Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_K08
(869 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025724-10|AAG23372.2| 1073|Caenorhabditis elegans Hypothetical... 30 1.9
AL110490-16|CAB54451.2| 922|Caenorhabditis elegans Hypothetical... 29 5.7
AF040642-10|AAB94949.2| 576|Caenorhabditis elegans Hypothetical... 29 5.7
AL022716-4|CAA18773.1| 703|Caenorhabditis elegans Hypothetical ... 28 7.5
Z66497-4|CAA91284.1| 401|Caenorhabditis elegans Hypothetical pr... 28 10.0
U23168-4|AAU87833.1| 1379|Caenorhabditis elegans Temporarily ass... 28 10.0
U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily ass... 28 10.0
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 28 10.0
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 28 10.0
AC006655-5|AAF39873.1| 172|Caenorhabditis elegans Hypothetical ... 28 10.0
>AC025724-10|AAG23372.2| 1073|Caenorhabditis elegans Hypothetical
protein Y67D8C.9 protein.
Length = 1073
Score = 30.3 bits (65), Expect = 1.9
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Frame = -1
Query: 527 SRGLKWLPSVSATTISTPSLELHPSELQSSTCIWYLPPFFTLKAADVALPAPLQ-TSFLS 351
S K L + +ST + ++ S LQS + Y P F A++A + + T+ S
Sbjct: 944 SHDQKLLRRTARAIVSTKNAVVYASALQSDFSLHYNPTFRKYLWAEIAKMSTFEKTALFS 1003
Query: 350 SRTLDLSAASPV--HTFQ-LTETSAASFLVTSW 261
+ + D+ AS + H+ + + E L+T+W
Sbjct: 1004 TNSTDILPASRILLHSVKTIDELQQIRGLLTNW 1036
>AL110490-16|CAB54451.2| 922|Caenorhabditis elegans Hypothetical
protein Y48B6A.11 protein.
Length = 922
Score = 28.7 bits (61), Expect = 5.7
Identities = 20/78 (25%), Positives = 29/78 (37%)
Frame = +1
Query: 304 WNVWTGDAADKSRVLLDKKEVWSGAGSATSAAFKVKKGGRYQMQVELCNSDGCSSSEGVE 483
W W G + + KKEV + + A K+ K R +SDG S S G E
Sbjct: 413 WTYWYGGGRELW-IPKKKKEVPKKRRQSLADASKIAKRARLGASSTATDSDGSSGSSGSE 471
Query: 484 IVVADTDGSHLRPLDYSI 537
+ P Y++
Sbjct: 472 EATEGSSFMRALPAGYTV 489
>AF040642-10|AAB94949.2| 576|Caenorhabditis elegans Hypothetical
protein C50D2.1 protein.
Length = 576
Score = 28.7 bits (61), Expect = 5.7
Identities = 28/127 (22%), Positives = 52/127 (40%), Gaps = 1/127 (0%)
Frame = +1
Query: 298 VNWNVWTGDAADKSRVLLDKKEVWSGAGSATSAAFKVKKGGRYQMQVELCNSDGCSSSEG 477
V++ W G +D L ++ WS + ++ + G + + + G +G
Sbjct: 408 VDFGTWGGGYSDN----LGVRDFWSQTQEYGANWYEGQYGYKTGWSIPIVQGIGVEGGQG 463
Query: 478 VEIVVADTDGSHLRPLDYSIGEKNKPFKQTSGKVVGAYFVEWGV-YPRKFPVDRVPVPNL 654
++ V +G RP+ + G PF + + VG ++ GV + + F V V V
Sbjct: 464 TQVSVPIKEGELGRPISVTNGYHVGPFMGLADR-VGVDWLNGGVSWNKGFAVPFVGVGVN 522
Query: 655 THLLYGF 675
T GF
Sbjct: 523 TGTAVGF 529
>AL022716-4|CAA18773.1| 703|Caenorhabditis elegans Hypothetical
protein C24F3.4 protein.
