Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_K22
(888 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0843 + 25315089-25315417,25317274-25317310,25317439-253176... 108 5e-24
08_01_0404 - 3590296-3590409,3590529-3590819,3592414-3592461,359... 107 1e-23
12_01_1059 - 10934937-10935446,10938224-10938271,10938383-109386... 103 1e-22
02_05_1073 - 33895608-33895880,33896133-33896180,33896273-338965... 102 4e-22
01_06_0322 + 28472680-28473053,28474434-28474470,28474578-284748... 100 3e-21
02_01_0677 - 5039344-5039793,5040415-5040462,5040540-5040776,504... 93 4e-19
08_02_1073 - 24117834-24118037,24118122-24118211,24118299-241184... 46 4e-05
08_02_0090 - 12249919-12250158,12250826-12250927,12251046-122511... 29 3.7
03_02_0895 + 12230683-12230844,12230937-12230991,12231106-122311... 29 3.7
07_03_1218 + 24955627-24955631,24955883-24955937,24956015-249561... 29 6.5
02_02_0675 + 12845980-12846111,12846211-12846363,12846954-128471... 29 6.5
01_05_0104 + 18148396-18148642,18148797-18148886,18148972-181490... 29 6.5
>06_03_0843 +
25315089-25315417,25317274-25317310,25317439-25317675,
25317745-25317792,25318144-25318577,25318675-25318759
Length = 389
Score = 108 bits (260), Expect = 5e-24
Identities = 57/153 (37%), Positives = 83/153 (54%), Gaps = 1/153 (0%)
Frame = +1
Query: 238 IAAKLAFLPPEP-TYAFTPDETGSKFSLTLTERAEWQYSEREKENIEGFYSRTTRGNKIA 414
+AA+ AF PP P +Y P + S + + +E T RG ++
Sbjct: 8 VAARFAFFPPAPPSYGVEPPPSPSPAAAAEDGAVVELSGVPRRAGVEARRLPTGRGTEVV 67
Query: 415 CLFVRCSPNARFTILFSHGNAVDLGQMSSFYLGLGTRINCNIFXXXXXXXXXXXXKPSEK 594
++VR P AR T+L+SHGNA DLGQM ++ L + +N N+ KPSE+
Sbjct: 68 AMYVR-QPGARLTLLYSHGNAADLGQMYELFVELSSHLNVNLMGYDYSGYGQSSGKPSEQ 126
Query: 595 NLYADIDAAWQALRTRYGISPENIILYGQSIGT 693
N Y+DI+AA++ L YG + ENIILYGQS+G+
Sbjct: 127 NTYSDIEAAYRCLVETYGATEENIILYGQSVGS 159
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 699 TVDLAVRY-EVGAVVLILPLMSGMRVAXPTPRELGFSMHXPVXK 827
T+DLA R + AVVL P++SG+RV P F ++ + K
Sbjct: 162 TLDLASRLPHLRAVVLHSPILSGLRVMYPVKHTYWFDIYKNIDK 205
>08_01_0404 -
3590296-3590409,3590529-3590819,3592414-3592461,
3592559-3592795,3593668-3593704,3594311-3594627
Length = 347
Score = 107 bits (257), Expect = 1e-23
Identities = 58/153 (37%), Positives = 84/153 (54%), Gaps = 1/153 (0%)
Frame = +1
Query: 238 IAAKLAFLPPEP-TYAFTPDETGSKFSLTLTERAEWQYSEREKENIEGFYSRTTRGNKIA 414
+AA+ AF PPEP TYA DE + + ++ T +G+K+
Sbjct: 10 LAARFAFFPPEPATYAVRKDEACGGGGRLVASGVPRDAA------VDVLLVDTRKGSKVV 63
Query: 415 CLFVRCSPNARFTILFSHGNAVDLGQMSSFYLGLGTRINCNIFXXXXXXXXXXXXKPSEK 594
++R +P AR T+L+SHGNA DLGQ+ ++ L + N+ KPSE+
Sbjct: 64 AFYLR-NPAARLTVLYSHGNAADLGQLYDLFVQLKVNLKVNLMGYDYSGYGASTGKPSEE 122
Query: 595 NLYADIDAAWQALRTRYGISPENIILYGQSIGT 693
N YADI+A +Q L T YGIS E++ILYGQS+G+
Sbjct: 123 NTYADIEAVYQCLETEYGISQEDLILYGQSVGS 155
>12_01_1059 -
10934937-10935446,10938224-10938271,10938383-10938619,
10938711-10938747,10941018-10941286
Length = 366
Score = 103 bits (248), Expect = 1e-22
Identities = 57/149 (38%), Positives = 80/149 (53%), Gaps = 1/149 (0%)
Frame = +1
Query: 250 LAFLPPEP-TYAFTPDETGSKFSLTLTERAEWQYSEREKENIEGFYSRTTRGNKIACLFV 426
+AF PP P +YA D ++T + +EN+E RT RGN +A ++V
Sbjct: 1 MAFFPPTPPSYALVDDPAAGVTTMT---------GQPHRENVEVLRLRTRRGNTVAAVYV 51
