Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_K23
(1254 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL357713-1|CAH73433.1| 1566|Homo sapiens arginine-glutamic acid ... 31 6.6
AL356072-3|CAH70517.1| 1298|Homo sapiens arginine-glutamic acid ... 31 6.6
AL356072-2|CAH70516.1| 1566|Homo sapiens arginine-glutamic acid ... 31 6.6
AL096855-2|CAI19209.1| 1298|Homo sapiens arginine-glutamic acid ... 31 6.6
AL096855-1|CAI19208.1| 1566|Homo sapiens arginine-glutamic acid ... 31 6.6
AF118275-1|AAD27584.1| 995|Homo sapiens atrophin-related protei... 31 6.6
AF041104-1|AAC28264.1| 1012|Homo sapiens atrophin-1 like protein... 31 6.6
AF016005-1|AAC31120.1| 1012|Homo sapiens atrophin-1 related prot... 31 6.6
AB036737-1|BAA95898.1| 1566|Homo sapiens RERE protein. 31 6.6
AB007927-1|BAA32303.3| 1552|Homo sapiens KIAA0458 protein protein. 31 6.6
>AL357713-1|CAH73433.1| 1566|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1566
Score = 31.5 bits (68), Expect = 6.6
Identities = 22/84 (26%), Positives = 23/84 (27%)
Frame = +1
Query: 442 PXTXXLXXPXPXXXAXXXXPVGLPGXXXPPXXRXVPTPXXXKXSXHXSPXEXRXXSPXXH 621
P T L P P A P G P P PT +P P H
Sbjct: 756 PGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPH 815
Query: 622 NPMXPLRXXSSXPXXXSXGQAXXP 693
P P P S GQ P
Sbjct: 816 PPPHPSPHPPLQPLTGSAGQPSAP 839
>AL356072-3|CAH70517.1| 1298|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1298
Score = 31.5 bits (68), Expect = 6.6
Identities = 22/84 (26%), Positives = 23/84 (27%)
Frame = +1
Query: 442 PXTXXLXXPXPXXXAXXXXPVGLPGXXXPPXXRXVPTPXXXKXSXHXSPXEXRXXSPXXH 621
P T L P P A P G P P PT +P P H
Sbjct: 488 PGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPH 547
Query: 622 NPMXPLRXXSSXPXXXSXGQAXXP 693
P P P S GQ P
Sbjct: 548 PPPHPSPHPPLQPLTGSAGQPSAP 571
>AL356072-2|CAH70516.1| 1566|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1566
Score = 31.5 bits (68), Expect = 6.6
Identities = 22/84 (26%), Positives = 23/84 (27%)
Frame = +1
Query: 442 PXTXXLXXPXPXXXAXXXXPVGLPGXXXPPXXRXVPTPXXXKXSXHXSPXEXRXXSPXXH 621
P T L P P A P G P P PT +P P H
Sbjct: 756 PGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPH 815
Query: 622 NPMXPLRXXSSXPXXXSXGQAXXP 693
P P P S GQ P
Sbjct: 816 PPPHPSPHPPLQPLTGSAGQPSAP 839
>AL096855-2|CAI19209.1| 1298|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1298
Score = 31.5 bits (68), Expect = 6.6
Identities = 22/84 (26%), Positives = 23/84 (27%)
Frame = +1
Query: 442 PXTXXLXXPXPXXXAXXXXPVGLPGXXXPPXXRXVPTPXXXKXSXHXSPXEXRXXSPXXH 621
P T L P P A P G P P PT +P P H
Sbjct: 488 PGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPH 547
Query: 622 NPMXPLRXXSSXPXXXSXGQAXXP 693
P P P S GQ P
Sbjct: 548 PPPHPSPHPPLQPLTGSAGQPSAP 571
>AL096855-1|CAI19208.1| 1566|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1566
Score = 31.5 bits (68), Expect = 6.6
Identities = 22/84 (26%), Positives = 23/84 (27%)
Frame = +1
Query: 442 PXTXXLXXPXPXXXAXXXXPVGLPGXXXPPXXRXVPTPXXXKXSXHXSPXEXRXXSPXXH 621
P T L P P A P G P P PT +P P H
Sbjct: 756 PGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPH 815
Query: 622 NPMXPLRXXSSXPXXXSXGQAXXP 693
P P P S GQ P
Sbjct: 816 PPPHPSPHPPLQPLTGSAGQPSAP 839
>AF118275-1|AAD27584.1| 995|Homo sapiens atrophin-related protein
ARP protein.