Length = 703
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +1
Query: 31 GIP*XF*CLAVGCEARLTFTCLLFCRTSYGASDDSA-RIQRW 153
G+P F L C A L LLF R G +DD+ R RW
Sbjct: 91 GLPTRFRGLLYNCAAALRNGKLLFIRAKMGLADDNVYRESRW 132
>Z66497-4|CAA91284.1| 401|Caenorhabditis elegans Hypothetical
protein K08F8.2 protein.
Length = 401
Score = 27.9 bits (59), Expect = 10.0
Identities = 24/104 (23%), Positives = 45/104 (43%)
Frame = -1
Query: 509 LPSVSATTISTPSLELHPSELQSSTCIWYLPPFFTLKAADVALPAPLQTSFLSSRTLDLS 330
+ S+ A+++ T L S + S + L P + P TS +S S
Sbjct: 132 IASLQASSMLTVPLLQAASHIPSMLQLCQLQPTTIQSPVYASTQQPASTS--ASSLFSSS 189
Query: 329 AASPVHTFQLTETSAASFLVTSWL*AVAAWLTSTIANVRSPQPR 198
++S H F+ +E++ SF +S + + + +V PQP+
Sbjct: 190 SSSAFHPFRPSESAQQSFPSSSVIVKIERRSPDSSTDVNMPQPQ 233
>U23168-4|AAU87833.1| 1379|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform d protein.
Length = 1379
Score = 27.9 bits (59), Expect = 10.0
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -3
Query: 684 NRNEAVEQMSQVRNRNAVHRELSR-IHTPFDEVSAHHFSRS 565
NR+E E S+ + N++H E S H+ ++ S H+ S
Sbjct: 1301 NRSELREMRSEEKRSNSMHHEESHYAHSSYEHTSEHYSQSS 1341
>U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform b protein.
Length = 4034
Score = 27.9 bits (59), Expect = 10.0
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -3
Query: 684 NRNEAVEQMSQVRNRNAVHRELSR-IHTPFDEVSAHHFSRS 565
NR+E E S+ + N++H E S H+ ++ S H+ S
Sbjct: 1301 NRSELREMRSEEKRSNSMHHEESHYAHSSYEHTSEHYSQSS 1341
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform c protein.
Length = 7548
Score = 27.9 bits (59), Expect = 10.0
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -3
Query: 684 NRNEAVEQMSQVRNRNAVHRELSR-IHTPFDEVSAHHFSRS 565
NR+E E S+ + N++H E S H+ ++ S H+ S
Sbjct: 1301 NRSELREMRSEEKRSNSMHHEESHYAHSSYEHTSEHYSQSS 1341
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 27.9 bits (59), Expect = 10.0
Identities = 15/57 (26%), Positives = 25/57 (43%)
Frame = -1
Query: 371 LQTSFLSSRTLDLSAASPVHTFQLTETSAASFLVTSWL*AVAAWLTSTIANVRSPQP 201
+Q + S T+D S + + +L E +++W A L S +RSP P
Sbjct: 97 VQNATTFSATIDSSTSQKLSQIELPEHLTVPSAISTWFPVQYAVLPSLFFEIRSPPP 153
>AC006655-5|AAF39873.1| 172|Caenorhabditis elegans Hypothetical
protein H10D18.1 protein.
Length = 172
Score = 27.9 bits (59), Expect = 10.0
Identities = 8/29 (27%), Positives = 20/29 (68%)
Frame = +1
Query: 229 VEVNQAATAYNQLVTKKDAADVSVNWNVW 315
+E+++ AY Q+++ K +D ++ WN++
Sbjct: 3 LEISEKIKAYRQVMSAKSPSDAALTWNLF 31
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,082,047
Number of Sequences: 27780
Number of extensions: 398149
Number of successful extensions: 1169
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1095
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1169
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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