Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_L12
         (961 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0066 - 537729-538163                                            132   4e-31
10_07_0174 + 13815478-13815903                                        132   5e-31
03_02_0943 + 12598616-12598789,12599790-12601250                       32   0.59 

>03_01_0066 - 537729-538163
          Length = 144

 Score =  132 bits (319), Expect = 4e-31
 Identities = 63/106 (59%), Positives = 84/106 (79%)
 Frame = +1

Query: 145 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGXSIKLQEE 324
           IEKYY+R+TLDF TNK++ EE++I+P+K LRNK+AGF+THLMRR++   VRG S+KLQEE
Sbjct: 17  IEKYYSRMTLDFHTNKKVLEEVSILPSKRLRNKVAGFSTHLMRRIQRGPVRGISLKLQEE 76

Query: 325 ERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 462
           ERERR ++VP+ SALE D I VD +T DML  L   ++ G+ + QP
Sbjct: 77  ERERRMDFVPDRSALEVDDIRVDKETLDMLTSLGMADLPGV-VRQP 121


>10_07_0174 + 13815478-13815903
          Length = 141

 Score =  132 bits (318), Expect = 5e-31
 Identities = 61/105 (58%), Positives = 82/105 (78%)
 Frame = +1

Query: 145 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGXSIKLQEE 324
           IEKYY+R+TLDF TNK++ EE++I+P+K LRNK+AGF THLMRR++   VRG S+KLQEE
Sbjct: 17  IEKYYSRMTLDFHTNKKVLEEVSILPSKRLRNKVAGFTTHLMRRIQRGPVRGISLKLQEE 76

Query: 325 ERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQ 459
           ERERR ++VPE SALE + I VD +T +ML  L   ++ G++  Q
Sbjct: 77  ERERRMDFVPEKSALEVEEIRVDKETMEMLAALGMADLPGVERQQ 121


>03_02_0943 + 12598616-12598789,12599790-12601250
          Length = 544

 Score = 32.3 bits (70), Expect = 0.59
 Identities = 19/60 (31%), Positives = 35/60 (58%)
 Frame = +1

Query: 247 AGFATHLMRRLRHSQVRGXSIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLD 426
           A +++HL+RR+        + K Q EE ++  +   + + LEHD+I  + +T D+LK L+
Sbjct: 41  AAWSSHLIRRM----FAPPNPKEQSEESKQPVDIKEQAAQLEHDLIIKEKETLDVLKELE 96


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,601,140
Number of Sequences: 37544
Number of extensions: 197365
Number of successful extensions: 513
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 513
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2776393380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)