Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_L16
(1002 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 31 0.071
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 30 0.094
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 29 0.29
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 28 0.38
AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein ... 26 2.0
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi... 26 2.0
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 24 8.2
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 30.7 bits (66), Expect = 0.071
Identities = 20/61 (32%), Positives = 22/61 (36%), Gaps = 5/61 (8%)
Frame = -3
Query: 925 GGXGXAGGXXXAXVXFXXGGGPXPPXGGGXX-----LXXFAGGGGGXXXXGGPXXGAXRG 761
GG G GG + F G P G G L +GG GG GG G G
Sbjct: 812 GGNGGGGGAGASGGGFLITGDPSDTIGAGGGGAGGPLRGSSGGAGGGSSGGGGSGGTSGG 871
Query: 760 G 758
G
Sbjct: 872 G 872
Score = 27.1 bits (57), Expect = 0.88
Identities = 22/77 (28%), Positives = 23/77 (29%)
Frame = -3
Query: 955 GVXRXXXXXVGGXGXAGGXXXAXVXFXXGGGPXPPXGGGXXLXXFAGGGGGXXXXGGPXX 776
GV GG G G GG GGG + G G G G
Sbjct: 507 GVVVNAVLAAGGGGGGSGCVNGSRTVGAGG----MAGGGSDGPEYEGAGRGGVGSGIGGG 562
Query: 775 GAXRGGXRXGXXXGPXG 725
G GG R G G G
Sbjct: 563 GGGGGGGRAGGGVGATG 579
Score = 24.2 bits (50), Expect = 6.2
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = +2
Query: 299 GXXXPPPXGGGAXPPXKKTTCXSXXPP 379
G PPP G G+ K + S PP
Sbjct: 764 GGGGPPPDGSGSGSRCSKPSVTSTTPP 790
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 30.3 bits (65), Expect = 0.094
Identities = 19/57 (33%), Positives = 22/57 (38%)
Frame = +2
Query: 596 PPXPPXPXTXVXXPXGGVXSTPPPARXNILPTXAPAXXXTLQXPXGPXRXPXPXPPP 766
PP P P P GG + PP N+L A T+ P P P P P P
Sbjct: 589 PPMGPPPSPLAGGPLGGPAGSRPPL-PNLLGFGGAAPPVTILVPY-PIIIPLPLPIP 643
Score = 28.7 bits (61), Expect = 0.29
Identities = 30/103 (29%), Positives = 33/103 (32%), Gaps = 6/103 (5%)
Frame = +2
Query: 641 GGVXSTPPP-----ARXNILPTXAPAXXXTLQXPXGPXRXPXPXPPPXXPXXWASXXXXT 805
GG PPP A NI P P L+ P P P P +
Sbjct: 525 GGPLGPPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPA 584
Query: 806 PPPPRKXXQXXPPSXGRXGPPPXTKXNXSXXXPPXXXPP-PHL 931
PPPP PP GPPP P PP P+L
Sbjct: 585 PPPP-------PP----MGPPPSPLAGGPLGGPAGSRPPLPNL 616
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 28.7 bits (61), Expect = 0.29
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 856 PPXGGGXXLXXFAGGGGGXXXXGGPXXGAXRGG 758
P GGG GGGGG GP G GG
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGPGPGGGGGGGG 232
Score = 25.8 bits (54), Expect = 2.0
Identities = 20/58 (34%), Positives = 20/58 (34%), Gaps = 2/58 (3%)
Frame = -3
Query: 925 GGXGXAGGXXXAXVXFXXGGG--PXPPXGGGXXLXXFAGGGGGXXXXGGPXXGAXRGG 758
GG G AG A P GG A GGGG GGP G GG
Sbjct: 174 GGGGGAGSFAAALRNLAKQADVKEDEPGAGGGGSGGGAPGGGG-GSSGGPGPGGGGGG 230
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 28.3 bits (60), Expect = 0.38
Identities = 28/116 (24%), Positives = 30/116 (25%), Gaps = 3/116 (2%)
Frame = +2
Query: 584 GXXXPPXPPXPXTXVXXPXGGVXSTPPPARXNILPTXAPAXXXTLQXPXGPXRXP-XPXP 760
G P PP P P G P +P P G R P P
Sbjct: 204 GTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRPPMMGQP 263
Query: 761 PPXXPXXWASXXXXTPPPPRKXXQXXPPSXGRXGP--PPXTKXNXSXXXPPXXXPP 922
PP P P PS G GP PP + PP P
Sbjct: 264 PPIRPPNPMGGPRPQISPQNSNLSGGMPS-GMVGPPRPPMPMQGGAPGGPPQGMRP 318
>AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein
protein.
Length = 596
Score = 25.8 bits (54), Expect = 2.0
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -3
Query: 847 GGGXXLXXFAGGGGGXXXXGGPXXGAXRGGXRXGXXXGPXG 725
GGG G GG GG G RGG G G G
Sbjct: 58 GGGDDGYGGGGRGGRGGRGGGRGRGRGRGGRDGGGGFGGGG 98
>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
topoisomerase protein.
Length = 1039
Score = 25.8 bits (54), Expect = 2.0
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -3
Query: 871 GGGPXPPXGGGXXLXXFAGGGGGXXXXGG 785
GGG GG GGGGG GG
Sbjct: 183 GGGELTTGGGTNGCTKAGGGGGGTGTGGG 211
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 23.8 bits (49), Expect = 8.2
Identities = 14/56 (25%), Positives = 16/56 (28%)
Frame = -3
Query: 925 GGXGXAGGXXXAXVXFXXGGGPXPPXGGGXXLXXFAGGGGGXXXXGGPXXGAXRGG 758
GG G G GGG GG + + G GG G G
Sbjct: 661 GGGGSVGSGGIGSSSLGGGGGSGRSSSGGGMIGMHSVAAGAAVAAGGGVAGMMSTG 716
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.317 0.142 0.478
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 632,564
Number of Sequences: 2352
Number of extensions: 11167
Number of successful extensions: 93
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 110174532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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