Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_K21
(915 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 40 0.002
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 40 0.002
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 39 0.006
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 39 0.006
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 39 0.006
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 37 0.023
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.040
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.040
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.040
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 34 0.16
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 32 0.66
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 31 1.5
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 31 1.5
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 1.5
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 29 3.5
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 29 3.5
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 29 3.5
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 29 3.5
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 29 4.6
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 29 4.6
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 29 6.1
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 29 6.1
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 6.1
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 29 6.1
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 29 6.1
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 28 8.1
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 28 8.1
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 28 8.1
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 28 8.1
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 40.3 bits (90), Expect = 0.002
Identities = 26/92 (28%), Positives = 30/92 (32%), Gaps = 1/92 (1%)
Frame = +2
Query: 641 PXPPRGXXXIXPPKRGXPGXXXXSXXPPXKKFFPQXAXGGPPXXKGPXRGGXQKXPPPPX 820
P PP + PP PG PP +P PP + P G PPPP
Sbjct: 264 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPP--PPPGRTPGPPGMPGMPPPPP 321
Query: 821 XXR-GKXPXXXXGPNPXHKKKXPXXXPXXKPP 913
R G P P + P P PP
Sbjct: 322 PSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 353
Score = 37.1 bits (82), Expect = 0.017
Identities = 24/82 (29%), Positives = 25/82 (30%), Gaps = 2/82 (2%)
Frame = +2
Query: 674 PPKR--GXPGXXXXSXXPPXKKFFPQXAXGGPPXXKGPXRGGXQKXPPPPXXXRGKXPXX 847
PP R G PG PP +F P G PP R PPPP P
Sbjct: 303 PPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGM 362
Query: 848 XXGPNPXHKKKXPXXXPXXKPP 913
P P P PP
Sbjct: 363 YPPPPPSRPPAPPSGHGMIPPP 384
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 40.3 bits (90), Expect = 0.002
Identities = 26/92 (28%), Positives = 30/92 (32%), Gaps = 1/92 (1%)
Frame = +2
Query: 641 PXPPRGXXXIXPPKRGXPGXXXXSXXPPXKKFFPQXAXGGPPXXKGPXRGGXQKXPPPPX 820
P PP + PP PG PP +P PP + P G PPPP
Sbjct: 274 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPP--PPPGRTPGPPGMPGMPPPPP 331
Query: 821 XXR-GKXPXXXXGPNPXHKKKXPXXXPXXKPP 913
R G P P + P P PP
Sbjct: 332 PSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 363
Score = 37.1 bits (82), Expect = 0.017
Identities = 24/82 (29%), Positives = 25/82 (30%), Gaps = 2/82 (2%)
Frame = +2
