Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_K13
(875 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK001066-1|BAA91488.1| 205|Homo sapiens protein ( Homo sapiens ... 200 7e-51
BC008781-1|AAH08781.1| 205|Homo sapiens chromosome 8 open readi... 198 2e-50
BC103660-1|AAI03661.1| 544|Homo sapiens RBM15 protein protein. 31 5.5
BC103507-1|AAI03508.1| 969|Homo sapiens RBM15 protein protein. 31 5.5
BC103493-1|AAI03494.1| 969|Homo sapiens RBM15 protein protein. 31 5.5
BC098140-1|AAH98140.1| 969|Homo sapiens RBM15 protein protein. 31 5.5
BC062316-1|AAH62316.1| 957|Homo sapiens RBM15 protein protein. 31 5.5
BC047479-1|AAH47479.1| 959|Homo sapiens RBM15 protein protein. 31 5.5
BC006397-1|AAH06397.2| 957|Homo sapiens RBM15 protein protein. 31 5.5
AL355488-1|CAI19077.1| 977|Homo sapiens RNA binding motif prote... 31 5.5
AK025596-1|BAB15185.1| 532|Homo sapiens protein ( Homo sapiens ... 31 5.5
AK022541-1|BAB14088.1| 925|Homo sapiens protein ( Homo sapiens ... 31 5.5
AJ303090-1|CAC38829.1| 1883|Homo sapiens OTT-MAL protein. 31 5.5
AJ303089-1|CAC38828.1| 1905|Homo sapiens OTT-MAL protein. 31 5.5
AJ297259-2|CAC38862.1| 969|Homo sapiens one twenty two protein ... 31 5.5
AJ297259-1|CAC38861.1| 957|Homo sapiens one twenty two protein ... 31 5.5
AF368064-1|AAK54724.1| 957|Homo sapiens putative RNA-binding mo... 31 5.5
AF368063-1|AAK54723.1| 977|Homo sapiens putative RNA-binding mo... 31 5.5
AF368062-1|AAK54722.1| 969|Homo sapiens putative RNA-binding mo... 31 5.5
BC112891-1|AAI12892.1| 1887|Homo sapiens ASCC3L1 protein protein. 31 7.2
BC065924-1|AAH65924.1| 1821|Homo sapiens ASCC3L1 protein protein. 31 7.2
BC007577-1|AAH07577.1| 1308|Homo sapiens ASCC3L1 protein protein. 31 7.2
AY572488-1|AAS78571.1| 2136|Homo sapiens 200 kDa U5 snRNP-specif... 31 7.2
AK024391-1|BAB14906.1| 1811|Homo sapiens protein ( Homo sapiens ... 31 7.2
AB018331-1|BAA34508.2| 2026|Homo sapiens KIAA0788 protein protein. 31 7.2
>AK001066-1|BAA91488.1| 205|Homo sapiens protein ( Homo sapiens
cDNA FLJ10204 fis, clone HEMBA1004933. ).
Length = 205
Score = 200 bits (487), Expect = 7e-51
Identities = 89/190 (46%), Positives = 120/190 (63%)
Frame = +2
Query: 137 KPLFPKREECSHVSCYCEENVWKLCQDVSLRVPEELDRCYVVFISNPCRTVPLWKQRAGR 316
+P P R+ C + SCYCEEN+WKLC+ + L+ CY VFISN + +P+WKQ+A R
Sbjct: 12 QPASPPRDACVYSSCYCEENIWKLCEYIKNHDQYPLEECYAVFISNERKMIPIWKQQA-R 70
Query: 317 EEDRLVIWDYHVIFLYSVDIKSCLVYDLDSELPFPTFFHKYVTETFRTDQVLKSDFHRFF 496
D VIWDYHV+ L+ +YDLD+ LPFP F YV + F++D + F R F
Sbjct: 71 PGDGPVIWDYHVVLLHVSSGGQNFIYDLDTVLPFPCLFDTYVEDAFKSDDDIHPQFRRKF 130
Query: 497 RVVTAKQFLQLFSSDRRHMKRPDGSWIKPPPPYPAISTSVSTHNLDEYINMDVDTGPGQV 676
RV+ A +L+ F+SDR HMK G+W +PPPPYP I T S NL+++I+MD G G V
Sbjct: 131 RVIRADSYLKNFASDRSHMKDSSGNWREPPPPYPCIETGDSKMNLNDFISMDPKVGWGAV 190
Query: 677 YNLTDFVQRF 706
Y L++F RF
Sbjct: 191 YTLSEFTHRF 200
>BC008781-1|AAH08781.1| 205|Homo sapiens chromosome 8 open reading
frame 32 protein.
