Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_L04
         (910 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00001-1|AAA60471.1|  823|Homo sapiens CDC27 protein.                  96   1e-19
S78234-1|AAB34378.1|  824|Homo sapiens H-NUC protein.                  96   1e-19
BC011656-1|AAH11656.1|  830|Homo sapiens CDC27 protein protein.        96   1e-19
AY518321-1|AAR89911.1|  824|Homo sapiens cell division cycle 27 ...    96   1e-19

>U00001-1|AAA60471.1|  823|Homo sapiens CDC27 protein.
          Length = 823

 Score = 96.3 bits (229), Expect = 1e-19
 Identities = 47/121 (38%), Positives = 68/121 (56%), Gaps = 7/121 (5%)
 Frame = +1

Query: 370 GRINEAHHLLQNKTLALPQARFLLAKCSADLKSYKDAEIALGSNL-------DIIASEFG 528
           G+  +A+ LL+  +   PQ ++LLAKC  DL    + E  L   +       D I +EFG
Sbjct: 52  GKAYKAYRLLKGHSCTTPQCKYLLAKCCVDLSKLAEGEQILSGGVFNKQKSHDDIVTEFG 111

Query: 529 EQAPYALQLLAKVYISTGRRNEAAEAHRKALSLNPFMWKSFAQLCNMGEKVDPQQVFQIN 708
           + A + L LL  VY  T R  + +E ++K+LSLNPF+W  F  LC +GEK DP Q F+  
Sbjct: 112 DSACFTLSLLGHVYCKTDRLAKGSECYQKSLSLNPFLWSPFESLCEIGEKPDPDQTFKFT 171

Query: 709 N 711
           +
Sbjct: 172 S 172



 Score = 80.6 bits (190), Expect = 7e-15
 Identities = 33/50 (66%), Positives = 41/50 (82%)
 Frame = +3

Query: 222 IVQEPIQVIVWDCLNNYEFENAIFLAERLYAEVGSEEAAFLLGTCYYRSG 371
           ++QEP+Q  +W  LN+Y + +A+FLAERLYAEV SEEA FLL TCYYRSG
Sbjct: 3   VLQEPVQAAIWQALNHYAYRDAVFLAERLYAEVHSEEALFLLATCYYRSG 52


>S78234-1|AAB34378.1|  824|Homo sapiens H-NUC protein.
          Length = 824

 Score = 96.3 bits (229), Expect = 1e-19
 Identities = 47/121 (38%), Positives = 68/121 (56%), Gaps = 7/121 (5%)
 Frame = +1

Query: 370 GRINEAHHLLQNKTLALPQARFLLAKCSADLKSYKDAEIALGSNL-------DIIASEFG 528
           G+  +A+ LL+  +   PQ ++LLAKC  DL    + E  L   +       D I +EFG
Sbjct: 52  GKAYKAYRLLKGHSCTTPQCKYLLAKCCVDLSKLAEGEQILSGGVFNKQKSHDDIVTEFG 111

Query: 529 EQAPYALQLLAKVYISTGRRNEAAEAHRKALSLNPFMWKSFAQLCNMGEKVDPQQVFQIN 708
           + A + L LL  VY  T R  + +E ++K+LSLNPF+W  F  LC +GEK DP Q F+  
Sbjct: 112 DSACFTLSLLGHVYCKTDRLAKGSECYQKSLSLNPFLWSPFESLCEIGEKPDPDQTFKFT 171

Query: 709 N 711
           +
Sbjct: 172 S 172



 Score = 80.6 bits (190), Expect = 7e-15
 Identities = 33/50 (66%), Positives = 41/50 (82%)
 Frame = +3

Query: 222 IVQEPIQVIVWDCLNNYEFENAIFLAERLYAEVGSEEAAFLLGTCYYRSG 371
           ++QEP+Q  +W  LN+Y + +A+FLAERLYAEV SEEA FLL TCYYRSG
Sbjct: 3   VLQEPVQAAIWQALNHYAYRDAVFLAERLYAEVHSEEALFLLATCYYRSG 52