Query: 674 PPKR--GXPGXXXXSXXPPXKKFFPQXAXGGPPXXKGPXRGGXQKXPPPPXXXRGKXPXX 847
PP R G PG PP +F P G PP R PPPP P
Sbjct: 313 PPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGM 372
Query: 848 XXGPNPXHKKKXPXXXPXXKPP 913
P P P PP
Sbjct: 373 YPPPPPSRPPAPPSGHGMIPPP 394
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 38.7 bits (86), Expect = 0.006
Identities = 27/95 (28%), Positives = 30/95 (31%), Gaps = 4/95 (4%)
Frame = +2
Query: 641 PXPPRGXXXIXPPKRGXPGXXXX-SXXPPXKKFFPQXAXGGPPXXKGPXRGGXQKXPPPP 817
P PP PP+ G P S PP P G P P RG PP
Sbjct: 255 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 314
Query: 818 XXXRGKXPXXXXG---PNPXHKKKXPXXXPXXKPP 913
G P G P P K++ P P P
Sbjct: 315 PQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSP 349
Score = 36.7 bits (81), Expect = 0.023
Identities = 29/89 (32%), Positives = 30/89 (33%)
Frame = +2
Query: 647 PPRGXXXIXPPKRGXPGXXXXSXXPPXKKFFPQXAXGGPPXXKGPXRGGXQKXPPPPXXX 826
PP G PP +G P S PP P A G PP P R G PPPP
Sbjct: 232 PPAGSPPPPPPPKGSP-PLAGSGSPP-----PPPAAGSPP----PPRTG--SPPPPPTGS 279
Query: 827 RGKXPXXXXGPNPXHKKKXPXXXPXXKPP 913
P P P P P PP
Sbjct: 280 PPPPPAGGSPPPPRAGSPPPPPPPRGSPP 308
Score = 33.9 bits (74), Expect = 0.16
Identities = 17/58 (29%), Positives = 20/58 (34%)
Frame = +1
Query: 739 PPXGXGGXXXPKRXPPXGXTKXXPPPXXXXGKXPXXXXGAXPXPQKKXPPGXXXGKTP 912
PP G P + P PPP G P G+ P P PP G +P
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP 289
Score = 33.1 bits (72), Expect = 0.28
Identities = 26/96 (27%), Positives = 28/96 (29%), Gaps = 5/96 (5%)
Frame = +2
Query: 641 PXPPRGXXXIXPPKRGXPGXXXXSXXPPXKKFFPQXAXGGPPXXKG-----PXRGGXQKX 805
P PP+G + P S PP P G PP P R G
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG---S 296
Query: 806 PPPPXXXRGKXPXXXXGPNPXHKKKXPXXXPXXKPP 913
PPPP RG P P P PP
Sbjct: 297 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 332
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 38.7 bits (86), Expect = 0.006
Identities = 27/95 (28%), Positives = 30/95 (31%), Gaps = 4/95 (4%)
Frame = +2
Query: 641 PXPPRGXXXIXPPKRGXPGXXXX-SXXPPXKKFFPQXAXGGPPXXKGPXRGGXQKXPPPP 817
P PP PP+ G P S PP P G P P RG PP
Sbjct: 276 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 335
Query: 818 XXXRGKXPXXXXG---PNPXHKKKXPXXXPXXKPP 913
G P G P P K++ P P P
Sbjct: 336 PQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSP 370
Score = 36.7 bits (81), Expect = 0.023
Identities = 29/89 (32%), Positives = 30/89 (33%)
Frame = +2
Query: 647 PPRGXXXIXPPKRGXPGXXXXSXXPPXKKFFPQXAXGGPPXXKGPXRGGXQKXPPPPXXX 826
PP G PP +G P S PP P A G PP P R G PPPP
Sbjct: 253 PPAGSPPPPPPPKGSP-PLAGSGSPP-----PPPAAGSPP----PPRTG--SPPPPPTGS 300
Query: 827 RGKXPXXXXGPNPXHKKKXPXXXPXXKPP 913
P P P P P PP
Sbjct: 301 PPPPPAGGSPPPPRAGSPPPPPPPRGSPP 329
Score = 33.9 bits (74), Expect = 0.16
Identities = 17/58 (29%), Positives = 20/58 (34%)
Frame = +1
Query: 739 PPXGXGGXXXPKRXPPXGXTKXXPPPXXXXGKXPXXXXGAXPXPQKKXPPGXXXGKTP 912
PP G P + P PPP G P G+ P P PP G +P
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP 310
Score = 33.1 bits (72), Expect = 0.28
Identities = 26/96 (27%), Positives = 28/96 (29%), Gaps = 5/96 (5%)
Frame = +2
Query: 641 PXPPRGXXXIXPPKRGXPGXXXXSXXPPXKKFFPQXAXGGPPXXKG-----PXRGGXQKX 805
P PP+G + P S PP P G PP P R G
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG---S 317
Query: 806 PPPPXXXRGKXPXXXXGPNPXHKKKXPXXXPXXKPP 913
PPPP RG P P P PP
