Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_K07
         (883 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0122 + 20333025-20333468                                         81   2e-15
12_02_0365 + 18045340-18045783                                         80   3e-15
07_01_1132 + 10531922-10532136,10532307-10532433,10532945-105331...    30   2.1  
03_01_0192 - 1534013-1535147,1535249-1535370,1535497-1535556,153...    30   2.8  
09_06_0287 + 22047404-22048409,22048754-22049967                       29   3.7  

>11_06_0122 + 20333025-20333468
          Length = 147

 Score = 80.6 bits (190), Expect = 2e-15
 Identities = 42/93 (45%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
 Frame = +3

Query: 252 MAKNTSKVGKKT-NEEIFAG-FQTLRNEQRQLGSKISELQMELNEHKIVIETLRGVELTR 425
           MA      GK+  NE+I A  +  +R+E  QL +KI+EL+ME++EH +VI  +  ++ +R
Sbjct: 1   MASKAGGDGKEAINEQIIANTYGNMRSEMTQLYTKITELEMEVSEHSLVIGAIEPLDHSR 60

Query: 426 KCFRMFGGVLVERTVAEVLPELISNYEQLPKAI 524
           +C+RM GGVLVERT+ EVLP +  N E L + I
Sbjct: 61  RCYRMVGGVLVERTIREVLPAVHRNKEGLEEVI 93


>12_02_0365 + 18045340-18045783
          Length = 147

 Score = 79.8 bits (188), Expect = 3e-15
 Identities = 41/93 (44%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
 Frame = +3

Query: 252 MAKNTSKVGKKT-NEEIFAG-FQTLRNEQRQLGSKISELQMELNEHKIVIETLRGVELTR 425
           MA   S   K+  NE++ A  +  +R+E  QL SKI+EL+ME++EH +VI  +  ++ +R
Sbjct: 1   MAGQPSGADKEVINEQMVANMYANMRSEMNQLYSKITELEMEVSEHSLVIGAIEPLDPSR 60

Query: 426 KCFRMFGGVLVERTVAEVLPELISNYEQLPKAI 524
           +C+RM GGVLVERT+ EVLP +  N E L + +
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVV 93


>07_01_1132 +
           10531922-10532136,10532307-10532433,10532945-10533100,
           10533755-10533847,10534010-10534090,10534205-10534276,
           10534608-10534676,10534764-10534874,10535039-10535089
          Length = 324

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
 Frame = +3

Query: 261 NTSKVGKKTNEEIFAGFQTLRNEQRQLGSKIS-ELQME-LNEHKIVIETLRGVELTRKCF 434
           N+ ++  K N+  F+G Q      R+LG+ +  ++ ++ LN      + L  ++   K  
Sbjct: 217 NSKQIKAKVNKYAFSGGQDTVELHRELGANLDVDVSIKYLNFFLQDDDELEHIKKEYKAG 276

Query: 435 RMFGGVLVERTVAEVLPELISNYEQ 509
           RM  G + +R + EVL EL++ +++
Sbjct: 277 RMLTGEVKQRLI-EVLSELVARHQR 300


>03_01_0192 -
           1534013-1535147,1535249-1535370,1535497-1535556,
           1535666-1535764,1535839-1535889,1535974-1536175,
           1536709-1536911,1537264-1537350,1537435-1537589,
           1537640-1537723,1538121-1538325,1538497-1538724
          Length = 876

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = +3

Query: 270 KVGKKTNEEIFAGFQTLRNEQRQLGSKISELQMELNEHKIVIETLRG-VELTRK 428
           KV  +  EEI    +    +QR+    IS+LQ    E ++++ETLR  +E TR+
Sbjct: 357 KVNAEAQEEIKRQAEAHLRQQREQKEVISKLQESEKEIRLLVETLRSKLEDTRE 410


>09_06_0287 + 22047404-22048409,22048754-22049967
          Length = 739

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +1

Query: 580 EEHDIRIQRADRTMPEPPPEQSTSTKSNVLIA 675
           + + +R++R + + P+PPP Q     + VLIA
Sbjct: 207 DSYQVRLRRLNPSPPQPPPPQGAGDPTVVLIA 238


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,204,958
Number of Sequences: 37544
Number of extensions: 410115
Number of successful extensions: 1166
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1165
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)