Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_L02
         (867 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    24   1.3  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    24   1.3  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    23   4.1  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    23   4.1  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   5.4  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   7.2  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   7.2  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    22   7.2  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    22   7.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.5  

>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -2

Query: 794 VSERGSGRAPKNANRLSPRVGRFINAEKTSHT 699
           + ER  G+ P+     +   G   NA+ TSHT
Sbjct: 33  IDERDGGKPPELTGSTNGDGGARSNADSTSHT 64


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -2

Query: 794 VSERGSGRAPKNANRLSPRVGRFINAEKTSHT 699
           + ER  G+ P+     +   G   NA+ TSHT
Sbjct: 189 IDERDGGKPPELTGSTNGDGGARSNADSTSHT 220


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 603 NFTNKAFFSLH 571
           NF NKAFF  H
Sbjct: 20  NFNNKAFFCFH 30


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 603 NFTNKAFFSLH 571
           NF NKAFF  H
Sbjct: 20  NFNNKAFFCFH 30


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -1

Query: 87  NVFTNRLQESTNIKILRN 34
           NVF   LQE    KI+RN
Sbjct: 244 NVFKTTLQEREKKKIIRN 261


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 13/58 (22%), Positives = 28/58 (48%)
 Frame = +3

Query: 237 REKVESALAPXDC*EKLWHDGRQLQRIL*KSEARGSTESLRSNFLVSKYITPNISNVI 410
           R ++ SAL   +   K+W   R++++     E     E + ++   S   +P+ +N+I
Sbjct: 283 RIEIASALQLNETQVKIWFQNRRMKQKKRMKEGLIPPEPISASLSTSNSNSPSSTNLI 340


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -1

Query: 117 SAACSFWIFENVFTNRLQESTNIKIL 40
           +A C  W+ ++VF  R   + N++ L
Sbjct: 446 NALCMTWLMDHVFAIREAATLNLRKL 471


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 13/58 (22%), Positives = 28/58 (48%)
 Frame = +3

Query: 237 REKVESALAPXDC*EKLWHDGRQLQRIL*KSEARGSTESLRSNFLVSKYITPNISNVI 410
           R ++ SAL   +   K+W   R++++     E     E + ++   S   +P+ +N+I
Sbjct: 72  RIEIASALQLNETQVKIWFQNRRMKQKKRMKEGLIPPEPISASLSTSNSNSPSSTNLI 129


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 13/58 (22%), Positives = 28/58 (48%)
 Frame = +3

Query: 237 REKVESALAPXDC*EKLWHDGRQLQRIL*KSEARGSTESLRSNFLVSKYITPNISNVI 410
           R ++ SAL   +   K+W   R++++     E     E + ++   S   +P+ +N+I
Sbjct: 72  RIEIASALQLNETQVKIWFQNRRMKQKKRMKEGLIPPEPISASLSTSNSNSPSSTNLI 129


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = +1

Query: 727 NRPTRGERRFAFLGALPLPRSLTR 798
           N+P   +        +PLPR L R
Sbjct: 439 NKPNSSDLNMLIKETMPLPRKLVR 462


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,921
Number of Sequences: 336
Number of extensions: 3192
Number of successful extensions: 22
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23893023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)