Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_L04
         (910 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U18298-1|AAA57340.1|  875|Drosophila melanogaster CDC27Dm protein.     99   4e-21
BT021947-1|AAX51652.1|  900|Drosophila melanogaster LD12661p pro...    99   4e-21
AE014296-1216|AAF50592.1|  900|Drosophila melanogaster CG8610-PA...    99   4e-21

>U18298-1|AAA57340.1|  875|Drosophila melanogaster CDC27Dm protein.
          Length = 875

 Score =   99 bits (238), Expect = 4e-21
 Identities = 51/122 (41%), Positives = 77/122 (63%), Gaps = 7/122 (5%)
 Frame = +1

Query: 373 RINEAHHLLQNKTLALPQARFLLAKCSADLKSYKDAEIALGS-------NLDIIASEFGE 531
           ++++A+ LL+ K    PQ RFL AKC+ +LK Y +AE AL S       N D +  +FG+
Sbjct: 52  QVHQAYWLLKEKARRSPQCRFLQAKCAYELKKYAEAESALISTGFADAKNCDELQRDFGD 111

Query: 532 QAPYALQLLAKVYISTGRRNEAAEAHRKALSLNPFMWKSFAQLCNMGEKVDPQQVFQINN 711
            A +A QL+A++ + T R   A  A R+AL LNPFMW +FA LC +G+  D   +FQI++
Sbjct: 112 LACFAYQLMAQICMRTERNKLAVSALRRALKLNPFMWHAFADLCLLGQDTDAAAIFQIHS 171

Query: 712 SE 717
           ++
Sbjct: 172 TD 173



 Score = 70.5 bits (165), Expect = 3e-12
 Identities = 28/50 (56%), Positives = 40/50 (80%)
 Frame = +3

Query: 219 MIVQEPIQVIVWDCLNNYEFENAIFLAERLYAEVGSEEAAFLLGTCYYRS 368
           M++QEP+Q  +W CLN Y+F++A+FL+ERL +EV S+E  FLL T Y+RS
Sbjct: 1   MMIQEPVQAAIWHCLNYYDFKDAVFLSERLCSEVESDETIFLLATSYFRS 50


>BT021947-1|AAX51652.1|  900|Drosophila melanogaster LD12661p
           protein.
          Length = 900

 Score =   99 bits (238), Expect = 4e-21
 Identities = 51/122 (41%), Positives = 77/122 (63%), Gaps = 7/122 (5%)
 Frame = +1

Query: 373 RINEAHHLLQNKTLALPQARFLLAKCSADLKSYKDAEIALGS-------NLDIIASEFGE 531
           ++++A+ LL+ K    PQ RFL AKC+ +LK Y +AE AL S       N D +  +FG+
Sbjct: 52  QVHQAYWLLKEKARRSPQCRFLQAKCAYELKKYAEAESALISTGFADAKNCDELQRDFGD 111

Query: 532 QAPYALQLLAKVYISTGRRNEAAEAHRKALSLNPFMWKSFAQLCNMGEKVDPQQVFQINN 711
            A +A QL+A++ + T R   A  A R+AL LNPFMW +FA LC +G+  D   +FQI++
Sbjct: 112 LACFAYQLMAQICMRTERNKLAVSALRRALKLNPFMWHAFADLCLLGQDTDAAAIFQIHS 171

Query: 712 SE 717
           ++
Sbjct: 172 TD 173



 Score = 70.5 bits (165), Expect = 3e-12
 Identities = 28/50 (56%), Positives = 40/50 (80%)
 Frame = +3

Query: 219 MIVQEPIQVIVWDCLNNYEFENAIFLAERLYAEVGSEEAAFLLGTCYYRS 368
           M++QEP+Q  +W CLN Y+F++A+FL+ERL +EV S+E  FLL T Y+RS
Sbjct: 1   MMIQEPVQAAIWHCLNYYDFKDAVFLSERLCSEVESDETIFLLATSYFRS 50


>AE014296-1216|AAF50592.1|  900|Drosophila melanogaster CG8610-PA
           protein.
          Length = 900

 Score =   99 bits (238), Expect = 4e-21
 Identities = 51/122 (41%), Positives = 77/122 (63%), Gaps = 7/122 (5%)
 Frame = +1

Query: 373 RINEAHHLLQNKTLALPQARFLLAKCSADLKSYKDAEIALGS-------NLDIIASEFGE 531
           ++++A+ LL+ K    PQ RFL AKC+ +LK Y +AE AL S       N D +  +FG+
Sbjct: 52  QVHQAYWLLKEKARRSPQCRFLQAKCAYELKKYAEAESALISTGFADAKNCDELQRDFGD 111

Query: 532 QAPYALQLLAKVYISTGRRNEAAEAHRKALSLNPFMWKSFAQLCNMGEKVDPQQVFQINN 711
            A +A QL+A++ + T R   A  A R+AL LNPFMW +FA LC +G+  D   +FQI++
Sbjct: 112 LACFAYQLMAQICMRTERNKLAVSALRRALKLNPFMWHAFADLCLLGQDTDAAAIFQIHS 171

Query: 712 SE 717
           ++
Sbjct: 172 TD 173



 Score = 70.5 bits (165), Expect = 3e-12
 Identities = 28/50 (56%), Positives = 40/50 (80%)
 Frame = +3

Query: 219 MIVQEPIQVIVWDCLNNYEFENAIFLAERLYAEVGSEEAAFLLGTCYYRS 368
           M++QEP+Q  +W CLN Y+F++A+FL+ERL +EV S+E  FLL T Y+RS
Sbjct: 1   MMIQEPVQAAIWHCLNYYDFKDAVFLSERLCSEVESDETIFLLATSYFRS 50


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,809,573
Number of Sequences: 53049
Number of extensions: 789118
Number of successful extensions: 2392
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2373
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4443987051
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)