Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_L16
(1002 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 38 0.002
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.048
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 32 0.11
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.25
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 30 0.45
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 30 0.45
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 30 0.59
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 28 1.8
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 3.1
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 27 5.5
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 9.6
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 37.9 bits (84), Expect = 0.002
Identities = 21/55 (38%), Positives = 22/55 (40%)
Frame = +2
Query: 653 STPPPARXNILPTXAPAXXXTLQXPXGPXRXPXPXPPPXXPXXWASXXXXTPPPP 817
S PPP I+PT APA P P P PPP A PPPP
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPV--PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 30.7 bits (66), Expect = 0.34
Identities = 22/74 (29%), Positives = 23/74 (31%)
Frame = +2
Query: 599 PXPPXPXTXVXXPXGGVXSTPPPARXNILPTXAPAXXXTLQXPXGPXRXPXPXPPPXXPX 778
P PP P V P PPPA P P P G P PPP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP-------PPPGVAGAGPPPPPPPPPA 784
Query: 779 XWASXXXXTPPPPR 820
A P P+
Sbjct: 785 VSAGGSRYYAPAPQ 798
Score = 29.1 bits (62), Expect = 1.0
Identities = 24/98 (24%), Positives = 29/98 (29%), Gaps = 5/98 (5%)
Frame = +2
Query: 647 VXSTPPPARXNILPTXAPAXXXTLQXPXGPXRX-----PXPXPPPXXPXXWASXXXXTPP 811
+ S+P P ++ T L+ P P P P P P P PP
Sbjct: 706 ISSSPSPLLPDVSDTVEEQQKLLLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP 765
Query: 812 PPRKXXQXXPPSXGRXGPPPXTKXNXSXXXPPXXXPPP 925
PP PP PPP S P P
Sbjct: 766 PPPGVAGAGPPPP--PPPPPAVSAGGSRYYAPAPQAEP 801
Score = 29.1 bits (62), Expect = 1.0
Identities = 18/59 (30%), Positives = 20/59 (33%)
Frame = +2
Query: 758 PPPXXPXXWASXXXXTPPPPRKXXQXXPPSXGRXGPPPXTKXNXSXXXPPXXXPPPHLS 934
PPP P + TP P P G PPP PP PPP +S
Sbjct: 732 PPPPPP----AVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVS 786
Score = 28.3 bits (60), Expect = 1.8
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1
Query: 760 PPEXPPXXGLLXXXNPPPPP 819
PP PP G+ PPPPP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPP 780
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.5 bits (73), Expect = 0.048
Identities = 31/111 (27%), Positives = 37/111 (33%), Gaps = 2/111 (1%)
Frame = +2
Query: 596 PPXPPXPXTXVXXPXGGVXSTPP--PARXNILPTXAPAXXXTLQXPXGPXRXPXPXPPPX 769
P PP P P G S+PP P R + PA T + P P P
Sbjct: 251 PAPPPIPP-----PSNGTVSSPPNSPPRPIAPVSMNPAINST-------SKPPLPPPSSR 298
Query: 770 XPXXWASXXXXTPPPPRKXXQXXPPSXGRXGPPPXTKXNXSXXXPPXXXPP 922
+ PPPP PPS G PP + + PP PP
Sbjct: 299 VSAAALAANKKRPPPP------PPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 29.1 bits (62), Expect = 1.0
Identities = 25/96 (26%), Positives = 26/96 (27%), Gaps = 6/96 (6%)
Frame = +2
Query: 596 PPXPPXPXTXVXXPXGGVX--STPPPARXNILPTXAPAXXXTLQXPX----GPXRXPXPX 757
PP P P G STPP LP AP P P P P
