Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_K09
         (889 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0020 + 147147-147313,148450-148548,148634-148742,148856-14...    57   2e-08
05_01_0021 - 148084-148191,148387-148488,148641-148727,148845-14...    47   2e-05
05_05_0266 - 23694466-23696787,23696885-23697187                       29   3.7  
01_06_1133 + 34781799-34782071,34782168-34783166,34783252-347836...    29   4.9  
04_03_0521 + 16765347-16767324,16769202-16769392                       29   6.5  
01_01_0033 + 260562-260661,260895-260941,261582-261681,261925-26...    29   6.5  
05_04_0181 + 18799445-18799593,18801112-18801163,18801964-188019...    28   8.6  

>01_01_0020 +
           147147-147313,148450-148548,148634-148742,148856-148927,
           149056-149061,150811-150915,151048-151539,151629-152025,
           152178-153646,154010-154450,154543-155214
          Length = 1342

 Score = 57.2 bits (132), Expect = 2e-08
 Identities = 41/148 (27%), Positives = 71/148 (47%)
 Frame = +3

Query: 123 MAAKLLYFVLFIAAAVSADDEPVLARLLVSKQVLNKYLVENMDILVKYTLFNVGSAPAVE 302
           MA  +L  +L  AAA ++ D P L           K  VE +   V   L+N GSA A +
Sbjct: 3   MARSILLLLLLAAAASASADAPFLVAHKKVSLSRPKPGVERL--AVSLDLYNQGSATAYD 60

Query: 303 VKLVDNGFHPDVFTVVGGQLTAEIDRIAPQTNVSHVVTVRSNKYGYFNFSSAEVTYKASE 482
           V + D+ +  + F +V G+++  ++R+ P    SH   + +   G F  S A +TY+   
Sbjct: 61  VSINDDTWPKEAFELVSGEMSKTLERLDPGVTASHAFVLETKVQGRFQGSPAVITYRVPT 120

Query: 483 DATDVQYSISSAPGEGAIVAFKDYDRKF 566
            A  +Q + S+      ++A +  ++KF
Sbjct: 121 KAA-LQEAYSTPILALDVLAERPPEKKF 147


>05_01_0021 -
           148084-148191,148387-148488,148641-148727,148845-148979,
           149109-149324,149772-150043,151346-151394,151521-151526,
           151657-151728,152077-152185,152272-152370,153186-153364
          Length = 477

 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 1/145 (0%)
 Frame = +3

Query: 135 LLYFVLFIAAAVSADDEPVLARLLVSKQVLNKYLVENMDILVKYTLFNVGSAPAVEVKLV 314
           LL  +L   AA +  D P +  +   K  L++       + V   L+N GSA A +V L 
Sbjct: 11  LLLLLLVPFAAAAGQDAPFV--VAQKKVALSRPGPGVERLAVTLNLYNQGSATAYDVSLN 68

Query: 315 DNGFHPDVFTVVGGQLTAEIDRIAPQTNVSHVVTVRSNKYGYFNFSSAEVTYKA-SEDAT 491
           D+ +  + F ++ G  +  ++++ P    SH   + +   G F  S A +TY+  ++ A 
Sbjct: 69  DDSWPQEAFQLISGTTSKIVEKLDPGATASHNFILETKVQGKFQGSPAIITYRVPTKAAL 128

Query: 492 DVQYSISSAPGEGAIVAFKDYDRKF 566
              YS    P +  I+A +   +KF
Sbjct: 129 QEAYSTPMFPLD--ILAERPPQQKF 151


>05_05_0266 - 23694466-23696787,23696885-23697187
          Length = 874

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +3

Query: 144 FVLFIAAAVSADDEPVLARLLVSKQVLNKYL 236
           F+LF+  A+S    PVLAR+L   ++LN  L
Sbjct: 196 FLLFLGVALSVTAFPVLARILAEVKLLNSDL 226


>01_06_1133 +
           34781799-34782071,34782168-34783166,34783252-34783663,
           34783727-34784670
          Length = 875

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +3

Query: 144 FVLFIAAAVSADDEPVLARLLVSKQVLNKYL 236
           F+LF+  A+S    PVLAR+L   ++LN  L
Sbjct: 186 FLLFLGVALSVTAFPVLARILAEIKLLNTEL 216


>04_03_0521 + 16765347-16767324,16769202-16769392
          Length = 722

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = +3

Query: 204 LVSKQVLNKYLVENMDILVKYTLFNVGSAPAVEVKLVDNGFHPDVFT 344
           ++ + VL K L+ N  I     +  +  A ++  K+VD+G  PD+FT
Sbjct: 74  MMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFT 120


>01_01_0033 +
           260562-260661,260895-260941,261582-261681,261925-262181,
           262525-262640,263014-263098,264236-264415,264740-264817,
           264909-264970,265138-265246,266237-266514,266591-266657,
           266734-266802,266880-266981,267309-267443
          Length = 594

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +3

Query: 135 LLYFVLFIAAAVSADDEPVLARLLVSKQVLNK 230
           + +++L  A  +S  D PV+ARL+  K V+ K
Sbjct: 264 ITFYLLMKAEGLSVQDHPVIARLVEIKSVVEK 295


>05_04_0181 +
           18799445-18799593,18801112-18801163,18801964-18801999,
           18802098-18802233,18802313-18802512
          Length = 190

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +3

Query: 351 GGQLTAEIDRIAPQTNVSHVVTVRSNKYGYFNFSSAEVTY 470
           GG  TA+ +    Q +    +T  +  YGY NFS  EV +
Sbjct: 150 GGSSTAQHEIGPSQLDEPPPITQPTQDYGYINFSGVEVAH 189


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,625,801
Number of Sequences: 37544
Number of extensions: 422307
Number of successful extensions: 1023
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1022
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)