Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_K24
(878 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomy... 33 0.041
SPAC4A8.09c |cwf21||complexed with Cdc5 protein Cwf21 |Schizosac... 29 0.66
SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr 2... 29 0.66
SPBC1683.05 |||thiamine transporter |Schizosaccharomyces pombe|c... 29 1.2
SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces po... 28 1.5
SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|c... 27 4.7
SPBC582.08 |||alanine aminotransferase |Schizosaccharomyces pomb... 26 6.1
SPAC607.08c |||DUF726 family protein|Schizosaccharomyces pombe|c... 26 6.1
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 26 6.1
SPAC631.02 |||bromodomain protein|Schizosaccharomyces pombe|chr ... 26 6.1
SPAC2E1P3.04 |||copper amine oxidase |Schizosaccharomyces pombe|... 26 8.1
SPBC36B7.08c |||nucleosome assembly protein |Schizosaccharomyces... 26 8.1
SPBC1347.10 |cdc23|mcm10|MCM-associated protein Mcm10|Schizosacc... 26 8.1
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 8.1
>SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 542
Score = 33.5 bits (73), Expect = 0.041
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = -1
Query: 788 ASYLASARADCCNQASLTADQRACSEDNSCSRLGGGVYSRSILSLLAAFCSGNNSGILET 609
ASYL++A + N SLTAD A S ++S S + Y+ S ++ S N+S +
Sbjct: 458 ASYLSAAGSSATNAISLTADSNAVSRNSSASTMSTS-YTSGSGSSNSSGSSSNSSSKSSS 516
Query: 608 GGPS 597
G S
Sbjct: 517 GASS 520
>SPAC4A8.09c |cwf21||complexed with Cdc5 protein Cwf21
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 293
Score = 29.5 bits (63), Expect = 0.66
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = +1
Query: 604 PPVSRIPELLPEQKAANKDNIDLEYTPPPSREQLLSSLQARWSAVR----EAWLQQSARA 771
PP + I + + K + D D+E REQLL LQ + S + E+ LQ R
Sbjct: 102 PPKAIIKDEQSQSKTKSLDEADVEILVQKYREQLLKELQLQKSTEKGKNFESILQPQKRK 161
Query: 772 EAR 780
E R
Sbjct: 162 ETR 164
>SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 202
Score = 29.5 bits (63), Expect = 0.66
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +1
Query: 664 IDLEYT--PPPSREQLLSSLQARWSAVREAWLQQSARAEARYEATQK 798
ID +Y PPS EQL L+ R + A LQ+ RA A E ++K
Sbjct: 129 IDAQYVFLAPPSIEQLEVRLRGRGTENESAILQRLERARAEIEYSEK 175
>SPBC1683.05 |||thiamine transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 559
Score = 28.7 bits (61), Expect = 1.2
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Frame = +1
Query: 517 PKADYSKFGYDQPEDNEDIMTIDLPGPEGPPVSRIPELLPEQKAAN---KDNIDLEYTPP 687
PK+D KF E N D+ + + P R L + + ++ K+NIDL TPP
Sbjct: 4 PKSD-EKFDIGISEKNLDVGFGESSSVDVPVKGRFASFLKKLELSSGPEKENIDLRPTPP 62
Query: 688 PSREQLLSSLQARWS 732
R + WS
Sbjct: 63 DRRHYSALDIIYLWS 77
>SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2812
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 337 KRRQSDQDETYVSEEEDIHSQKQSQRQSYVLKLFDRSVD 453
K ++ D DE + EEEDI+ + R +L L + S++
Sbjct: 831 KPQEFDHDEYFSQEEEDIYRPENLIRNHQILGLMEGSLE 869
>SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 596
Score = 26.6 bits (56), Expect = 4.7
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = +1
Query: 511 NQPKADYSKFGYDQPEDNEDIMTIDLPGPEGPPVSRIPELLPEQKAANK 657
NQP Y YD+ D +D P P G R + + A+N+
Sbjct: 341 NQPLPSYQNSMYDRLYDGLSYSNLDTPLPSGATTPRRRDSMEPTYASNE 389