Length = 995
Score = 31.5 bits (68), Expect = 6.6
Identities = 22/84 (26%), Positives = 23/84 (27%)
Frame = +1
Query: 442 PXTXXLXXPXPXXXAXXXXPVGLPGXXXPPXXRXVPTPXXXKXSXHXSPXEXRXXSPXXH 621
P T L P P A P G P P PT +P P H
Sbjct: 185 PGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPH 244
Query: 622 NPMXPLRXXSSXPXXXSXGQAXXP 693
P P P S GQ P
Sbjct: 245 PPPHPSPHPPLQPLTGSAGQPSAP 268
>AF041104-1|AAC28264.1| 1012|Homo sapiens atrophin-1 like protein
protein.
Length = 1012
Score = 31.5 bits (68), Expect = 6.6
Identities = 22/84 (26%), Positives = 23/84 (27%)
Frame = +1
Query: 442 PXTXXLXXPXPXXXAXXXXPVGLPGXXXPPXXRXVPTPXXXKXSXHXSPXEXRXXSPXXH 621
P T L P P A P G P P PT +P P H
Sbjct: 202 PGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPH 261
Query: 622 NPMXPLRXXSSXPXXXSXGQAXXP 693
P P P S GQ P
Sbjct: 262 PPPHPSPHPPLQPLTGSAGQPSAP 285
>AF016005-1|AAC31120.1| 1012|Homo sapiens atrophin-1 related protein
protein.
Length = 1012
Score = 31.5 bits (68), Expect = 6.6
Identities = 22/84 (26%), Positives = 23/84 (27%)
Frame = +1
Query: 442 PXTXXLXXPXPXXXAXXXXPVGLPGXXXPPXXRXVPTPXXXKXSXHXSPXEXRXXSPXXH 621
P T L P P A P G P P PT +P P H
Sbjct: 202 PGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPH 261
Query: 622 NPMXPLRXXSSXPXXXSXGQAXXP 693
P P P S GQ P
Sbjct: 262 PPPHPSPHPPLQPLTGSAGQPSAP 285
>AB036737-1|BAA95898.1| 1566|Homo sapiens RERE protein.
Length = 1566
Score = 31.5 bits (68), Expect = 6.6
Identities = 22/84 (26%), Positives = 23/84 (27%)
Frame = +1
Query: 442 PXTXXLXXPXPXXXAXXXXPVGLPGXXXPPXXRXVPTPXXXKXSXHXSPXEXRXXSPXXH 621
P T L P P A P G P P PT +P P H
Sbjct: 756 PGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPH 815
Query: 622 NPMXPLRXXSSXPXXXSXGQAXXP 693
P P P S GQ P
Sbjct: 816 PPPHPSPHPPLQPLTGSAGQPSAP 839
>AB007927-1|BAA32303.3| 1552|Homo sapiens KIAA0458 protein protein.
Length = 1552
Score = 31.5 bits (68), Expect = 6.6
Identities = 22/84 (26%), Positives = 23/84 (27%)
Frame = +1
Query: 442 PXTXXLXXPXPXXXAXXXXPVGLPGXXXPPXXRXVPTPXXXKXSXHXSPXEXRXXSPXXH 621
P T L P P A P G P P PT +P P H
Sbjct: 742 PGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPH 801
Query: 622 NPMXPLRXXSSXPXXXSXGQAXXP 693
P P P S GQ P
Sbjct: 802 PPPHPSPHPPLQPLTGSAGQPSAP 825
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,338,587
Number of Sequences: 237096
Number of extensions: 643745
Number of successful extensions: 896
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 896
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 17890024750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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