Query: 427 RCSPNARFTILFSHGNAVDLGQMSSFYLGLGTRINCNIFXXXXXXXXXXXXKPSEKNLYA 606
R P+A T+L+SHGNA DLG + +L L + N+ KPSE N YA
Sbjct: 52 R-HPDAATTLLYSHGNAADLGHLYQLFLHLSFNLRVNVLGYDYSGYGQSSGKPSEHNTYA 110
Query: 607 DIDAAWQALRTRYGISPENIILYGQSIGT 693
DI+AA++ L +G E IILYGQS+G+
Sbjct: 111 DIEAAYKCLIENFGAKEEEIILYGQSVGS 139
Score = 35.1 bits (77), Expect = 0.075
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +3
Query: 699 TVDLAVR-YEVGAVVLILPLMSGMRVAXPTPRELGFSMHXPVXK 827
TVDLA R + + AVVL P++SG+RV P R F ++ + K
Sbjct: 142 TVDLASRLHRLRAVVLHSPILSGLRVMYPVKRTYWFDIYKNIDK 185
>02_05_1073 -
33895608-33895880,33896133-33896180,33896273-33896509,
33897233-33897269,33898603-33898913
Length = 301
Score = 102 bits (244), Expect = 4e-22
Identities = 59/153 (38%), Positives = 77/153 (50%), Gaps = 1/153 (0%)
Frame = +1
Query: 238 IAAKLAFLPPEP-TYAFTPDETGSKFSLTLTERAEWQYSEREKENIEGFYSRTTRGNKIA 414
+AA+LAF PPEP TY +E G + +E T G ++
Sbjct: 8 VAARLAFFPPEPPTYELVAEEGGGGGGVVRMTGVS------ADAGVEVHALPTKGGTRVV 61
Query: 415 CLFVRCSPNARFTILFSHGNAVDLGQMSSFYLGLGTRINCNIFXXXXXXXXXXXXKPSEK 594
F R P+AR T+L+SHGNA DLGQM +L L + NI KPSE
Sbjct: 62 AAFWR-HPSARLTLLYSHGNAADLGQMLGLFLELRAHLRVNIMSYDYSGYGASTGKPSEY 120
Query: 595 NLYADIDAAWQALRTRYGISPENIILYGQSIGT 693
N Y DI+A + L YGI PE++ILYGQS+G+
Sbjct: 121 NTYCDIEAVYDCLTKVYGIEPEDLILYGQSVGS 153
>01_06_0322 +
28472680-28473053,28474434-28474470,28474578-28474814,
28474891-28474938,28475263-28475661
Length = 364
Score = 99.5 bits (237), Expect = 3e-21
Identities = 60/168 (35%), Positives = 87/168 (51%), Gaps = 16/168 (9%)
Frame = +1
Query: 238 IAAKLAFLPPEP-TYAFTPDETGSKFSLTLTERAEWQYSERE---------------KEN 369
IAA+ AF PP P +Y D + ++ R + R+ ++
Sbjct: 8 IAARFAFFPPTPPSYTVVADAATGRLAIPEISRPPARRRRRDGGGDASASGAAPAEDEDG 67
Query: 370 IEGFYSRTTRGNKIACLFVRCSPNARFTILFSHGNAVDLGQMSSFYLGLGTRINCNIFXX 549
E RT RGN+I + VR A T+L+SHGNA DLGQM ++ L R+ N+F
Sbjct: 68 TEVVRLRTRRGNEIVGVHVR-HERASATLLYSHGNAADLGQMYGLFVELSRRLRINLFGY 126
Query: 550 XXXXXXXXXXKPSEKNLYADIDAAWQALRTRYGISPENIILYGQSIGT 693
KP+E N YADI+AA+ L+ +YG++ E+IILYGQS+G+
Sbjct: 127 DYSGYGRSTGKPTECNTYADIEAAYNCLKEKYGVADEDIILYGQSVGS 174
Score = 31.9 bits (69), Expect = 0.70
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 699 TVDLAVRY-EVGAVVLILPLMSGMRVAXPTPRELGFSMHXPVXK 827
T+DLA R + VVL P++SG+RV P R F ++ + K
Sbjct: 177 TIDLASRLPNLRGVVLHSPILSGLRVLYPVKRTYWFDIYKNIDK 220
>02_01_0677 -
5039344-5039793,5040415-5040462,5040540-5040776,
5040862-5040898,5042474-5042491,5042801-5043153
Length = 380
Score = 92.7 bits (220), Expect = 4e-19
Identities = 49/115 (42%), Positives = 65/115 (56%), Gaps = 6/115 (5%)
Frame = +1
Query: 367 NIEGFYSRTTRGNKIACLFVRCSPNARFTILFSHGNAVDLGQMSSFYLGLGTRINCNIFX 546
N+E RT RG ++ ++VR AR T+L+SHGNA DLGQM ++ L +N N+
Sbjct: 60 NVEARRLRTKRGTEVVAMYVR-QAGARLTLLYSHGNAADLGQMFELFVELSAHLNVNLMG 118
Query: 547 XXXXXXXXXXX------KPSEKNLYADIDAAWQALRTRYGISPENIILYGQSIGT 693
KPSE N YADI+A ++ L YG S ENIILYGQS+G+
Sbjct: 119 IRIRRLYDYSGYGQSSGKPSEHNTYADIEAVYRCLVETYGASEENIILYGQSVGS 173
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 699 TVDLAVRY-EVGAVVLILPLMSGMRVAXPTPRELGFSMHXPVXK 827
T+DLA R + AVVL P++SG+RV P F ++ + K
Sbjct: 176 TLDLASRLPHLRAVVLHSPILSGLRVMYPVKHTYWFDIYKNIDK 219
>08_02_1073 -
