Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_K18
         (859 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF047663-6|AAC04447.1|  368|Caenorhabditis elegans Hypothetical ...    31   0.79 
U80455-10|AAB37887.2|  395|Caenorhabditis elegans Activated in b...    31   1.1  
AL031627-13|CAA20964.1|  304|Caenorhabditis elegans Hypothetical...    30   1.8  
U21309-3|AAN73880.2|  143|Caenorhabditis elegans Hypothetical pr...    29   5.6  
AL031627-15|CAA20966.1|  318|Caenorhabditis elegans Hypothetical...    28   7.4  
AL021503-1|CAA16420.2|  309|Caenorhabditis elegans Hypothetical ...    28   7.4  
U67952-1|AAB07577.2|  414|Caenorhabditis elegans Hypothetical pr...    28   9.8  

>AF047663-6|AAC04447.1|  368|Caenorhabditis elegans Hypothetical
           protein W09G12.7 protein.
          Length = 368

 Score = 31.5 bits (68), Expect = 0.79
 Identities = 13/46 (28%), Positives = 25/46 (54%)
 Frame = -3

Query: 587 ANKDQHVETN*ES*KFQRVSEHRRVAHMTDHVCCGPKHEHENVNHD 450
           + KD   +++ E  +  + S  +   H   H CCG ++EHE+ +H+
Sbjct: 297 SRKDGDHDSDMEESEKSKKSSKKDHNHHHHHCCCGAQNEHEHTHHE 342


>U80455-10|AAB37887.2|  395|Caenorhabditis elegans Activated in
           blocked unfolded proteinresponse protein 11 protein.
          Length = 395

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = -1

Query: 400 PQSADKHDGCQEQCDTMCQNDS--CQNAIRQNSF 305
           PQ       CQ+QC T CQ+D    Q  I+Q ++
Sbjct: 138 PQQQQPQQQCQQQCQTTCQSDDQYSQQLIQQQTY 171


>AL031627-13|CAA20964.1|  304|Caenorhabditis elegans Hypothetical
           protein Y102A5C.23 protein.
          Length = 304

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
 Frame = +3

Query: 450 IMIYVLMFVFWTTTNMVSHMGDTSMLGYAL--EFLTLLIRFYML-VLVC 587
           I+IY ++  F+   N V+H  D  +L Y +   F  ++I +Y++ VL C
Sbjct: 34  IIIYTIVLPFYICANKVNHERDKEILIYPITKHFYHMVIIYYLIFVLTC 82


>U21309-3|AAN73880.2|  143|Caenorhabditis elegans Hypothetical
           protein C13B9.1 protein.
          Length = 143

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = -1

Query: 499 TMFVVVQNTNMRT*IMICTDIQTSPRTHQVRFFPQSADKHDGCQEQCDTMCQN-DSCQNA 323
           T+F ++  TN +  +M C D  + P+   V+ F    D H    E C+   +N + C+  
Sbjct: 12  TIFFLISTTNSKAAVMRCLDFHSVPQERTVKKF-LLEDSHLMRVEVCNLCARNLEICECG 70

Query: 322 IRQ 314
            +Q
Sbjct: 71  SQQ 73


>AL031627-15|CAA20966.1|  318|Caenorhabditis elegans Hypothetical
           protein Y102A5C.25 protein.
          Length = 318

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
 Frame = +3

Query: 426 GLVWMSVQIMIYVLMFVFWTTTNMVSHMGDTSMLGYAL--EFLTLLIRFYMLVL 581
           GL++ +  I+IY ++  F+   N V+H  D  +L Y +   F  ++I +Y++ +
Sbjct: 27  GLLFFAC-IIIYTVVLPFYIYANKVNHERDKEILIYPITNHFYKMVIVYYLIFI 79


>AL021503-1|CAA16420.2|  309|Caenorhabditis elegans Hypothetical
           protein Y68A4A.2 protein.
          Length = 309

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = +3

Query: 450 IMIYVLMFVFWTTTNMVSHMGDTSMLGYAL-EFLTLLIRFYMLVLVCKLLRF 602
           I+IY ++  F+  TN V+H  D  M  Y +      +++   LV V     F
Sbjct: 35  IIIYTILLPFYLFTNKVNHKRDNEMFIYPITAHFCQMVKVSYLVFVSACFNF 86


>U67952-1|AAB07577.2|  414|Caenorhabditis elegans Hypothetical
           protein F39B3.2 protein.
          Length = 414

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 20/84 (23%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
 Frame = +3

Query: 432 VWMSVQIMIYVLMFVFWTTTNMVSHM-GDTSMLGYALEFLTLLIRFYMLVLVCK--LLRF 602
           + + + I  +++  +  T  +++ H+ G ++ +   L  L + I  +++VL C      F
Sbjct: 274 IMLVLVIAKFLVSDILPTVIDVLEHVVGQSAFMRSPLASLFVDISNFLIVLNCSSNFWVF 333

Query: 603 ARKGQRIRRETQKFEQSTLVQLCL 674
              G+R RR  +K  +STL+  C+
Sbjct: 334 FVWGKRFRRSCRKCIKSTLIGACI 357


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,759,328
Number of Sequences: 27780
Number of extensions: 328011
Number of successful extensions: 1076
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1067
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)