Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_L01
(890 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53180-5|AAA96287.3| 295|Caenorhabditis elegans Hypothetical pr... 211 6e-55
AL132898-17|CAB60957.2| 299|Caenorhabditis elegans Hypothetical... 36 0.029
Z81476-3|CAB03922.3| 592|Caenorhabditis elegans Hypothetical pr... 34 0.16
Z19152-2|CAA79544.1| 1150|Caenorhabditis elegans Hypothetical pr... 29 3.4
U40409-4|AAA81387.1| 579|Caenorhabditis elegans Activator of g ... 29 3.4
AF039713-10|AAB96721.1| 691|Caenorhabditis elegans Hypothetical... 29 3.4
Z22178-3|CAA80159.3| 1027|Caenorhabditis elegans Hypothetical pr... 29 5.9
AF192400-1|AAF24233.1| 1027|Caenorhabditis elegans emb-30 protei... 29 5.9
AF077544-5|AAK39240.1| 398|Caenorhabditis elegans Aspartyl prot... 28 7.8
AF077542-13|AAC26302.1| 294|Caenorhabditis elegans Hypothetical... 28 7.8
>U53180-5|AAA96287.3| 295|Caenorhabditis elegans Hypothetical
protein D1014.3 protein.
Length = 295
Score = 211 bits (515), Expect = 6e-55
Identities = 102/210 (48%), Positives = 136/210 (64%), Gaps = 1/210 (0%)
Frame = +3
Query: 153 MADNEQKAMQLMAEAEXXXXXXXXXXXXXXXXXXXIEEAVDCYLRAANLFKMAKKWPQAG 332
M+DNE KA Q MAE EA D +++ NLFKMAK W AG
Sbjct: 1 MSDNEAKARQKMAEGRKKLSGGGGFLNRMFGGGGSNAEAADLFIQGGNLFKMAKNWQAAG 60
Query: 333 QAFCNAAQLHLKAG-VRHDAATNFVDASNCYKKCDANEAVSCLLKAIEIYTDMGRFTVAA 509
AF AA+ + K G +HD AT + +A+NC++K AV CL K EIYTDMGRFT+AA
Sbjct: 61 DAFLEAAEFYAKNGDSKHDCATQYAEAANCFRKIQPERAVQCLEKTSEIYTDMGRFTMAA 120
Query: 510 KQHQNIAELYETECVDLARAMQHYEQAADYFRGEESTSSANKCMLKLAQYAAQLEHYDKA 689
K H +IAELYETE D + ++HY+QAADY++GEE SSA+KC++K+A Y+A+LE Y +A
Sbjct: 121 KNHVSIAELYETELPDKEQCVKHYQQAADYYKGEEQKSSASKCLVKVAMYSAELEKYSQA 180
Query: 690 IQIYEQIAKSSLDNSLLKYSAKEYMFRAAL 779
I ++E+IA D+S LKY+AK + F+A L
Sbjct: 181 IAVFEEIAFFEADHSTLKYAAKGHFFQALL 210
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 791 CVDILNAQHALEKYSSLYPAFRGTPE 868
C+D +N Q AL+KY + P+F + E
Sbjct: 214 CIDPINTQQALQKYENASPSFTDSRE 239
>AL132898-17|CAB60957.2| 299|Caenorhabditis elegans Hypothetical
protein Y59A8B.8 protein.
Length = 299
Score = 36.3 bits (80), Expect = 0.029
Identities = 34/137 (24%), Positives = 62/137 (45%), Gaps = 2/137 (1%)
Frame = +3
Query: 303 KMAKKWPQAGQAFCNAAQLHLKAGVRHDAATNFVD-ASNCYKKC-DANEAVSCLLKAIEI 476
K A + + + + + LK D A + ++ AS CY+ D +A LLKA E
Sbjct: 8 KEAAECERKAEDCMKTSMIKLKFKPDFDGAASAMERASVCYRNAQDPKKAAGSLLKAAEY 67
Query: 477 YTDMGRFTVAAKQHQNIAELYETECVDLARAMQHYEQAADYFRGEESTSSANKCMLKLAQ 656
Y AAK + A L + + + A+ +E+A + + S +A + K A
Sbjct: 68 YEQNRNLFHAAKAREGAAMLLR-DIKEFSEAVVLFEKAINGYAESGSLDTAAMTVEKAAD 126
Query: 657 YAAQLEHYDKAIQIYEQ 707
+ ++ +A+QIY++
Sbjct: 127 -VLKNDNPKEALQIYQR 142
>Z81476-3|CAB03922.3| 592|Caenorhabditis elegans Hypothetical
protein C25F9.4 protein.
Length = 592
Score = 33.9 bits (74), Expect = 0.16
Identities = 26/102 (25%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Frame = +3
Query: 456 LLKAIEIYTD---MGRFTVAAKQHQNIAELYETECV------DLARAMQHYEQAADYFRG 608
+L AI YT + F + A+ ++I E+Y++ C D+ M+ + A F
Sbjct: 473 MLAAIVSYTKEFYIKHFKICAESDEDIEEMYDSFCAGFKNTSDVGLIMKIWVDAHFNF-- 530
Query: 609 EESTSSANKCMLKLAQYAAQLEHYDKAIQIYEQIAKSSLDNS 734
S S ++C + +E+++KAI+I E+ ++S++ S
Sbjct: 531 --SKSEQDRCFIGKTAMKNIIENFEKAIKIIEKATQTSIEES 570
>Z19152-2|CAA79544.1| 1150|Caenorhabditis elegans Hypothetical
protein B0464.2 protein.
