Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_K17
         (888 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_1008 - 7987936-7988628,7988923-7989102                           37   0.019
11_04_0025 + 12382485-12382823,12382835-12382894,12382960-123830...    28   8.6  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.6  
06_01_1042 + 8187536-8187616,8187713-8188315                           28   8.6  

>01_01_1008 - 7987936-7988628,7988923-7989102
          Length = 290

 Score = 37.1 bits (82), Expect = 0.019
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = -2

Query: 710 RKRHASRREKGGQVSGKRQGRNRRAXRGSFQGETPG 603
           R R   RR  GG+V+G+   R+RR  RG+++GE  G
Sbjct: 239 RVRRRGRRGGGGEVNGEEAARSRRRRRGAWEGEEEG 274


>11_04_0025 +
           12382485-12382823,12382835-12382894,12382960-12383073,
           12383187-12383837
          Length = 387

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 19/65 (29%), Positives = 24/65 (36%)
 Frame = +3

Query: 600 DTRRFPLEAPSXRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV*VVRSKLGCVHE 779
           DTR+ P  +P    P P+ PL       L       +HS     L    VV+ KL     
Sbjct: 69  DTRKTPSASPKRTPPTPSAPLLKRKHLSLILFCNYFTHSRSFINLKKKTVVKKKLAAAAS 128

Query: 780 PPVQP 794
            P  P
Sbjct: 129 KPAPP 133


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +2

Query: 287 NESAN---ARGEAVCVLGALPLPRSLTRCAR 370
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>06_01_1042 + 8187536-8187616,8187713-8188315
          Length = 227

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 22/67 (32%), Positives = 30/67 (44%)
 Frame = -2

Query: 824 DDSTX*GAAVGLNGGFVHTAQLGANDLHRTEIPTA*AMRKRHASRREKGGQVSGKRQGRN 645
           D ST  G  +G++       +  A    RTE   A  +  R A   E+G +  G R+ R 
Sbjct: 35  DRSTTLGTLMGVSAFGGGGQRRAARTPARTERERA-PLAARPAGEEEEGRRAGGWRRRRR 93

Query: 644 RRAXRGS 624
           RR  RGS
Sbjct: 94  RRQRRGS 100


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,321,419
Number of Sequences: 37544
Number of extensions: 545222
Number of successful extensions: 1650
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1646
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)