Sbjct: 392 PPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPP 451
Query: 758 PPPXXPXXWASXXXXTPPPPRKXXQXXPPSXGRXGP 865
P P A P PP P+ P
Sbjct: 452 SAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 28.7 bits (61), Expect = 1.4
Identities = 33/115 (28%), Positives = 40/115 (34%), Gaps = 5/115 (4%)
Frame = +2
Query: 596 PPXPPXPXTXVXXPXGGVXSTPPPARXNILPTXAPAXXXTLQXPXGPXRXPXPXPPPXXP 775
PP PP P + V PP P P+ + P G PPP P
Sbjct: 290 PPLPP-PSSRVSAAALAANKKRPP------PPPPPSRRNRGKPPIGNGSSNSSLPPPPPP 342
Query: 776 -XXWASXXXXTPPPPRKXXQXXP----PSXGRXGPPPXTKXNXSXXXPPXXXPPP 925
A+ PP R P PS GR PPP + + + PP PPP
Sbjct: 343 PRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQ-PPPLSS-SRAVSNPP--APPP 393
Score = 27.9 bits (59), Expect = 2.4
Identities = 30/121 (24%), Positives = 34/121 (28%), Gaps = 7/121 (5%)
Frame = +2
Query: 584 GXXXPPXPPX---PXTXVXXPX--GGVXSTPPPARXNILPTXAPAXXXTLQXPXGPXRXP 748
G PP PP P T P + PPA +P + L P
Sbjct: 357 GRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPP 416
Query: 749 XPXPPPXXPXXWASXXXXTPPP-PRKXXQXXP-PSXGRXGPPPXTKXNXSXXXPPXXXPP 922
P PP P S PP P P P PP + PP P
Sbjct: 417 VPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAP 476
Query: 923 P 925
P
Sbjct: 477 P 477
Score = 25.8 bits (54), Expect = 9.6
Identities = 17/66 (25%), Positives = 18/66 (27%)
Frame = +2
Query: 725 PXGPXRXPXPXPPPXXPXXWASXXXXTPPPPRKXXQXXPPSXGRXGPPPXTKXNXSXXXP 904
P P P PP P A PPP P S R P +
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSK 289
Query: 905 PXXXPP 922
P PP
Sbjct: 290 PPLPPP 295
Score = 25.8 bits (54), Expect = 9.6
Identities = 18/81 (22%), Positives = 19/81 (23%)
Frame = +1
Query: 751 PXTPPEXPPXXGLLXXXNPPPPPQTXTXXXXXXXXXXXXXXNXXKXKXLPXPXRXPXPPP 930
P T + PP NPP PP P P PP
Sbjct: 370 PSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPP 429
Query: 931 XXXXXAXPHKXHXXPRXPSXP 993
A P P P P
Sbjct: 430 SLPPSAPPSLPMGAPAAPPLP 450
Score = 25.8 bits (54), Expect = 9.6
Identities = 25/111 (22%), Positives = 30/111 (27%), Gaps = 2/111 (1%)
Frame = +2
Query: 599 PXPPXPXTXVXXPXGGVXSTPPPARXNILPTXAPAXXXTLQXPXGPXRXPXPXP--PPXX 772
P P V P + P + + P + T P P P P PP
Sbjct: 376 PPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSA 435
Query: 773 PXXWASXXXXTPPPPRKXXQXXPPSXGRXGPPPXTKXNXSXXXPPXXXPPP 925
P PP P P G PP + PP P P
Sbjct: 436 PPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPP--AAPAPPPAPAPAP 484
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 32.3 bits (70), Expect = 0.11
Identities = 30/114 (26%), Positives = 35/114 (30%), Gaps = 6/114 (5%)
Frame = +2
Query: 596 PPXPPXPXTXVXXPXGGVXSTPPPARXNILPTXAPAXXXTLQXPXGPXRXPXPXP---PP 766
PP P P + + + P PA I P P+ P P P PP
Sbjct: 1063 PPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPP 1122
Query: 767 XXPXXWASXXXXTP---PPPRKXXQXXPPSXGRXGPPPXTKXNXSXXXPPXXXP 919
A+ P PP K PP G PP K S PP P
Sbjct: 1123 VPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPK--PSVAAPPVPAP 1174
Score = 31.5 bits (68), Expect = 0.19
Identities = 27/108 (25%), Positives = 31/108 (28%), Gaps = 3/108 (2%)
Frame = +2
Query: 605 PPXPXTXVXXPXGGVXSTPPPA-RXNILPTXAPAXXXTLQXPXGPXRXPXPXPPP--XXP 775
PP P V P S PP + ++ PA + P P PPP P
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP 1199