Length = 205
Score = 198 bits (484), Expect = 2e-50
Identities = 89/190 (46%), Positives = 119/190 (62%)
Frame = +2
Query: 137 KPLFPKREECSHVSCYCEENVWKLCQDVSLRVPEELDRCYVVFISNPCRTVPLWKQRAGR 316
+P P R+ C + SCYCEENVWKLC+ + L+ CY VFISN + +P+WKQ+A R
Sbjct: 12 QPASPPRDACVYSSCYCEENVWKLCEYIKNHDQYPLEECYAVFISNERKMIPIWKQQA-R 70
Query: 317 EEDRLVIWDYHVIFLYSVDIKSCLVYDLDSELPFPTFFHKYVTETFRTDQVLKSDFHRFF 496
D VIWDYHV+ L+ +YDLD+ LPFP F YV + ++D + F R F
Sbjct: 71 PGDGPVIWDYHVVLLHVSSGGQSFIYDLDTVLPFPCLFDTYVEDAIKSDDDIHPQFRRKF 130
Query: 497 RVVTAKQFLQLFSSDRRHMKRPDGSWIKPPPPYPAISTSVSTHNLDEYINMDVDTGPGQV 676
RV+ A +L+ F+SDR HMK G+W +PPPPYP I T S NL+++I+MD G G V
Sbjct: 131 RVICADSYLKNFASDRSHMKDSSGNWREPPPPYPCIETGDSKMNLNDFISMDPKVGWGAV 190
Query: 677 YNLTDFVQRF 706
Y L++F RF
Sbjct: 191 YTLSEFTHRF 200
>BC103660-1|AAI03661.1| 544|Homo sapiens RBM15 protein protein.
Length = 544
Score = 31.1 bits (67), Expect = 5.5
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 527 LFSSDRRHMKRPDGSWIKPPPPYPAISTSVSTHNLDEYINMD 652
L DR PD W+ PPPP ST + ++ Y +D
Sbjct: 146 LLYRDRDRDLYPDSDWVPPPPPVRERSTRTAATSVPAYEPLD 187
>BC103507-1|AAI03508.1| 969|Homo sapiens RBM15 protein protein.
Length = 969
Score = 31.1 bits (67), Expect = 5.5
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 527 LFSSDRRHMKRPDGSWIKPPPPYPAISTSVSTHNLDEYINMD 652
L DR PD W+ PPPP ST + ++ Y +D
Sbjct: 571 LLYRDRDRDLYPDSDWVPPPPPVRERSTRTAATSVPAYEPLD 612
>BC103493-1|AAI03494.1| 969|Homo sapiens RBM15 protein protein.
Length = 969
Score = 31.1 bits (67), Expect = 5.5
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 527 LFSSDRRHMKRPDGSWIKPPPPYPAISTSVSTHNLDEYINMD 652
L DR PD W+ PPPP ST + ++ Y +D
Sbjct: 571 LLYRDRDRDLYPDSDWVPPPPPVRERSTRTAATSVPAYEPLD 612
>BC098140-1|AAH98140.1| 969|Homo sapiens RBM15 protein protein.
Length = 969
Score = 31.1 bits (67), Expect = 5.5
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 527 LFSSDRRHMKRPDGSWIKPPPPYPAISTSVSTHNLDEYINMD 652
L DR PD W+ PPPP ST + ++ Y +D
Sbjct: 571 LLYRDRDRDLYPDSDWVPPPPPVRERSTRTAATSVPAYEPLD 612
>BC062316-1|AAH62316.1| 957|Homo sapiens RBM15 protein protein.
Length = 957
Score = 31.1 bits (67), Expect = 5.5
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 527 LFSSDRRHMKRPDGSWIKPPPPYPAISTSVSTHNLDEYINMD 652
L DR PD W+ PPPP ST + ++ Y +D
Sbjct: 551 LLYRDRDRDLYPDSDWVPPPPPVRERSTRTAATSVPAYEPLD 592
>BC047479-1|AAH47479.1| 959|Homo sapiens RBM15 protein protein.
Length = 959
Score = 31.1 bits (67), Expect = 5.5
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 527 LFSSDRRHMKRPDGSWIKPPPPYPAISTSVSTHNLDEYINMD 652
L DR PD W+ PPPP ST + ++ Y +D
Sbjct: 561 LLYRDRDRDLYPDSDWVPPPPPVRERSTRTAATSVPAYEPLD 602
>BC006397-1|AAH06397.2| 957|Homo sapiens RBM15 protein protein.
