Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_L19
         (960 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069682-1|AAL39827.1| 1332|Drosophila melanogaster LD45430p pro...    29   7.2  
AF276964-1|AAO23023.1| 1375|Drosophila melanogaster lingerer pro...    29   7.2  
AF276963-1|AAO23022.1| 1332|Drosophila melanogaster lingerer pro...    29   7.2  
AE013599-579|AAX52724.1| 1375|Drosophila melanogaster CG8715-PD,...    29   7.2  
AE013599-578|AAF59144.3| 1332|Drosophila melanogaster CG8715-PB,...    29   7.2  
AE013599-577|AAS64895.2| 1343|Drosophila melanogaster CG8715-PC,...    29   7.2  
AE013599-576|AAM68848.2| 1343|Drosophila melanogaster CG8715-PA,...    29   7.2  

>AY069682-1|AAL39827.1| 1332|Drosophila melanogaster LD45430p
           protein.
          Length = 1332

 Score = 29.5 bits (63), Expect = 7.2
 Identities = 16/44 (36%), Positives = 16/44 (36%)
 Frame = -1

Query: 960 GGXXGPXGGXXXPXXRENPXRGGXLRXGPTXXPXGGXGGXGFXG 829
           GG  GP GG           RGG    G T  P G  G  G  G
Sbjct: 231 GGRSGPGGGGRGGGFVSRSGRGGGRMGGRTGGPRGDRGSGGPGG 274


>AF276964-1|AAO23023.1| 1375|Drosophila melanogaster lingerer
           protein type2 protein.
          Length = 1375

 Score = 29.5 bits (63), Expect = 7.2
 Identities = 16/44 (36%), Positives = 16/44 (36%)
 Frame = -1

Query: 960 GGXXGPXGGXXXPXXRENPXRGGXLRXGPTXXPXGGXGGXGFXG 829
           GG  GP GG           RGG    G T  P G  G  G  G
Sbjct: 231 GGRSGPGGGGRGGGFVSRSGRGGGRMGGRTGGPRGDRGSGGPGG 274


>AF276963-1|AAO23022.1| 1332|Drosophila melanogaster lingerer
           protein type1 protein.
          Length = 1332

 Score = 29.5 bits (63), Expect = 7.2
 Identities = 16/44 (36%), Positives = 16/44 (36%)
 Frame = -1

Query: 960 GGXXGPXGGXXXPXXRENPXRGGXLRXGPTXXPXGGXGGXGFXG 829
           GG  GP GG           RGG    G T  P G  G  G  G
Sbjct: 231 GGRSGPGGGGRGGGFVSRSGRGGGRMGGRTGGPRGDRGSGGPGG 274


>AE013599-579|AAX52724.1| 1375|Drosophila melanogaster CG8715-PD,
           isoform D protein.
          Length = 1375

 Score = 29.5 bits (63), Expect = 7.2
 Identities = 16/44 (36%), Positives = 16/44 (36%)
 Frame = -1

Query: 960 GGXXGPXGGXXXPXXRENPXRGGXLRXGPTXXPXGGXGGXGFXG 829
           GG  GP GG           RGG    G T  P G  G  G  G
Sbjct: 231 GGRSGPGGGGRGGGFVSRSGRGGGRMGGRTGGPRGDRGSGGPGG 274


>AE013599-578|AAF59144.3| 1332|Drosophila melanogaster CG8715-PB,
           isoform B protein.
          Length = 1332

 Score = 29.5 bits (63), Expect = 7.2
 Identities = 16/44 (36%), Positives = 16/44 (36%)
 Frame = -1

Query: 960 GGXXGPXGGXXXPXXRENPXRGGXLRXGPTXXPXGGXGGXGFXG 829
           GG  GP GG           RGG    G T  P G  G  G  G
Sbjct: 231 GGRSGPGGGGRGGGFVSRSGRGGGRMGGRTGGPRGDRGSGGPGG 274


>AE013599-577|AAS64895.2| 1343|Drosophila melanogaster CG8715-PC,
           isoform C protein.
          Length = 1343

 Score = 29.5 bits (63), Expect = 7.2
 Identities = 16/44 (36%), Positives = 16/44 (36%)
 Frame = -1

Query: 960 GGXXGPXGGXXXPXXRENPXRGGXLRXGPTXXPXGGXGGXGFXG 829
           GG  GP GG           RGG    G T  P G  G  G  G
Sbjct: 231 GGRSGPGGGGRGGGFVSRSGRGGGRMGGRTGGPRGDRGSGGPGG 274


>AE013599-576|AAM68848.2| 1343|Drosophila melanogaster CG8715-PA,
           isoform A protein.
          Length = 1343

 Score = 29.5 bits (63), Expect = 7.2
 Identities = 16/44 (36%), Positives = 16/44 (36%)
 Frame = -1

Query: 960 GGXXGPXGGXXXPXXRENPXRGGXLRXGPTXXPXGGXGGXGFXG 829
           GG  GP GG           RGG    G T  P G  G  G  G
Sbjct: 231 GGRSGPGGGGRGGGFVSRSGRGGGRMGGRTGGPRGDRGSGGPGG 274


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,992,758
Number of Sequences: 53049
Number of extensions: 229857
Number of successful extensions: 700
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 611
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4792133502
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)