>SPBC582.08 |||alanine aminotransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 505
Score = 26.2 bits (55), Expect = 6.1
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -2
Query: 514 GLQSRLCRSDREGNPHQTVTSQHSDQTV*EHMTAAGIVFVSE 389
G+ RLC GNP S++S + V A GIV +++
Sbjct: 241 GINVRLCVVINPGNPTGACISENSMEKVLRFAKAKGIVLLAD 282
>SPAC607.08c |||DUF726 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 579
Score = 26.2 bits (55), Expect = 6.1
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 355 QDETYVSEEEDIHSQKQSQRQSYVLKLFDRSVD 453
Q+E Y S++ +SQK+ + + LFD S D
Sbjct: 527 QEEKYESKQRTYYSQKEQEEEIEQEVLFDASSD 559
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 26.2 bits (55), Expect = 6.1
Identities = 18/69 (26%), Positives = 31/69 (44%)
Frame = +1
Query: 580 IDLPGPEGPPVSRIPELLPEQKAANKDNIDLEYTPPPSREQLLSSLQARWSAVREAWLQQ 759
++ P PE PVS+ E EQK + + + TP S+ + S + + +E + Q
Sbjct: 425 VETPKPEAQPVSKPKESAEEQKPSKEPEVK-PTTPSASKVEEPSKKRDEDNHQKEETVTQ 483
Query: 760 SARAEARYE 786
R + E
Sbjct: 484 PKREKTPVE 492
>SPAC631.02 |||bromodomain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 727
Score = 26.2 bits (55), Expect = 6.1
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +1
Query: 253 ARGRLQGALMEILEP-ALDSDDSTELTPGKRRQSDQDETYVSEEED 387
A +++ E P AL + DST K S DET EE D
Sbjct: 178 ASNKIKSEASESASPSALQALDSTAAGSSKEHSSPHDETVKKEEND 223
>SPAC2E1P3.04 |||copper amine oxidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 712
Score = 25.8 bits (54), Expect = 8.1
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1
Query: 586 LPGPEGPPVSRIPELLPEQKAANKDNIDL 672
+P G P +PE + E+ A+ DN D+
Sbjct: 589 VPQTSGEPTKGLPEWIAEEPDASVDNTDI 617
>SPBC36B7.08c |||nucleosome assembly protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 244
Score = 25.8 bits (54), Expect = 8.1
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = +1
Query: 292 EPALDSDDSTELTPGKRRQSDQDETYVSEEEDIHSQKQSQ 411
E A D D+S +L + + ++DE E+++ S+K +
Sbjct: 203 EEASDEDESVDLEEDEEEEDEEDEEGDEEKQEPPSKKSKK 242
>SPBC1347.10 |cdc23|mcm10|MCM-associated protein
Mcm10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 593
Score = 25.8 bits (54), Expect = 8.1
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 681 TTTKPGAAVIFTASPLVGSEGSL 749
T+TK AV+FT+SP + S SL
Sbjct: 520 TSTKVSPAVVFTSSPRIFSPQSL 542
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.8 bits (54), Expect = 8.1
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 5/103 (4%)
Frame = +1
Query: 301 LDSDDSTELTPGKRRQSDQDETYVSEEEDIHSQKQSQRQSYVLKLFDRSVDLSQFDEDSP 480
L S + E+ PG+ ++ E + E+E + ++ + Y++K R+V+ + DE+
Sbjct: 13 LYSYEPQEINPGEEIPENEREISIVEDEIVCLLEKGEDDWYLVK---RNVNSNDDDEEIG 69
Query: 481 LYP---ICRAWIANQPKA--DYSKFGYDQPEDNEDIMTIDLPG 594
+ P I A + + KA DY++ D+ D T+D G
Sbjct: 70 IVPSNYITEAEPSTKMKALYDYTQQSVDEISFQAD-QTLDCYG 111
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.133 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,352,604
Number of Sequences: 5004
Number of extensions: 71845
Number of successful extensions: 261
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 261
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 440481800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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