Sbjct: 318 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 353
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 38.7 bits (86), Expect = 0.006
Identities = 27/95 (28%), Positives = 30/95 (31%), Gaps = 4/95 (4%)
Frame = +2
Query: 641 PXPPRGXXXIXPPKRGXPGXXXX-SXXPPXKKFFPQXAXGGPPXXKGPXRGGXQKXPPPP 817
P PP PP+ G P S PP P G P P RG PP
Sbjct: 261 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 320
Query: 818 XXXRGKXPXXXXG---PNPXHKKKXPXXXPXXKPP 913
G P G P P K++ P P P
Sbjct: 321 PQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSP 355
Score = 36.7 bits (81), Expect = 0.023
Identities = 29/89 (32%), Positives = 30/89 (33%)
Frame = +2
Query: 647 PPRGXXXIXPPKRGXPGXXXXSXXPPXKKFFPQXAXGGPPXXKGPXRGGXQKXPPPPXXX 826
PP G PP +G P S PP P A G PP P R G PPPP
Sbjct: 238 PPAGSPPPPPPPKGSP-PLAGSGSPP-----PPPAAGSPP----PPRTG--SPPPPPTGS 285
Query: 827 RGKXPXXXXGPNPXHKKKXPXXXPXXKPP 913
P P P P P PP
Sbjct: 286 PPPPPAGGSPPPPRAGSPPPPPPPRGSPP 314
Score = 33.9 bits (74), Expect = 0.16
Identities = 17/58 (29%), Positives = 20/58 (34%)
Frame = +1
Query: 739 PPXGXGGXXXPKRXPPXGXTKXXPPPXXXXGKXPXXXXGAXPXPQKKXPPGXXXGKTP 912
PP G P + P PPP G P G+ P P PP G +P
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP 295
Score = 33.1 bits (72), Expect = 0.28
Identities = 26/96 (27%), Positives = 28/96 (29%), Gaps = 5/96 (5%)
Frame = +2
Query: 641 PXPPRGXXXIXPPKRGXPGXXXXSXXPPXKKFFPQXAXGGPPXXKG-----PXRGGXQKX 805
P PP+G + P S PP P G PP P R G
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG---S 302
Query: 806 PPPPXXXRGKXPXXXXGPNPXHKKKXPXXXPXXKPP 913
PPPP RG P P P PP
Sbjct: 303 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 338
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 36.7 bits (81), Expect = 0.023
Identities = 29/99 (29%), Positives = 33/99 (33%), Gaps = 11/99 (11%)
Frame = +2
Query: 647 PPRGXXXIXPPKRGXPGXXXXSXXPPXKKFFPQXAXGGPPXXKG-----------PXRGG 793
PP G PP +G P PP F G PP G P RGG
Sbjct: 720 PPPGVGP--PPPQGIPPMGFDPNKPPPPMFQQGFNAGAPPPPFGRGAGPMSSFPPPPRGG 777
Query: 794 XQKXPPPPXXXRGKXPXXXXGPNPXHKKKXPXXXPXXKP 910
PPPP G+ GP P H + P +P
Sbjct: 778 MHHMPPPPSFRGGR--GGHGGPPPPHFDRRGGGGPPFRP 814
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = +2
Query: 641 PXPPRGXXXIXPPKRGXPGXXXXSXXPPXKKFFPQXAXGGPPXXKGPXRG 790
P PPRG PP G PP F + GGPP RG
Sbjct: 771 PPPPRGGMHHMPPPPSFRGGRGGHGGPP-PPHFDRRGGGGPPFRPENGRG 819
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.9 bits (79), Expect = 0.040
Identities = 23/66 (34%), Positives = 23/66 (34%), Gaps = 3/66 (4%)
Frame = +3
Query: 642 PXPPGGXKX*XPQKGGNPGPXXXPXXPPXKNFSPXXPX---GXXPXXKXPXXGXXKKXPP 812
P PPGG P GG P P PP P P G P P G K PP
Sbjct: 729 PPPPGGLP---PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Query: 813 PXXXXG 830
P G
Sbjct: 786 PPPPPG 791
Score = 33.9 bits (74), Expect = 0.16
Identities = 22/73 (30%), Positives = 24/73 (32%), Gaps = 6/73 (8%)
Frame = +2
Query: 641 PXPPRGXXXIX------PPKRGXPGXXXXSXXPPXKKFFPQXAXGGPPXXKGPXRGGXQK 802
P PP G I PP G P PP P + G PP P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 803 XPPPPXXXRGKXP 841
PPPP +G P
Sbjct: 773 PPPPPGGFKGGPP 785
Score = 32.7 bits (71), Expect = 0.38
Identities = 21/75 (28%), Positives = 21/75 (28%)
Frame = +2
Query: 674 PPKRGXPGXXXXSXXPPXKKFFPQXAXGGPPXXKGPXRGGXQKXPPPPXXXRGKXPXXXX 853
PP G P PP P G PP PPPP G P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Query: 854 GPNPXHKKKXPXXXP 898
P P K P P
Sbjct: 774 PPPPGGFKGGPPPPP 788
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Frame = +1
Query: 739 PPXGXGGXXXPKRXPPXGXTKXXPPPXXXXGK-XPXXXXGAXPXPQKKXP 885
PP GG P PP G K PPP G P P KK P
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVP 810
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/58 (29%), Positives = 17/58 (29%)
Frame = +1
Query: 739 PPXGXGGXXXPKRXPPXGXTKXXPPPXXXXGKXPXXXXGAXPXPQKKXPPGXXXGKTP 912
PP GG PP PP P G P P PPG G P
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.9 bits (79), Expect = 0.040
Identities = 23/66 (34%), Positives = 23/66 (34%), Gaps = 3/66 (4%)
Frame = +3
Query: 642 PXPPGGXKX*XPQKGGNPGPXXXPXXPPXKNFSPXXPX---GXXPXXKXPXXGXXKKXPP 812
P PPGG P GG P P PP P P G P P G K PP
Sbjct: 729 PPPPGGLP---PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Query: 813 PXXXXG 830
P G
Sbjct: 786 PPPPPG 791
Score = 33.9 bits (74), Expect = 0.16
Identities = 22/73 (30%), Positives = 24/73 (32%), Gaps = 6/73 (8%)
Frame = +2
Query: 641 PXPPRGXXXIX------PPKRGXPGXXXXSXXPPXKKFFPQXAXGGPPXXKGPXRGGXQK 802
P PP G I PP G P PP P + G PP P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 803 XPPPPXXXRGKXP 841
PPPP +G P
Sbjct: 773 PPPPPGGFKGGPP 785
Score = 32.7 bits (71), Expect = 0.38
Identities = 21/75 (28%), Positives = 21/75 (28%)
Frame = +2
Query: 674 PPKRGXPGXXXXSXXPPXKKFFPQXAXGGPPXXKGPXRGGXQKXPPPPXXXRGKXPXXXX 853
PP G P PP P G PP PPPP G P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Query: 854 GPNPXHKKKXPXXXP 898
P P K P P
Sbjct: 774 PPPPGGFKGGPPPPP 788
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Frame = +1
Query: 739 PPXGXGGXXXPKRXPPXGXTKXXPPPXXXXGK-XPXXXXGAXPXPQKKXP 885
PP GG P PP G K PPP G P P KK P
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVP 810
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/58 (29%), Positives = 17/58 (29%)
Frame = +1
Query: 739 PPXGXGGXXXPKRXPPXGXTKXXPPPXXXXGKXPXXXXGAXPXPQKKXPPGXXXGKTP 912
PP GG PP PP P G P P PPG G P
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.9 bits (79), Expect = 0.040
Identities = 23/66 (34%), Positives = 23/66 (34%), Gaps = 3/66 (4%)
Frame = +3
Query: 642 PXPPGGXKX*XPQKGGNPGPXXXPXXPPXKNFSPXXPX---GXXPXXKXPXXGXXKKXPP 812
P PPGG P GG P P PP P P G P P G K PP
Sbjct: 312 PPPPGGLP---PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 368
Query: 813 PXXXXG 830
P G
Sbjct: 369 PPPPPG 374
Score = 33.9 bits (74), Expect = 0.16
Identities = 22/73 (30%), Positives = 24/73 (32%), Gaps = 6/73 (8%)
Frame = +2
Query: 641 PXPPRGXXXIX------PPKRGXPGXXXXSXXPPXKKFFPQXAXGGPPXXKGPXRGGXQK 802
P PP G I PP G P PP P + G PP P
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Query: 803 XPPPPXXXRGKXP 841
PPPP +G P
Sbjct: 356 PPPPPGGFKGGPP 368
Score = 32.7 bits (71), Expect = 0.38
Identities = 21/75 (28%), Positives = 21/75 (28%)
Frame = +2
Query: 674 PPKRGXPGXXXXSXXPPXKKFFPQXAXGGPPXXKGPXRGGXQKXPPPPXXXRGKXPXXXX 853
PP G P PP P G PP PPPP G P
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 356
Query: 854 GPNPXHKKKXPXXXP 898
P P K P P
Sbjct: 357 PPPPGGFKGGPPPPP 371
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Frame = +1
Query: 739 PPXGXGGXXXPKRXPPXGXTKXXPPPXXXXGK-XPXXXXGAXPXPQKKXP 885
PP GG P PP G K PPP G P P KK P
Sbjct: 344 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVP 393
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/58 (29%), Positives = 17/58 (29%)
Frame = +1
Query: 739 PPXGXGGXXXPKRXPPXGXTKXXPPPXXXXGKXPXXXXGAXPXPQKKXPPGXXXGKTP 912
PP GG PP PP P G P P PPG G P
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 368
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 33.9 bits (74), Expect = 0.16
Identities = 23/79 (29%), Positives = 25/79 (31%), Gaps = 7/79 (8%)
Frame = +2
Query: 641 PXPPRGXXXIXPPKRGXP------GXXXXSXXPPXKKF-FPQXAXGGPPXXKGPXRGGXQ 799
P PP+G PP G P G PP K P G P G
Sbjct: 34 PPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPPPTGEPQDLSAEEGNAS 93
Query: 800 KXPPPPXXXRGKXPXXXXG 856
+ PPPP G P G
Sbjct: 94 RRPPPPPKGTGTPPPPPTG 112
Score = 33.9 bits (74), Expect = 0.16
Identities = 24/81 (29%), Positives = 28/81 (34%), Gaps = 9/81 (11%)
Frame = +2
Query: 641 PXPPRGXXXIXPPKRGXP----GXXXXSXXPPXKKFFPQXAXGGPPXXKGPXR-----GG 793
P PP+G PP G P G S PP P+ PP G + G
Sbjct: 97 PPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPP---PKGTGSPPPPPTGEPQDLSGEGN 153
Query: 794 XQKXPPPPXXXRGKXPXXXXG 856
+ PPPP G P G
Sbjct: 154 ASRRPPPPPKGTGSPPPPPTG 174
Score = 33.5 bits (73), Expect = 0.22
Identities = 24/81 (29%), Positives = 28/81 (34%), Gaps = 9/81 (11%)
Frame = +2
Query: 641 PXPPRGXXXIXPPKRGXP----GXXXXSXXPPXKKFFPQXAXGGPPXXKGPXR-----GG 793
P PP+G PP G P G S PP P+ PP G + G
Sbjct: 128 PPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPP---PKGTGSPPPPPTGEPQDLSTEGN 184
Query: 794 XQKXPPPPXXXRGKXPXXXXG 856
+ PPPP G P G
Sbjct: 185 ASRRPPPPPKGTGTPPPPPTG 205
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/78 (26%), Positives = 25/78 (32%), Gaps = 6/78 (7%)
Frame = +2
Query: 641 PXPPRGXXXIXPPKRGXPGXXXXSXXPPXKKFFPQXAXGGP-PXXKGPXR-----GGXQK 802
P PP+G PP G P + P G P P G + G +
Sbjct: 190 PPPPKGTGTPPPPPTGEPQDLSAEGYASRRPPPPPKGTGSPTPPPTGEPQDLSGEGNASR 249
Query: 803 XPPPPXXXRGKXPXXXXG 856
PPPP G P G
Sbjct: 250 RPPPPPKGTGSPPPPPTG 267
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 31.9 bits (69), Expect = 0.66
Identities = 27/86 (31%), Positives = 28/86 (32%), Gaps = 6/86 (6%)
Frame = +2
Query: 674 PPKRGXPGXXXXSXXPPXK----KFFPQXAX--GGPPXXKGPXRGGXQKXPPPPXXXRGK 835
PP G PG S PP F P A GGPP P PP P G
Sbjct: 191 PPSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGA 250
Query: 836 XPXXXXGPNPXHKKKXPXXXPXXKPP 913
P P P + P P PP
Sbjct: 251 PPSGGP-PGPFNPSGAP---PSGGPP 272
Score = 31.9 bits (69), Expect = 0.66
Identities = 27/86 (31%), Positives = 28/86 (32%), Gaps = 6/86 (6%)
Frame = +2
Query: 674 PPKRGXPGXXXXSXXPPXK----KFFPQXAX--GGPPXXKGPXRGGXQKXPPPPXXXRGK 835
PP G PG S PP F P A GGPP P PP P G
Sbjct: 281 PPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGA 340
Query: 836 XPXXXXGPNPXHKKKXPXXXPXXKPP 913
P P P + P P PP
Sbjct: 341 PPSGGP-PGPFNPSGAP---PSGGPP 362
Score = 31.9 bits (69), Expect = 0.66
Identities = 27/86 (31%), Positives = 28/86 (32%), Gaps = 6/86 (6%)
Frame = +2
Query: 674 PPKRGXPGXXXXSXXPPXK----KFFPQXAX--GGPPXXKGPXRGGXQKXPPPPXXXRGK 835
PP G PG S PP F P A GGPP P PP P G
Sbjct: 371 PPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGA 430
Query: 836 XPXXXXGPNPXHKKKXPXXXPXXKPP 913
P P P + P P PP
Sbjct: 431 PPSGGP-PGPFNPSGAP---PSGGPP 452
Score = 31.9 bits (69), Expect = 0.66
Identities = 27/86 (31%), Positives = 28/86 (32%), Gaps = 6/86 (6%)
Frame = +2
Query: 674 PPKRGXPGXXXXSXXPPXK----KFFPQXAX--GGPPXXKGPXRGGXQKXPPPPXXXRGK 835
PP G PG S PP F P A GGPP P PP P G
Sbjct: 401 PPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGA 460
Query: 836 XPXXXXGPNPXHKKKXPXXXPXXKPP 913
P P P + P P PP
Sbjct: 461 PPSGGP-PGPFNPSGAP---PSGGPP 482
Score = 31.9 bits (69), Expect = 0.66
Identities = 27/86 (31%), Positives = 28/86 (32%), Gaps = 6/86 (6%)
Frame = +2
Query: 674 PPKRGXPGXXXXSXXPPXK----KFFPQXAX--GGPPXXKGPXRGGXQKXPPPPXXXRGK 835
PP G PG S PP F P A GGPP P PP P G
Sbjct: 431 PPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGA 490
Query: 836 XPXXXXGPNPXHKKKXPXXXPXXKPP 913
P P P + P P PP
Sbjct: 491 PPSGGP-PGPFNPSGAP---PSGGPP 512
Score = 31.1 bits (67), Expect = 1.1
Identities = 27/86 (31%), Positives = 27/86 (31%), Gaps = 6/86 (6%)
Frame = +2
Query: 674 PPKRGXPGXXXXSXXPPXK----KFFPQXAX--GGPPXXKGPXRGGXQKXPPPPXXXRGK 835
PP G PG S PP F P A GGPP P PP P G
Sbjct: 221 PPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGA 280
Query: 836 XPXXXXGPNPXHKKKXPXXXPXXKPP 913
P P P P P PP
Sbjct: 281 PPSGGP-PGPFDPSGAP---PSGGPP 302
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/62 (33%), Positives = 21/62 (33%), Gaps = 6/62 (9%)
Frame = +2
Query: 674 PPKRGXPGXXXXSXXPPXK----KFFPQXAX--GGPPXXKGPXRGGXQKXPPPPXXXRGK 835
PP G PG S PP F P A GGPP P PP P G
Sbjct: 461 PPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGA 520
Query: 836 XP 841
P
Sbjct: 521 PP 522
Score = 29.5 bits (63), Expect = 3.5
Identities = 21/71 (29%), Positives = 23/71 (32%)
Frame = +2
Query: 674 PPKRGXPGXXXXSXXPPXKKFFPQXAXGGPPXXKGPXRGGXQKXPPPPXXXRGKXPXXXX 853
PP G PG S PP GGPP P PP P G P
Sbjct: 146 PPSGGPPGPFDPSGAPPS---------GGPPGLFDPSGAPPSGGPPGPFGPSGAPPSGGP 196
Query: 854 GPNPXHKKKXP 886
P P + + P
Sbjct: 197 -PGPFNPSEAP 206
Score = 28.7 bits (61), Expect = 6.1
Identities = 24/80 (30%), Positives = 24/80 (30%)
Frame = +2
Query: 674 PPKRGXPGXXXXSXXPPXKKFFPQXAXGGPPXXKGPXRGGXQKXPPPPXXXRGKXPXXXX 853
PP G PG S PP GGPP P PP P G P
Sbjct: 326 PPSGGPPGPFDPSGAPPS---------GGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGP 376
Query: 854 GPNPXHKKKXPXXXPXXKPP 913
P P P P PP
Sbjct: 377 -PGPFDPSGAP---PSGGPP 392
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 30.7 bits (66), Expect = 1.5
Identities = 23/76 (30%), Positives = 23/76 (30%), Gaps = 3/76 (3%)
Frame = +2
Query: 641 PXPPRGXXXIXPPKRGXPGXXXXSXXPPXKKFFPQXAXGGPPXXKGPXRGGXQKX---PP 811
P PPRG PP G PP PP RGG PP
Sbjct: 297 PPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPPFFPPP 356
Query: 812 PPXXXRGKXPXXXXGP 859
PP R P GP
Sbjct: 357 PPHFMRPSSPPTDGGP 372
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 30.7 bits (66), Expect = 1.5
Identities = 23/76 (30%), Positives = 23/76 (30%), Gaps = 3/76 (3%)
Frame = +2
Query: 641 PXPPRGXXXIXPPKRGXPGXXXXSXXPPXKKFFPQXAXGGPPXXKGPXRGGXQKX---PP 811
P PPRG PP G PP PP RGG PP
Sbjct: 297 PPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPPFFPPP 356
Query: 812 PPXXXRGKXPXXXXGP 859
PP R P GP
Sbjct: 357 PPHFMRPSSPPTDGGP 372
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.7 bits (66), Expect = 1.5
Identities = 25/95 (26%), Positives = 30/95 (31%)
Frame = +1
Query: 628 KXXXSPPPPGXXXXKXPKKGXTRXXXXFXXPPXEKIFPPXGXGGXXXPKRXPPXGXTKXX 807
K +PPPP K ++ ++ PP I PP G G
Sbjct: 506 KSPPTPPPPAPGPHKEQRRSTSKDPPRPAPPPVSSIPPPPPIAGLLAAN-----GTNVPI 560
Query: 808 PPPXXXXGKXPXXXXGAXPXPQKKXPPGXXXGKTP 912
PPP P GA P P PP G P
Sbjct: 561 PPPPPP--PLPQNLSGAPPPP--PPPPPMLGGPPP 591
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 2/40 (5%)
Frame = +2