Query: 776 XXWASXXXXTPPPPRKXXQXXPPSXGRXGPPPXTKXNXSXXXPPXXXP 919
S PPP PS G P T P P
Sbjct: 1200 VPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAP 1247
Score = 31.1 bits (67), Expect = 0.25
Identities = 30/109 (27%), Positives = 33/109 (30%), Gaps = 4/109 (3%)
Frame = +2
Query: 605 PPXPXTXVXXPXGGVXSTPPPARXNI----LPTXAPAXXXTLQXPXGPXRXPXPXPPPXX 772
PP P P STPP + + P PA + P P P P P
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAP-PVPAPSG 1090
Query: 773 PXXWASXXXXTPPPPRKXXQXXPPSXGRXGPPPXTKXNXSXXXPPXXXP 919
PP P K PP G PP K S PP P
Sbjct: 1091 IPPVPKPSVAAPPVP-KPSVAVPPVPAPSGAPPVPK--PSVAAPPVPVP 1136
Score = 30.3 bits (65), Expect = 0.45
Identities = 23/92 (25%), Positives = 27/92 (29%)
Frame = +2
Query: 596 PPXPPXPXTXVXXPXGGVXSTPPPARXNILPTXAPAXXXTLQXPXGPXRXPXPXPPPXXP 775
P PP V P GV PPP+ +PT + L P P P P
Sbjct: 1190 PVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAG----LPPVPVPTAKAPPVPAPSSE 1245
Query: 776 XXWASXXXXTPPPPRKXXQXXPPSXGRXGPPP 871
S + P P P S P
Sbjct: 1246 APSVSTPRSSVPSPHSNASPSPTSSSMASAAP 1277
Score = 29.5 bits (63), Expect = 0.78
Identities = 25/109 (22%), Positives = 26/109 (23%)
Frame = +2
Query: 596 PPXPPXPXTXVXXPXGGVXSTPPPARXNILPTXAPAXXXTLQXPXGPXRXPXPXPPPXXP 775
PP P P V P PA P P+ P P P P P
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAP-PVPVPSGAPPVPKPSVAAP 1150
Query: 776 XXWASXXXXTPPPPRKXXQXXPPSXGRXGPPPXTKXNXSXXXPPXXXPP 922
A P P P P P PP PP
Sbjct: 1151 PVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP 1199
Score = 27.5 bits (58), Expect = 3.1
Identities = 24/111 (21%), Positives = 29/111 (26%), Gaps = 1/111 (0%)
Frame = +2
Query: 599 PXPPXPXTXVXXPXGGVXSTPPPARXNILPTXAPAXXXTLQXPXGPXRXPXPXPPPXXPX 778
P P P P V + P PA + +P P P P P P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP 1209
Query: 779 XWASXXXXTPPPPRKXXQXXPPSXGRXGP-PPXTKXNXSXXXPPXXXPPPH 928
P P P + P P + S P P PH
Sbjct: 1210 VPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVPSPH 1260
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.1 bits (67), Expect = 0.25
Identities = 25/94 (26%), Positives = 35/94 (37%)
Frame = +2
Query: 599 PXPPXPXTXVXXPXGGVXSTPPPARXNILPTXAPAXXXTLQXPXGPXRXPXPXPPPXXPX 778
P PP P + + P T P R +I P +PA + P P PPP P
Sbjct: 128 PAPPTPQSELRPP------TSAPPRPSI-PPPSPASAPPIPSKAPPI--PSSLPPPAQP- 177
Query: 779 XWASXXXXTPPPPRKXXQXXPPSXGRXGPPPXTK 880
+ +PP PP + PPP ++
Sbjct: 178 ---AAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQ 208
Score = 30.3 bits (65), Expect = 0.45
Identities = 24/85 (28%), Positives = 26/85 (30%), Gaps = 2/85 (2%)
Frame = +2
Query: 686 PTXAPAXXXTLQXPXGPXRXPXPXP--PPXXPXXWASXXXXTPPPPRKXXQXXPPSXGRX 859
P APA T Q P P P PP P PP P P+
Sbjct: 124 PPSAPAPP-TPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVK 182
Query: 860 GPPPXTKXNXSXXXPPXXXPPPHLS 934
PP + P PPP LS
Sbjct: 183 SPPSAPSLPSAVPPMPPKVPPPPLS 207
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 30.3 bits (65), Expect = 0.45
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 751 PXTPPEXPPXXGLLXXXNPPPPP 819
P PP PP G PPPPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPP 28
Score = 29.5 bits (63), Expect = 0.78
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Frame = +3
