Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_L07
         (869 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0160 + 28086804-28087499                                         28   8.5  
02_03_0004 + 13859005-13859081,13859554-13859723,13859989-13860029     28   8.5  
02_03_0002 - 13687291-13687331,13687597-13687766,13688239-13688315     28   8.5  

>05_07_0160 + 28086804-28087499
          Length = 231

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +3

Query: 324 VKCLCTGLLIGAMRPPLFGRPRS 392
           V C+  G  IGA+  P+FGRPRS
Sbjct: 40  VTCVVGGGRIGAVVYPVFGRPRS 62


>02_03_0004 + 13859005-13859081,13859554-13859723,13859989-13860029
          Length = 95

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 12/23 (52%), Positives = 18/23 (78%)
 Frame = +3

Query: 390 SVRTKKVVKAVRERIRRDPVRKQ 458
           S+ T+KV KA RE++RRD + +Q
Sbjct: 36  SIATRKVQKADREKMRRDRLNEQ 58


>02_03_0002 - 13687291-13687331,13687597-13687766,13688239-13688315
          Length = 95

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 12/23 (52%), Positives = 18/23 (78%)
 Frame = +3

Query: 390 SVRTKKVVKAVRERIRRDPVRKQ 458
           S+ T+KV KA RE++RRD + +Q
Sbjct: 36  SIATRKVQKADREKMRRDRLNEQ 58


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,323,852
Number of Sequences: 37544
Number of extensions: 321567
Number of successful extensions: 613
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 613
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)