Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_K18
         (859 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0415 - 21940466-21941536                                         29   3.6  
08_01_0481 + 4229084-4229262,4231083-4231148,4233138-4233255,423...    29   6.3  
05_06_0131 - 25888434-25888931,25889105-25889155,25889249-258893...    28   8.3  

>01_05_0415 - 21940466-21941536
          Length = 356

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +1

Query: 58  ELARLRLDEVFLHIFGADSFIYNVYE 135
           ELAR+RLDE+  H+ G D   Y+ Y+
Sbjct: 260 ELARVRLDEIAFHLLGTDE-TYDGYK 284


>08_01_0481 +
           4229084-4229262,4231083-4231148,4233138-4233255,
           4233620-4233711,4233805-4233883,4233959-4234052,
           4234296-4234408,4234811-4234856,4235364-4235404,
           4235492-4235647
          Length = 327

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -3

Query: 536 RVSEHRRVAHMTDHVCCGPKHEHENVN-HDLHRHPDQP 426
           +V  +R V    DHVCC  K   E  N  +L + P+QP
Sbjct: 207 KVHGYRAVICGMDHVCCESKSWMETANVENLSKGPNQP 244


>05_06_0131 -
           25888434-25888931,25889105-25889155,25889249-25889331,
           25889733-25889826,25890188-25890310,25890909-25891154
          Length = 364

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -1

Query: 448 CTDIQTSPRTHQVRFFPQSAD 386
           C  IQ+S RTH VRF  QS++
Sbjct: 240 CHQIQSSNRTHPVRFSEQSSE 260


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,751,897
Number of Sequences: 37544
Number of extensions: 354983
Number of successful extensions: 871
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 871
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)