Query: 747 PXRNPPRXAPXXG--PPXXXXPPPPP 818
P NPP P G PP PPPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 25.8 bits (54), Expect = 9.6
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 785 ASXXXXTPPPPRKXXQXXPPSXGRXGPPP 871
AS PPPP PPS PPP
Sbjct: 2 ASLPPGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 30.3 bits (65), Expect = 0.45
Identities = 19/61 (31%), Positives = 20/61 (32%)
Frame = -3
Query: 868 GGPXPPXGGGXXLXXFAGGGGGXXXXGGPXXGAXRGGXRXGXXXGPXGXLQXXXXRGXXG 689
G P G G G GG GG G GG R G G G + G G
Sbjct: 129 GARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRG 188
Query: 688 G 686
G
Sbjct: 189 G 189
Score = 27.9 bits (59), Expect = 2.4
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = -3
Query: 880 FXXGGGPXPPXGGGXXLXXFAGGGGGXXXXGGPXXGAXRGGXRXGXXXGPXG 725
F G G GG F GG G GG G RGG R G G G
Sbjct: 143 FRGGRGGSRGGFGGNSRGGFGGGSRGGF--GGGSRGGSRGGFRGGSRGGFRG 192
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 29.9 bits (64), Expect = 0.59
Identities = 14/58 (24%), Positives = 21/58 (36%)
Frame = +2
Query: 752 PXPPPXXPXXWASXXXXTPPPPRKXXQXXPPSXGRXGPPPXTKXNXSXXXPPXXXPPP 925
P PPP ++ +PPPP+ PP+ PP + + P P
Sbjct: 908 PPPPPTASMTASAPAIASPPPPKVGETYHPPTASGTRVPPVQQPSHPNPYTPVAPQSP 965
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 28.3 bits (60), Expect = 1.8
Identities = 26/74 (35%), Positives = 26/74 (35%), Gaps = 4/74 (5%)
Frame = -3
Query: 991 GGKGXGVXXXFCGVXRXXXXXVGGXGXAGGXXXAXVXFXXGGGPXPPXGGGXXLXXFAGG 812
G G G F G G G GG F GGGP G G L F GG
Sbjct: 203 GPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGF--GGGPG---GFGGGLGGFGGG 257
Query: 811 ----GGGXXXXGGP 782
GGG GGP
Sbjct: 258 PGGFGGGPGGHGGP 271
Score = 27.1 bits (57), Expect = 4.1
Identities = 20/52 (38%), Positives = 20/52 (38%)
Frame = -3
Query: 880 FXXGGGPXPPXGGGXXLXXFAGGGGGXXXXGGPXXGAXRGGXRXGXXXGPXG 725
F G G PP GG F G GG GG G GG G GP G
Sbjct: 193 FGGGSGGPPPGPGG--FGGFGGFGGEGHHHGG--HGGF-GGGPGGFEGGPGG 239
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 27.5 bits (58), Expect = 3.1
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = +2
Query: 596 PPXPPXPXTXVXXPXGGVXSTPPPARXNILPTXAPA 703
P P P T P PPP R +I P+ PA
Sbjct: 725 PQVTPAPPTPAPTPAVKHHPPPPPVRSSISPSMPPA 760
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 26.6 bits (56), Expect = 5.5
Identities = 19/60 (31%), Positives = 20/60 (33%)
Frame = -3
Query: 925 GGXGXAGGXXXAXVXFXXGGGPXPPXGGGXXLXXFAGGGGGXXXXGGPXXGAXRGGXRXG 746
G G GG F GGG GGG GG G G RGG + G
Sbjct: 13 GSRGGRGGFNGGRGGF--GGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.8 bits (54), Expect = 9.6
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +3
Query: 759 PPRXAPXXGPPXXXXPPPPP 818
PP P P PPPPP
Sbjct: 224 PPTYTPKQADPLPAPPPPPP 243
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.142 0.478
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,130,495
Number of Sequences: 5004
Number of extensions: 28651
Number of successful extensions: 151
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 93
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 519268360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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