24117834-24118037,24118122-24118211,24118299-24118404,
24118477-24118648,24118737-24118839,24118927-24119181,
24119259-24119336,24119449-24119541,24119660-24119800,
24119882-24119986,24120135-24120212,24120297-24120341,
24120463-24120579,24120685-24120828,24120934-24121017,
24121139-24121232,24121322-24121447,24121585-24121658,
24121870-24122098,24123124-24123611,24123702-24123749,
24123841-24124077,24124368-24124404,24125011-24125018
Length = 1051
Score = 46.0 bits (104), Expect = 4e-05
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = +1
Query: 580 KPSEKNLYADIDAAWQALRTRYGISPENIILYGQSIGT 693
K SE N +ADI+AA++ L YG E+IILYGQS+G+
Sbjct: 15 KASEANTFADIEAAYKCLVEVYGTREEDIILYGQSVGS 52
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +3
Query: 699 TVDLAVR-YEVGAVVLILPLMSGMRVAXPTPRELGFSMHXPVXK 827
TVDLA + + + AVVL P++SG+RV + F ++ + K
Sbjct: 55 TVDLAAQLHRIRAVVLHSPILSGLRVMYSVKKTYWFDIYKNIEK 98
>08_02_0090 -
12249919-12250158,12250826-12250927,12251046-12251135,
12251227-12251421
Length = 208
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/58 (25%), Positives = 24/58 (41%)
Frame = -2
Query: 368 FSFSRSEYCHSARSVSVKENFDPVSSGVNAYVGSGGRNANLAAIFPGHGGQQNRQQSS 195
F R E C S ++ + N +N + NLAA+FP H +Q ++
Sbjct: 41 FKHQRQEDCQSIQNALSEFNNQTKEYMINGSASTPPPQINLAALFPSHSSPTTQQNTT 98
>03_02_0895 +
12230683-12230844,12230937-12230991,12231106-12231169,
12231292-12231334,12231509-12231607,12231710-12231778,
12231912-12232245,12232317-12232471,12232592-12233287
Length = 558
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/77 (24%), Positives = 33/77 (42%)
Frame = -2
Query: 407 LLPLVVLE*KPSMFSFSRSEYCHSARSVSVKENFDPVSSGVNAYVGSGGRNANLAAIFPG 228
+L L+VL +P+ +R H + S K+ D + A GG A + A PG
Sbjct: 439 VLKLLVLIGRPAFMERARRVLGHERQESSSKQGHDQKPAVTRAGDDDGGAKAGVTAAKPG 498
Query: 227 HGGQQNRQQSSLKLNPF 177
+ ++++ PF
Sbjct: 499 KKKGSASKPAAVEFGPF 515
>07_03_1218 +
24955627-24955631,24955883-24955937,24956015-24956131,
24957142-24957306,24957703-24957958,24957987-24958051
Length = 220
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 583 PSEKNLYADIDAAWQALRTRYGISPENIILYGQSIG 690
PS+K + D AA L R I I+++G+S+G
Sbjct: 10 PSQKGIINDAQAALDHLVQRKDIDTSRIVVFGRSLG 45
>02_02_0675 +
12845980-12846111,12846211-12846363,12846954-12847100,
12847372-12847656
Length = 238
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 292 DETGSKFSLTLTERAEWQYSEREKENIEGFY 384
DET SK + + R ++Q SE +E+++G Y
Sbjct: 85 DETVSKLTKAIKWRQDFQVSELSEESVKGLY 115
>01_05_0104 +
18148396-18148642,18148797-18148886,18148972-18149072,
18149174-18149287,18149381-18149462,18149592-18149659,
18149747-18149806,18149885-18150009,18150663-18150861,
18150942-18151073,18151152-18151244,18151360-18152244,
18152339-18152664,18153003-18153341,18153911-18153996,
18154054-18154139
Length = 1010
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 150 CSQTIPKQNERIKFQRTLLPVLLSAMPRKN 239
C++T PK N K +R LLP+ +S + R N
Sbjct: 596 CNETTPKSNRAKKKKRMLLPLGVSNINRPN 625
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,081,531
Number of Sequences: 37544
Number of extensions: 390874
Number of successful extensions: 956
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 951
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -