Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_K19
         (821 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0507 + 3777505-3777762,3780286-3780390,3780740-3780796,378...    30   1.9  
11_06_0132 - 20431122-20431477,20431739-20433758                       29   4.5  

>07_01_0507 +
           3777505-3777762,3780286-3780390,3780740-3780796,
           3781534-3781863
          Length = 249

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
 Frame = -1

Query: 359 NQWEEKFYYQGPNKIQDLDTCWK--PPPLTQFINNTFGHVTKPFVTVW 222
           + WE +F    P   ++LD  WK   PP+ ++ +    H   P   VW
Sbjct: 132 HDWEFRFTIAAPEYWRNLDPSWKHTGPPMRRYFHPDGYHSADPHDAVW 179


>11_06_0132 - 20431122-20431477,20431739-20433758
          Length = 791

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 15/57 (26%), Positives = 25/57 (43%)
 Frame = +2

Query: 68  VXXLCKPACLTLNPHLIDTFIVLSLITTAVGVKXIVKLFRFYSLKYSRTYEXIPLQT 238
           V  L  P C +  PH    F+V+ ++ + V    ++ LF     +Y +    IP  T
Sbjct: 411 VPDLHLPRCTSQAPHRRQKFLVIPIVVSLVATLLLLLLFYKLLARYKKIKSKIPSTT 467


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,312,243
Number of Sequences: 37544
Number of extensions: 318718
Number of successful extensions: 520
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 511
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2256438528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)