Query: 719 PPXKKFFPQXAXGG--PPXXKGPXRGGXQKXPPPPXXXRG 832
PP PQ G PP P GG PPPP G
Sbjct: 562 PPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPPGGLMG 601
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.3 bits (65), Expect = 2.0
Identities = 25/71 (35%), Positives = 25/71 (35%), Gaps = 3/71 (4%)
Frame = +1
Query: 709 FXXPPXEKIF--PPXGXGGXXXPKRXPPXGXTKXXPPPXXXXG-KXPXXXXGAXPXPQKK 879
F PP F PP G GG P PP PPP G P GA P P
Sbjct: 64 FIPPPVPNGFIPPPPGPGGIPPP---PPMFAGGIPPPPPMMGGIPPPPPMFGAPPPP--- 117
Query: 880 XPPGXXXGKTP 912
PP G P
Sbjct: 118 -PPPSGLGVAP 127
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/58 (25%), Positives = 20/58 (34%)
Frame = +2
Query: 740 PQXAXGGPPXXKGPXRGGXQKXPPPPXXXRGKXPXXXXGPNPXHKKKXPXXXPXXKPP 913
P A PP Q+ PP P + + P P P ++ P P PP
Sbjct: 319 PTRAAPAPPKPAPQQAPPVQQNPPKPAVQQAQAPVVQQAPAPPVQQAPPKPTPQQAPP 376
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/61 (31%), Positives = 21/61 (34%), Gaps = 4/61 (6%)
Frame = +3
Query: 642 PXPPGGX----KX*XPQKGGNPGPXXXPXXPPXKNFSPXXPXGXXPXXKXPXXGXXKKXP 809
P PPG K P K G PG P PP + P P P + P P
Sbjct: 102 PGPPGPAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGP 161
Query: 810 P 812
P
Sbjct: 162 P 162
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/61 (31%), Positives = 21/61 (34%), Gaps = 4/61 (6%)
Frame = +3
Query: 642 PXPPGGX----KX*XPQKGGNPGPXXXPXXPPXKNFSPXXPXGXXPXXKXPXXGXXKKXP 809
P PPG K P K G PG P PP + P P P + P P
Sbjct: 102 PGPPGPAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPWKPCPQGPPGPPGPPGP 161
Query: 810 P 812
P
Sbjct: 162 P 162
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/61 (31%), Positives = 21/61 (34%), Gaps = 4/61 (6%)
Frame = +3
Query: 642 PXPPGGX----KX*XPQKGGNPGPXXXPXXPPXKNFSPXXPXGXXPXXKXPXXGXXKKXP 809
P PPG K P K G PG P PP + P P P + P P
Sbjct: 102 PGPPGPAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGP 161
Query: 810 P 812
P
Sbjct: 162 P 162
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 4/39 (10%)
Frame = +2
Query: 755 GGPPXXKGPXRGGXQKXPP----PPXXXRGKXPXXXXGP 859
GGPP G GG PP PP RG+ P P
Sbjct: 625 GGPPRGPGGGGGGGPTGPPAPPKPPAKPRGRPPRKSISP 663
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 4/39 (10%)
Frame = +2
Query: 755 GGPPXXKGPXRGGXQKXPP----PPXXXRGKXPXXXXGP 859
GGPP G GG PP PP RG+ P P
Sbjct: 625 GGPPRGPGGGGGGGPTGPPAPPKPPAKPRGRPPRKSISP 663
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 28.7 bits (61), Expect = 6.1
Identities = 20/64 (31%), Positives = 22/64 (34%)
Frame = +2
Query: 674 PPKRGXPGXXXXSXXPPXKKFFPQXAXGGPPXXKGPXRGGXQKXPPPPXXXRGKXPXXXX 853
P G PG + P + Q GGPP GP PP P G P
Sbjct: 125 PGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGP---AGPPGPPGPDGNPGS-PAGPS 180
Query: 854 GPNP 865
GP P
Sbjct: 181 GPGP 184
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 28.7 bits (61), Expect = 6.1
Identities = 20/64 (31%), Positives = 22/64 (34%)
Frame = +2
Query: 674 PPKRGXPGXXXXSXXPPXKKFFPQXAXGGPPXXKGPXRGGXQKXPPPPXXXRGKXPXXXX 853
P G PG + P + Q GGPP GP PP P G P
Sbjct: 125 PGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGP---AGPPGPPGPDGNPGS-PAGPS 180
Query: 854 GPNP 865
GP P
Sbjct: 181 GPGP 184
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +2
Query: 761 PPXXKGPXRGGXQKXPPPPXXXRGKXPXXXXGPNPXHKKKXPXXXPXXKPP 913
PP K G PPPP R P P P P PP
Sbjct: 126 PPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPP 176
