Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_K11
         (973 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0479 + 3606663-3607448                                           31   1.8  
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    30   3.2  
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    29   4.2  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   5.6  
02_01_0475 + 3422629-3422695,3422960-3423216                           29   5.6  

>07_01_0479 + 3606663-3607448
          Length = 261

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 19/64 (29%), Positives = 20/64 (31%)
 Frame = -3

Query: 704 GXPPXXAPXXXXXXPXGPPXXXGXXXXPPPXGXRNTXXPPXXXAXXXPXXRXDXGXQKKK 525
           G PP   P      P GPP         PP G R    PP       P      G Q+  
Sbjct: 200 GPPPPPGPFMRGPPPMGPPQVRPGMPGGPPPGMRPGMPPPPFRPGMPP---PPPGPQQPG 256

Query: 524 XXPP 513
             PP
Sbjct: 257 QNPP 260



 Score = 28.3 bits (60), Expect = 9.8
 Identities = 14/44 (31%), Positives = 14/44 (31%)
 Frame = -3

Query: 716 PGXXGXPPXXAPXXXXXXPXGPPXXXGXXXXPPPXGXRNTXXPP 585
           P   G PP   P      P GPP        PPP        PP
Sbjct: 207 PFMRGPPPMGPPQVRPGMPGGPPPGMRPGMPPPPFRPGMPPPPP 250


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 33/140 (23%), Positives = 36/140 (25%), Gaps = 3/140 (2%)
 Frame = -3

Query: 752  GGXGXXXXXXXXP---GXXGXPPXXAPXXXXXXPXGPPXXXGXXXXPPPXGXRNTXXPPX 582
            GG G        P   G  G PP   P      P  PP   G     PP        PP 
Sbjct: 1128 GGLGGHQAPPAPPLPEGIGGVPPPP-PVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPP- 1185

Query: 581  XXAXXXPXXRXDXGXQKKKXXPPXGGXXSLGXXXKAPPPPRXXKXKXTRPXGXXXLGSXX 402
                  P  R   G       P              PPPP   +     P G   +G   
Sbjct: 1186 -----PPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPPGGRGLPAPPGGRGVVGHGL 1240

Query: 401  XRPXXAXXXVVAVDXTLEQL 342
             R         A   TL+ L
Sbjct: 1241 TRSLGLNSAATARRSTLKPL 1260


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 20/81 (24%), Positives = 23/81 (28%)
 Frame = -3

Query: 704 GXPPXXAPXXXXXXPXGPPXXXGXXXXPPPXGXRNTXXPPXXXAXXXPXXRXDXGXQKKK 525
           G PP   P          P        PPP    N    P   A   P        ++  
Sbjct: 688 GPPPPPPPPLPPANRTNGPGVPSAPPPPPPPPPANRSNGPSAPAPPLPPPLPAAANKRNP 747

Query: 524 XXPPXGGXXSLGXXXKAPPPP 462
             PP     + G    APPPP
Sbjct: 748 PAPPPPPLMT-GKKAPAPPPP 767


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 22/79 (27%), Positives = 22/79 (27%)
 Frame = -3

Query: 698 PPXXAPXXXXXXPXGPPXXXGXXXXPPPXGXRNTXXPPXXXAXXXPXXRXDXGXQKKKXX 519
           PP   P      P  PP        PPP G      PP   A   P      G       
Sbjct: 314 PPPPPPKPAAAAPPPPPPPKAAPPPPPPKGP-----PPPPPAKGPPPPPPPKGPSPPPPP 368

Query: 518 PPXGGXXSLGXXXKAPPPP 462
           PP G           PPPP
Sbjct: 369 PPGGKKGG------PPPPP 381


>02_01_0475 + 3422629-3422695,3422960-3423216
          Length = 107

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 16/35 (45%), Positives = 17/35 (48%)
 Frame = +2

Query: 161 KXKKHXKKXXKKQKXKKXXKKKXVKXKXVPASGGG 265
           K KK  KK  KK+K KK  KKK      V   G G
Sbjct: 50  KKKKKKKKKKKKKKKKKKKKKKNKLSSAVTNLGAG 84


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,911,553
Number of Sequences: 37544
Number of extensions: 176901
Number of successful extensions: 295
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 240
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2823252340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)