score = 33.9 bits (74), Expect = 5.8
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 457 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTRGERRFAYW 624
+ DA F+ I N +N+++C + +V +VWE + P RG +F YW
Sbjct: 32 DFSDAYRRFIYIALRNNGLNHHDCEEVVQRVMIKVWEKIARFKYNPGRG--KFRYW 85
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.8
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -2
Query: 537 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 373
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_A7SGD2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 154
Score = 33.5 bits (73), Expect = 7.6
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 791 FXRSWPFAGLLLTCSFLRYPLILWITV 711
F +SW AGL++ CSFL + W+T+
Sbjct: 106 FGQSWIAAGLMVLCSFLWFVYCFWVTI 132
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 758,796,006
Number of Sequences: 1657284
Number of extensions: 13537353
Number of successful extensions: 35429
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 34140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35425
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 82801539422
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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