Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_L01
(890 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_1083 + 11096520-11096664,11097543-11097592,11097682-110977... 148 5e-36
04_04_1169 - 31446291-31446395,31446789-31446918,31447047-314471... 36 0.033
12_01_0133 - 1011442-1011609,1011792-1011906,1012188-1012279,101... 31 1.6
11_01_0130 - 1079515-1079685,1079847-1079961,1080237-1080328,108... 31 1.6
04_03_0867 - 20414999-20415160,20415255-20415384,20415515-204157... 29 5.0
11_04_0351 + 16666398-16666532,16666911-16667048,16667398-166683... 29 6.6
02_05_1298 - 35542250-35542831,35543218-35543410,35543511-355438... 29 6.6
>08_01_1083 +
11096520-11096664,11097543-11097592,11097682-11097754,
11099122-11099201,11099354-11099505,11100653-11100812,
11100886-11100933,11101118-11101198,11101517-11101597
Length = 289
Score = 148 bits (359), Expect = 5e-36
Identities = 69/173 (39%), Positives = 110/173 (63%)
Frame = +3
Query: 261 EEAVDCYLRAANLFKMAKKWPQAGQAFCNAAQLHLKAGVRHDAATNFVDASNCYKKCDAN 440
E+A D + + AN FK+AK W +A Q + A HLK +H+AA+ +V+A+NCYKK
Sbjct: 30 EDAADLFDKGANSFKLAKNWSRAAQVYIKIANCHLKGDSKHEAASAYVEAANCYKKFSPQ 89
Query: 441 EAVSCLLKAIEIYTDMGRFTVAAKQHQNIAELYETECVDLARAMQHYEQAADYFRGEEST 620
EA L +A++++ ++GR +AA+ ++I E+Y E DL +A + E++AD F E +
Sbjct: 90 EAAQALNQAVDLFLEIGRLNMAARYCKDIGEIYHQE-QDLEKASDYLEKSADLFDSEGQS 148
Query: 621 SSANKCMLKLAQYAAQLEHYDKAIQIYEQIAKSSLDNSLLKYSAKEYMFRAAL 779
S +N K+A+ AAQLE Y KA +I+E IA+ ++N+LLKYS + + A +
Sbjct: 149 SQSNSIKQKVAEIAAQLEQYQKANEIFEAIARQQINNNLLKYSVRGILLNAGI 201
>04_04_1169 -
31446291-31446395,31446789-31446918,31447047-31447126,
31447396-31447474,31448178-31448315,31448386-31448522
Length = 222
Score = 36.3 bits (80), Expect = 0.033
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +3
Query: 261 EEAVDCYLRAANLFKMAKKWPQAGQAFCNAAQLHLKAGVRHDAATNFVDASNCYKKCDA- 437
+EA+ Y A ++ + K A + AA L++K DAA F+ + KC+A
Sbjct: 54 DEAIKMYDEACSILEEDGKEQMAFDLYRAAASLYVKLEKYSDAAATFLRLGSAADKCNAI 113
Query: 438 NEAVSCLLKAIEIYTDMGRFTVAAKQHQNIAEL 536
N L AI IY F A K + + +E+
Sbjct: 114 NSQCKGYLSAIIIYLYAHDFQQAQKCYNDCSEV 146
>12_01_0133 -
1011442-1011609,1011792-1011906,1012188-1012279,
1012384-1012469,1012989-1013088,1014139-1014333
Length = 251
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +3
Query: 513 QHQNIAELYETECVDLARAMQHYEQAADYFRGEESTSSANKCMLKLAQYAAQLEHY-DKA 689
+ Q + L + EC +A E+A DY + ++ S+A +C+ K Y Q+E +
Sbjct: 63 EDQTLEMLEKKECFLQKKASAEVERAKDYTKA-KNKSAAIQCLKKKKLYETQIEQLANFQ 121
Query: 690 IQIYEQI 710
+++++QI
Sbjct: 122 LRVHDQI 128
>11_01_0130 -
1079515-1079685,1079847-1079961,1080237-1080328,
1080435-1080520,1080957-1081056,1082180-1082210,
1082416-1082471
Length = 216
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +3
Query: 507 AKQHQNIAELYETECVDLARAMQHYEQAADYFRGEESTSSANKCMLKLAQYAAQLEHY-D 683
+K + + L + EC +A E+A DY + ++ S+A +C+ K Y Q+E +
Sbjct: 25 SKNPETLEMLEKKECFLQKKASAEVEKAKDYTKA-KNKSAAIQCLKKKKLYETQIEQLAN 83
Query: 684 KAIQIYEQI 710
+++++QI
Sbjct: 84 FQLRVHDQI 92
>04_03_0867 -
20414999-20415160,20415255-20415384,20415515-20415702,
20415967-20416001,20416363-20416579,20416737-20416820,
20417609-20417875,20417954-20418061,20418163-20418249,
20418629-20419399
Length = 682
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = -2
Query: 508 AATVKRPISV*ISIAFRRQDTASLASHFL*QLEASTKLVAASWRTPAFKWSCAALQKAC 332
A T+ P + + +FR + TA+ S + + VA W+T W+CAA C
Sbjct: 91 ARTLALPATPASACSFRLRATAARDSPLPSLFDEAFPFVAVEWKTIVKGWACAAAAVYC 149
>11_04_0351 +
16666398-16666532,16666911-16667048,16667398-16668306,
16668383-16668511,16668774-16668996,16669085-16669231,
16669332-16669573,16669660-16669689,16669784-16669865,
16669968-16670128,16670775-16670898,16671206-16671414
Length = 842
Score = 28.7 bits (61), Expect = 6.6
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +3
Query: 276 CYLRAANLFKMAKKWPQAGQAFCNAAQLHLKAGV-RHDAATNFVDASNCYKKC-DANEAV 449
C A + K P +AF ++ L+ G+ +H+ A N V Y KC D A
Sbjct: 115 CACFVAKVLANRAKAPLEAKAFVRRTKV-LRDGIWKHEDAANLVPGDIIYLKCGDIVPAN 173
Query: 450 SCLLKAIEIYT 482
+C+L +I T
Sbjct: 174 ACVLNMAQIDT 184
>02_05_1298 -
35542250-35542831,35543218-35543410,35543511-35543827,
35544144-35544186,35545845-35545900,35546028-35546102,
35546249-35546345,35546422-35546546,35547063-35547167,
35547295-35547432,35547758-35547831,35547995-35548065,
35548168-35548363,35548482-35548572,35549264-35549342,
35549431-35549491,35549745-35549814,35549913-35549987,
35550119-35550194,35550403-35550489,35550744-35550880,
35551000-35551063,35551351-35551415
Length = 958
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 868 LWCPPKGWIQRAVLLEGVLRVQYVDAPGGTRAARNMY 758
+W P+GW + A +L + V VD P G A M+
Sbjct: 766 IWVEPEGWKRLAPVLGELRHVTLVDLPEGCDIAWTMF 802
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,780,975
Number of Sequences: 37544
Number of extensions: 387016
Number of successful extensions: 1131
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1130
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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