Length = 957
Score = 31.1 bits (67), Expect = 5.5
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 527 LFSSDRRHMKRPDGSWIKPPPPYPAISTSVSTHNLDEYINMD 652
L DR PD W+ PPPP ST + ++ Y +D
Sbjct: 551 LLYRDRDRDLYPDSDWVPPPPPVRERSTRTAATSVPAYEPLD 592
>AL355488-1|CAI19077.1| 977|Homo sapiens RNA binding motif protein
15 protein.
Length = 977
Score = 31.1 bits (67), Expect = 5.5
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 527 LFSSDRRHMKRPDGSWIKPPPPYPAISTSVSTHNLDEYINMD 652
L DR PD W+ PPPP ST + ++ Y +D
Sbjct: 571 LLYRDRDRDLYPDSDWVPPPPPVRERSTRTAATSVPAYEPLD 612
>AK025596-1|BAB15185.1| 532|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21943 fis, clone HEP04547. ).
Length = 532
Score = 31.1 bits (67), Expect = 5.5
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 527 LFSSDRRHMKRPDGSWIKPPPPYPAISTSVSTHNLDEYINMD 652
L DR PD W+ PPPP ST + ++ Y +D
Sbjct: 146 LLYRDRDRDLYPDSDWVPPPPPVRERSTRTAATSVPAYEPLD 187
>AK022541-1|BAB14088.1| 925|Homo sapiens protein ( Homo sapiens
cDNA FLJ12479 fis, clone NT2RM1001059, weakly similar to
NUCLEAR POLYADENYLATED RNA-BINDING PROTEIN NAB4. ).
Length = 925
Score = 31.1 bits (67), Expect = 5.5
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 527 LFSSDRRHMKRPDGSWIKPPPPYPAISTSVSTHNLDEYINMD 652
L DR PD W+ PPPP ST + ++ Y +D
Sbjct: 527 LLYRDRDRDLYPDSDWVPPPPPVRERSTRTAATSVPAYEPLD 568
>AJ303090-1|CAC38829.1| 1883|Homo sapiens OTT-MAL protein.
Length = 1883
Score = 31.1 bits (67), Expect = 5.5
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 527 LFSSDRRHMKRPDGSWIKPPPPYPAISTSVSTHNLDEYINMD 652
L DR PD W+ PPPP ST + ++ Y +D
Sbjct: 571 LLYRDRDRDLYPDSDWVPPPPPVRERSTRTAATSVPAYEPLD 612
>AJ303089-1|CAC38828.1| 1905|Homo sapiens OTT-MAL protein.
Length = 1905
Score = 31.1 bits (67), Expect = 5.5
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 527 LFSSDRRHMKRPDGSWIKPPPPYPAISTSVSTHNLDEYINMD 652
L DR PD W+ PPPP ST + ++ Y +D
Sbjct: 571 LLYRDRDRDLYPDSDWVPPPPPVRERSTRTAATSVPAYEPLD 612
>AJ297259-2|CAC38862.1| 969|Homo sapiens one twenty two protein
protein.
Length = 969
Score = 31.1 bits (67), Expect = 5.5
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 527 LFSSDRRHMKRPDGSWIKPPPPYPAISTSVSTHNLDEYINMD 652
L DR PD W+ PPPP ST + ++ Y +D
Sbjct: 571 LLYRDRDRDLYPDSDWVPPPPPVRERSTRTAATSVPAYEPLD 612
>AJ297259-1|CAC38861.1| 957|Homo sapiens one twenty two protein
protein.
Length = 957
Score = 31.1 bits (67), Expect = 5.5
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 527 LFSSDRRHMKRPDGSWIKPPPPYPAISTSVSTHNLDEYINMD 652
L DR PD W+ PPPP ST + ++ Y +D
Sbjct: 571 LLYRDRDRDLYPDSDWVPPPPPVRERSTRTAATSVPAYEPLD 612
>AF368064-1|AAK54724.1| 957|Homo sapiens putative RNA-binding motif
protein 15 long form protein.
Length = 957
Score = 31.1 bits (67), Expect = 5.5
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 527 LFSSDRRHMKRPDGSWIKPPPPYPAISTSVSTHNLDEYINMD 652
L DR PD W+ PPPP ST + ++ Y +D
Sbjct: 571 LLYRDRDRDLYPDSDWVPPPPPVRERSTRTAATSVPAYEPLD 612
>AF368063-1|AAK54723.1| 977|Homo sapiens putative RNA-binding motif
protein 15 short form plus alternative exon protein.