Length = 1150
Score = 29.5 bits (63), Expect = 3.4
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Frame = +3
Query: 573 QHYEQAADYF-RGEESTSSANKCMLKLAQYAAQLEHYDKAIQIYEQIAK---SSLDNSLL 740
+++ A D F + ESTS L +A + E + A+Q+Y K D++L
Sbjct: 692 RNWNDARDVFSQVRESTSEFYDVWLNIAHVCMEREQWMAAVQMYSSAMKKFRKENDSTLQ 751
Query: 741 KYSAKEYMFRAALV 782
Y AK Y +RA ++
Sbjct: 752 HYLAKAY-YRANML 764
>U40409-4|AAA81387.1| 579|Caenorhabditis elegans Activator of g
protein signallingprotein 3, isoform a protein.
Length = 579
Score = 29.5 bits (63), Expect = 3.4
Identities = 35/163 (21%), Positives = 62/163 (38%), Gaps = 21/163 (12%)
Frame = +3
Query: 279 YLRAANLFKMAKKWPQAGQAFCNAAQLHLKAGVRHDAATNFVDASNCYKKCDA-NEAVSC 455
Y + N M K + QA + + G + A + + N +K A N+A++
Sbjct: 47 YCQLGNAHTMLKDYEQALKFHTYDILVERLLGNKEGEAKSCANLGNIFKMKGAYNDALTF 106
Query: 456 LLKAIEIYTDMGRFTVAAKQHQNIAELY--ETECVDL-----------ARAMQHYEQAAD 596
K ++ ++G + ++ + NIA +Y C L A A +E AA
Sbjct: 107 TFKQLDFAEELGDRVLKSRAYYNIATIYVERGRCTKLEAAEEKNDAKNAEATSDFENAAK 166
Query: 597 YF-------RGEESTSSANKCMLKLAQYAAQLEHYDKAIQIYE 704
YF E + +C L L YD++I ++
Sbjct: 167 YFMLNLEMSEKSEDALTMGRCYGSLGNTYYCLGDYDQSIHFHK 209
>AF039713-10|AAB96721.1| 691|Caenorhabditis elegans Hypothetical
protein F57B10.4 protein.
Length = 691
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +3
Query: 498 TVAAKQHQNIAELYET-ECVDLARAMQHYEQAADYFRGEESTSSANKCMLKLAQYAAQLE 674
+V++K+H A + T E L+ Q D+F + N + + A+ +
Sbjct: 555 SVSSKRHDPAASISATSEESILSGTTQDESMLNDFFNPTGTDEKLNDVEFSMTAHVAEFD 614
Query: 675 HYDKAIQIYEQIAKSS 722
+ KA + EQI KSS
Sbjct: 615 NRQKAKRAAEQIKKSS 630
>Z22178-3|CAA80159.3| 1027|Caenorhabditis elegans Hypothetical
protein F54C8.3 protein.
Length = 1027
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +3
Query: 567 AMQHYEQAADYFRGEESTSSANKCMLKLAQYAAQLEHYDKAIQI 698
A +H + RG+ STS+ N C + +++ L Y K IQ+
Sbjct: 391 ATKHMPEVCRIARGQLSTSARNLCFQR-CEFSTSLSRYAKFIQL 433
>AF192400-1|AAF24233.1| 1027|Caenorhabditis elegans emb-30 protein
protein.
Length = 1027
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +3
Query: 567 AMQHYEQAADYFRGEESTSSANKCMLKLAQYAAQLEHYDKAIQI 698
A +H + RG+ STS+ N C + +++ L Y K IQ+
Sbjct: 391 ATKHMPEVCRIARGQLSTSARNLCFQR-CEFSTSLSRYAKFIQL 433
>AF077544-5|AAK39240.1| 398|Caenorhabditis elegans Aspartyl
protease protein 3 protein.
Length = 398
Score = 28.3 bits (60), Expect = 7.8
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = -1
Query: 494 TTHIGVDLDRFQETGHGLVSITFLVTVRSIYKIGGSIMANTSFQVELCCITESLPCLRPL 315
TT+ +D +TG L++ V + +KIGG + N ++VE C SLP +
Sbjct: 267 TTYTSGPIDSIVDTGTSLLTGPTDVIKKIQHKIGGIPLFNGEYEVE-CSKIPSLPNITFN 325
Query: 314 LG 309
LG
Sbjct: 326 LG 327
>AF077542-13|AAC26302.1| 294|Caenorhabditis elegans Hypothetical
protein Y57G7A.10a protein.
Length = 294
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 627 ANKCMLKLAQYAAQLEHYDKAIQIYEQIAKSSLDNS 734
+N+ + A EHY KA+ IYE++ + +N+
Sbjct: 85 SNRVLKLKAMQLESTEHYQKALDIYERLVEDEPNNN 120
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,888,088
Number of Sequences: 27780
Number of extensions: 309637
Number of successful extensions: 922
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 919
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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