>BC011656-1|AAH11656.1|  830|Homo sapiens CDC27 protein protein.
          Length = 830

 Score = 96.3 bits (229), Expect = 1e-19
 Identities = 47/121 (38%), Positives = 68/121 (56%), Gaps = 7/121 (5%)
 Frame = +1

Query: 370 GRINEAHHLLQNKTLALPQARFLLAKCSADLKSYKDAEIALGSNL-------DIIASEFG 528
           G+  +A+ LL+  +   PQ ++LLAKC  DL    + E  L   +       D I +EFG
Sbjct: 52  GKAYKAYRLLKGHSCTTPQCKYLLAKCCVDLSKLAEGEQILSGGVFNKQKSHDDIVTEFG 111

Query: 529 EQAPYALQLLAKVYISTGRRNEAAEAHRKALSLNPFMWKSFAQLCNMGEKVDPQQVFQIN 708
           + A + L LL  VY  T R  + +E ++K+LSLNPF+W  F  LC +GEK DP Q F+  
Sbjct: 112 DSACFTLSLLGHVYCKTDRLAKGSECYQKSLSLNPFLWSPFESLCEIGEKPDPDQTFKFT 171

Query: 709 N 711
           +
Sbjct: 172 S 172



 Score = 80.6 bits (190), Expect = 7e-15
 Identities = 33/50 (66%), Positives = 41/50 (82%)
 Frame = +3

Query: 222 IVQEPIQVIVWDCLNNYEFENAIFLAERLYAEVGSEEAAFLLGTCYYRSG 371
           ++QEP+Q  +W  LN+Y + +A+FLAERLYAEV SEEA FLL TCYYRSG
Sbjct: 3   VLQEPVQAAIWQALNHYAYRDAVFLAERLYAEVHSEEALFLLATCYYRSG 52


>AY518321-1|AAR89911.1|  824|Homo sapiens cell division cycle 27
           protein.
          Length = 824

 Score = 96.3 bits (229), Expect = 1e-19
 Identities = 47/121 (38%), Positives = 68/121 (56%), Gaps = 7/121 (5%)
 Frame = +1

Query: 370 GRINEAHHLLQNKTLALPQARFLLAKCSADLKSYKDAEIALGSNL-------DIIASEFG 528
           G+  +A+ LL+  +   PQ ++LLAKC  DL    + E  L   +       D I +EFG
Sbjct: 52  GKAYKAYRLLKGHSCTTPQCKYLLAKCCVDLSKLAEGEQILSGGVFNKQKSHDDIVTEFG 111

Query: 529 EQAPYALQLLAKVYISTGRRNEAAEAHRKALSLNPFMWKSFAQLCNMGEKVDPQQVFQIN 708
           + A + L LL  VY  T R  + +E ++K+LSLNPF+W  F  LC +GEK DP Q F+  
Sbjct: 112 DSACFTLSLLGHVYCKTDRLAKGSECYQKSLSLNPFLWSPFESLCEIGEKPDPDQTFKFT 171

Query: 709 N 711
           +
Sbjct: 172 S 172



 Score = 80.6 bits (190), Expect = 7e-15
 Identities = 33/50 (66%), Positives = 41/50 (82%)
 Frame = +3

Query: 222 IVQEPIQVIVWDCLNNYEFENAIFLAERLYAEVGSEEAAFLLGTCYYRSG 371
           ++QEP+Q  +W  LN+Y + +A+FLAERLYAEV SEEA FLL TCYYRSG
Sbjct: 3   VLQEPVQAAIWQALNHYAYRDAVFLAERLYAEVHSEEALFLLATCYYRSG 52


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,966,154
Number of Sequences: 237096
Number of extensions: 2488824
Number of successful extensions: 4613
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4609
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11770329464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)