Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_K13
         (875 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0160 - 18624952-18625106,18625411-18625535,18625954-186260...   135   4e-32
04_03_1020 - 21761297-21761555,21761630-21761739,21762402-217626...    29   4.9  
08_01_0244 + 2016548-2017101,2017392-2019681,2019785-2019817           29   6.5  
06_03_0099 + 16633928-16638213,16638299-16638386,16638823-166389...    29   6.5  
06_01_0248 - 1871955-1872199,1872289-1872447,1873139-1873237,187...    28   8.5  
03_05_0697 + 26888791-26888861,26890468-26890579,26891561-268917...    28   8.5  
02_03_0349 + 18010414-18014283                                         28   8.5  

>05_04_0160 -
           18624952-18625106,18625411-18625535,18625954-18626087,
           18626221-18626298,18626456-18626561,18627739-18627836
          Length = 231

 Score =  135 bits (327), Expect = 4e-32
 Identities = 75/171 (43%), Positives = 101/171 (59%), Gaps = 7/171 (4%)
 Frame = +2

Query: 167 SHVSCYCEENVWKLCQDV---SLRVPEELDRCYVVFISNPCRTVPLWKQRAGREEDRLVI 337
           +H   YCEENV  LC+++    +  P   +  Y VFISN  + VPLW Q+A    D  V+
Sbjct: 27  THTPYYCEENVHLLCKELIRSGISDPAGTN-LYAVFISNEEKKVPLWYQKASHSGDGFVL 85

Query: 338 WDYHVIFLYSVDIKS---CLVYDLDSELPFPTFFHKYVTETFRTDQVLKSDFHRFFRVVT 508
           WDYHVI + S         LV+DLDS LPFP  F +YV++  R      S + R FRV+ 
Sbjct: 86  WDYHVICIQSRRKNGEVLDLVWDLDSSLPFPCSFIQYVSDAIRPLSFGNSTYRRLFRVIH 145

Query: 509 AKQFLQLFSSDRRHMKRPDGSWIKPPPPYPAI-STSVSTHNLDEYINMDVD 658
           A  FL+ F+SDR HMK   G+WI+ PP Y +I +   +T+NL+EYI M +D
Sbjct: 146 APVFLRSFASDRSHMKDHAGNWIQLPPKYESIVAEDGTTNNLNEYITMSMD 196


>04_03_1020 -
           21761297-21761555,21761630-21761739,21762402-21762635,
           21762710-21762817,21762910-21762969,21763549-21763624,
           21763710-21763870,21764485-21764547,21764657-21764744,
           21765062-21765592,21766344-21766783
          Length = 709

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +2

Query: 533 SSDRRHMKRPDGSWIKPPPPYPAISTSVSTHNLDEYI 643
           SS  R  K+ + S + P PP+P  S   +++NL  Y+
Sbjct: 642 SSPLRQFKQSNWSCL-PSPPHPTFSNGATSYNLSSYM 677


>08_01_0244 + 2016548-2017101,2017392-2019681,2019785-2019817
          Length = 958

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +2

Query: 557 RPDGSWIKPPPPYPAISTSVSTHNLDEYINMDVDTGPGQVYNLT 688
           +P+ +  + P   P++ T   + N+D+  +M   +GPG V NL+
Sbjct: 492 KPEIAASQLPQFIPSVQTGTESINIDKVSDMGGQSGPGTVGNLS 535


>06_03_0099 +
           16633928-16638213,16638299-16638386,16638823-16638950,
           16640008-16640278
          Length = 1590

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 20/59 (33%), Positives = 26/59 (44%)
 Frame = +2

Query: 512 KQFLQLFSSDRRHMKRPDGSWIKPPPPYPAISTSVSTHNLDEYINMDVDTGPGQVYNLT 688
           +Q + L  S RR  K  D   IK         TS+   N DE   MD+D     V+N+T
Sbjct: 623 QQVVALTDSRRRSEKLTD---IKMDSTSNVSRTSLKQRNSDEVNQMDIDDRSNSVHNIT 678


>06_01_0248 -
           1871955-1872199,1872289-1872447,1873139-1873237,
           1873420-1873589,1874420-1874868
          Length = 373

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +2

Query: 488 RFFRVVTAKQFLQLFSSDRRHMKRPDGSWIKPPPPYPAIST 610
           RF R +     L   SS +R+   P+     PPP Y A+ T
Sbjct: 43  RFLRSLLTNDLLLSSSSQQRYAPTPNAPARAPPPAYAALLT 83


>03_05_0697 + 26888791-26888861,26890468-26890579,26891561-26891757,
            26892215-26892266,26893530-26893795,26894007-26894229,
            26895154-26895327,26895408-26895485,26895566-26895817,
            26896138-26898204,26899477-26901322,26901474-26901574,
            26902179-26902535,26902681-26902799,26903558-26903559,
            26903630-26903662,26903709-26903841,26904285-26904537,
            26905688-26905912,26906401-26906466,26907373-26907471,
            26908528-26908545,26908546-26908893,26909878-26910354
          Length = 2522

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -2

Query: 727  VLLVNFVETLDKICQVVDLPRSCVY 653
            V +V F++ LD +CQ  D+P S +Y
Sbjct: 1101 VAMVEFIKGLDPVCQEKDIPFSRLY 1125


>02_03_0349 + 18010414-18014283
          Length = 1289

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -1

Query: 461  LCEKFLLHICGKMLEMVILNQDHIQ 387
            L E++LLH C  + E+V+ N  H+Q
Sbjct: 1196 LPEEYLLHNCHALEELVLTNASHLQ 1220


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,742,820
Number of Sequences: 37544
Number of extensions: 499684
Number of successful extensions: 1379
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1375
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)