Length = 977
Score = 31.1 bits (67), Expect = 5.5
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 527 LFSSDRRHMKRPDGSWIKPPPPYPAISTSVSTHNLDEYINMD 652
L DR PD W+ PPPP ST + ++ Y +D
Sbjct: 571 LLYRDRDRDLYPDSDWVPPPPPVRERSTRTAATSVPAYEPLD 612
>AF368062-1|AAK54722.1| 969|Homo sapiens putative RNA-binding motif
protein 15 short form protein.
Length = 969
Score = 31.1 bits (67), Expect = 5.5
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 527 LFSSDRRHMKRPDGSWIKPPPPYPAISTSVSTHNLDEYINMD 652
L DR PD W+ PPPP ST + ++ Y +D
Sbjct: 571 LLYRDRDRDLYPDSDWVPPPPPVRERSTRTAATSVPAYEPLD 612
>BC112891-1|AAI12892.1| 1887|Homo sapiens ASCC3L1 protein protein.
Length = 1887
Score = 30.7 bits (66), Expect = 7.2
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -1
Query: 866 NGNRSQIYFLGMYKNNY*QITKHNQXXPIIKII*TKLYLGLSRLHFCTTC 717
N + +Q L M K Y ITKH+ P+I + ++ L+ + TTC
Sbjct: 1282 NISHTQTRLLSMAKPVYHAITKHSPKKPVIVFVPSRKQTRLTAIDILTTC 1331
>BC065924-1|AAH65924.1| 1821|Homo sapiens ASCC3L1 protein protein.
Length = 1821
Score = 30.7 bits (66), Expect = 7.2
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -1
Query: 866 NGNRSQIYFLGMYKNNY*QITKHNQXXPIIKII*TKLYLGLSRLHFCTTC 717
N + +Q L M K Y ITKH+ P+I + ++ L+ + TTC
Sbjct: 1216 NISHTQTRLLSMAKPVYHAITKHSPKKPVIVFVPSRKQTRLTAIDILTTC 1265
>BC007577-1|AAH07577.1| 1308|Homo sapiens ASCC3L1 protein protein.
Length = 1308
Score = 30.7 bits (66), Expect = 7.2
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -1
Query: 866 NGNRSQIYFLGMYKNNY*QITKHNQXXPIIKII*TKLYLGLSRLHFCTTC 717
N + +Q L M K Y ITKH+ P+I + ++ L+ + TTC
Sbjct: 703 NISHTQTRLLSMAKPVYHAITKHSPKKPVIVFVPSRKQTRLTAIDILTTC 752
>AY572488-1|AAS78571.1| 2136|Homo sapiens 200 kDa U5 snRNP-specific
spliceosomal protein protein.
Length = 2136
Score = 30.7 bits (66), Expect = 7.2
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -1
Query: 866 NGNRSQIYFLGMYKNNY*QITKHNQXXPIIKII*TKLYLGLSRLHFCTTC 717
N + +Q L M K Y ITKH+ P+I + ++ L+ + TTC
Sbjct: 1531 NISHTQTRLLSMAKPVYHAITKHSPKKPVIVFVPSRKQTRLTAIDILTTC 1580
>AK024391-1|BAB14906.1| 1811|Homo sapiens protein ( Homo sapiens cDNA
FLJ14329 fis, clone PLACE4000259, highly similar to
H.sapiens gene for U5 snRNP-specific 200kD protein. ).
Length = 1811
Score = 30.7 bits (66), Expect = 7.2
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -1
Query: 866 NGNRSQIYFLGMYKNNY*QITKHNQXXPIIKII*TKLYLGLSRLHFCTTC 717
N + +Q L M K Y ITKH+ P+I + ++ L+ + TTC
Sbjct: 1206 NISHTQTRLLSMAKPVYHAITKHSPKKPVIVFVPSRKQTRLTAIDILTTC 1255
>AB018331-1|BAA34508.2| 2026|Homo sapiens KIAA0788 protein protein.
Length = 2026
Score = 30.7 bits (66), Expect = 7.2
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -1
Query: 866 NGNRSQIYFLGMYKNNY*QITKHNQXXPIIKII*TKLYLGLSRLHFCTTC 717
N + +Q L M K Y ITKH+ P+I + ++ L+ + TTC
Sbjct: 1421 NISHTQTRLLSMAKPVYHAITKHSPKKPVIVFVPSRKQTRLTAIDILTTC 1470
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,023,998
Number of Sequences: 237096
Number of extensions: 2823017
Number of successful extensions: 10885
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 10516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10880
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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