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 28.7 bits (61), Expect = 6.1
Identities = 20/64 (31%), Positives = 22/64 (34%)
Frame = +2
Query: 674 PPKRGXPGXXXXSXXPPXKKFFPQXAXGGPPXXKGPXRGGXQKXPPPPXXXRGKXPXXXX 853
P G PG + P + Q GGPP GP PP P G P
Sbjct: 125 PGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGP---AGPPGPPGPDGNPGS-PAGPS 180
Query: 854 GPNP 865
GP P
Sbjct: 181 GPGP 184
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 28.7 bits (61), Expect = 6.1
Identities = 20/64 (31%), Positives = 22/64 (34%)
Frame = +2
Query: 674 PPKRGXPGXXXXSXXPPXKKFFPQXAXGGPPXXKGPXRGGXQKXPPPPXXXRGKXPXXXX 853
P G PG + P + Q GGPP GP PP P G P
Sbjct: 125 PGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGP---AGPPGPPGPDGNPGS-PAGPS 180
Query: 854 GPNP 865
GP P
Sbjct: 181 GPGP 184
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/57 (28%), Positives = 17/57 (29%)
Frame = +1
Query: 742 PXGXGGXXXPKRXPPXGXTKXXPPPXXXXGKXPXXXXGAXPXPQKKXPPGXXXGKTP 912
P G P R P PPP + P G P PPG K P
Sbjct: 110 PGAPGQPGTPGRPPQQPCEPTTPPPCQPCPQGPPGPPGQPGIPGDNGPPGEQGPKGP 166
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +2
Query: 740 PQXAXGGPPXXKGPXRGGXQKXPPPPXXXRGKXPXXXXGPNP 865
P GGP GP RGG + PP P G+ G P
Sbjct: 155 PPGPPGGPGELGGPGRGG-NRGPPGPRGPPGEAGPDGEGGRP 195
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +2
Query: 740 PQXAXGGPPXXKGPXRGGXQKXPPPPXXXRGKXPXXXXGPNP 865
P GGP GP RGG + PP P G+ G P
Sbjct: 155 PPGPPGGPGELGGPGRGG-NRGPPGPRGPPGEAGPDGEGGRP 195
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/48 (29%), Positives = 14/48 (29%)
Frame = +2
Query: 722 PXKKFFPQXAXGGPPXXKGPXRGGXQKXPPPPXXXRGKXPXXXXGPNP 865
P P PP P G PPPP G P P P
Sbjct: 475 PPSSLLPLINTNAPPPPPMPSINGHAPNPPPPPPLLGIAPMSTNAPPP 522
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 28.3 bits (60), Expect = 8.1
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = +2
Query: 647 PPRGXXXIXPPKRGXPGXXXXSXXPPXKKFFPQXAXGGPPXXKGPXRGGXQKXPPPP 817
PPRG PP RG P P P G P + P G PP P
Sbjct: 151 PPRGMPGAYPPPRGYPPAPAPGVYMP-----PPGMPGAYPPPRMPIGHGPPGGPPMP 202
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 28.3 bits (60), Expect = 8.1
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = +2
Query: 647 PPRGXXXIXPPKRGXPGXXXXSXXPPXKKFFPQXAXGGPPXXKGPXRGGXQKXPPPP 817
PPRG PP RG P P P G P + P G PP P
Sbjct: 151 PPRGMPGAYPPPRGYPPAPAPGVYMP-----PPGMPGAYPPPRMPIGHGPPGGPPMP 202
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +2
Query: 719 PPXKKFFPQXAXGGPPXXKGPXRGGXQKXPPPP 817
PP P A G PP P G PPPP
Sbjct: 220 PPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPP 252
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +2
Query: 719 PPXKKFFPQXAXGGPPXXKGPXRGGXQKXPPPP 817
PP P A G PP P G PPPP
Sbjct: 206 PPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPP 238
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +2
Query: 719 PPXKKFFPQXAXGGPPXXKGPXRGGXQKXPPPP 817
PP P A G PP P G PPPP
Sbjct: 206 PPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPP 238
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.309 0.142 0.480
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,125,812
Number of Sequences: 27780
Number of extensions: 249932
Number of successful extensions: 873
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 583
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (22.0 bits)
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