Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_K06
(919 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit Smc6|Schizosac... 44 2e-05
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 40 5e-04
SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces pomb... 39 9e-04
SPBC336.08 |spc24||spindle pole body protein Spc24|Schizosacchar... 38 0.003
SPAC17C9.11c |||zinc finger protein, zf-C2H2 type/UBA domain pro... 34 0.032
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 33 0.075
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.23
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 31 0.30
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 30 0.40
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 30 0.40
SPAC1687.18c |ssl3||cohesin loading factor Ssl3|Schizosaccharomy... 30 0.40
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 30 0.53
SPBC13G1.03c |pex14||peroxisomal membrane anchor protein|Schizos... 29 0.70
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 29 0.70
SPBC13E7.06 |msd1|mug172|spindle pole body protein Msd1|Schizosa... 29 1.2
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 29 1.2
SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces ... 29 1.2
SPCC285.14 |||TRAPP complex subunit Trs130 |Schizosaccharomyces ... 27 2.8
SPAC16C9.06c |upf1||ATP-dependent RNA helicase Upf1|Schizosaccha... 27 2.8
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 27 3.7
SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28 |Schizo... 27 3.7
SPBC2G5.05 |||transketolase |Schizosaccharomyces pombe|chr 2|||M... 27 3.7
SPAC7D4.04 |taf1||Taz1 interacting factor 1|Schizosaccharomyces ... 27 3.7
SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces pom... 27 3.7
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 4.9
SPBC365.07c |||TATA element modulatory factor homolog |Schizosac... 27 4.9
SPAPB1E7.03 |rpc82||DNA-directed RNA polymerase III complex subu... 27 4.9
SPAC1851.04c ||SPAC27D7.01c|guanyl-nucleotide exchange factor |S... 27 4.9
SPAC26F1.09 |gyp51||GTPase activating protein Gyp51 |Schizosacch... 27 4.9
SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence orphan|Sc... 27 4.9
SPAC8C9.07 |||rRNA processing protein Fyv7 |Schizosaccharomyces ... 27 4.9
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 27 4.9
SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||M... 26 6.5
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 26 6.5
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 26 6.5
SPAC13A11.01c |rga8|SPAC2F7.18c|GTPase activating protein Rga8 |... 26 8.6
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 26 8.6
SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|c... 26 8.6
>SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit
Smc6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1140
Score = 44.4 bits (100), Expect = 2e-05
Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 14/155 (9%)
Frame = +3
Query: 123 KNETSKLRKSSEKEYHSLRASYDQMRSYEEFEQQIQQLQNEYYWREVVEVETEAHDAETQ 302
K S L K E+EY L ++Q R E ++Q + E W +VVEVE E AE +
Sbjct: 289 KTGVSYLAKK-EEEYKLL---WEQSRETENLHNLLEQKKGEMVWAQVVEVEKELLLAEKE 344
Query: 303 YNTVCKKITELTQKGQDI----EQIHRTGLSALEVLKRERDEKSLQKNALQQDVSTYES- 467
+ K++E + + I I S EV+ R + E K+ + V T++
Sbjct: 345 FQHAEVKLSEAKENLESIVTNQSDIDGKISSKEEVIGRAKGETDTTKSKFEDIVKTFDGY 404
Query: 468 ---------QAREAQSSLRTVQQTVQKYQDRFDRE 545
Q R+ Q+S+ + + Y+++ + E
Sbjct: 405 RSEMNDVDIQKRDIQNSINAAKSCLDVYREQLNTE 439
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 39.9 bits (89), Expect = 5e-04
Identities = 37/165 (22%), Positives = 73/165 (44%), Gaps = 5/165 (3%)
Frame = +3
Query: 108 QV*TFKNETSKLRKSSEKEYHSLRASYDQMRSYEEFEQQIQQLQNEYYWREVVEVETEAH 287
++ + K S+ ++ + S + QM+ +Q+ NE+ R++ E E +
Sbjct: 454 EITSLKQTVSESEAERKRLFSSAQEKQLQMKETVNKLTSLQEQNNEFD-RQLKEQEEDLQ 512
Query: 288 DAETQYNTVCKKITELTQKGQDIEQIHRTGLSALEVLKRER-DEKSLQKNALQQDVSTYE 464
+ E + + K + E TQ Q + + +E L+ ER D K +N S YE
Sbjct: 513 NKEEELTELRKLLREQTQDSQKLRLL-------VEQLELERQDLKQAGENHYSNLSSDYE 565
Query: 465 SQAREAQSSLRTVQQTVQKYQDRFDREXKKV----LDLXEGDREY 587
+Q + +SSL Q +Q++ + ++ L L E +++Y
Sbjct: 566 TQIKSLESSLTNSQAECVSFQEKINELNSQIDELKLKLNEANKKY 610
>SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 952
Score = 39.1 bits (87), Expect = 9e-04
Identities = 39/157 (24%), Positives = 76/157 (48%), Gaps = 2/157 (1%)
Frame = +3
Query: 120 FKNETSK--LRKSSEKEYHSLRASYDQMRSYEEFEQQIQQLQNEYYWREVVEVETEAHDA 293
F +E ++ L+KS +L+ + ++ SYEE ++ QN + E++T+ D
Sbjct: 276 FNSEAARQLLQKSLSIVASNLKQAENKTISYEE---KLSIAQNS-----INEIQTQNRDL 327
Query: 294 ETQYNTVCKKITELTQKGQDIEQIHRTGLSALEVLKRERDEKSLQKNALQQDVSTYESQA 473
+ + + +I L ++ Q +++ ALE +K DEK+L++ + YE++
Sbjct: 328 KLETEKLQDQIKALLERNQSLQE-------ALETVKN--DEKNLREMN-----ANYETEM 373
Query: 474 REAQSSLRTVQQTVQKYQDRFDREXKKVLDLXEGDRE 584
+EA+ L + + Y D F + K+ L E RE
Sbjct: 374 KEARQKLNNKEALISHYDDDFRAKELKISRLSESLRE 410
>SPBC336.08 |spc24||spindle pole body protein
Spc24|Schizosaccharomyces pombe|chr 2|||Manual
Length = 198
Score = 37.5 bits (83), Expect = 0.003
Identities = 19/88 (21%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Frame = +3
Query: 273 ETEAHDAETQYNTVCKKITELTQKGQDIEQIHRTGLSALEVLKRERDEKSLQK--NALQQ 446
E E ++T++ + +K+ TQ + ++Q + A E+L RE+++ + K N +
Sbjct: 40 EKELEGSQTKFKVLSRKLEISTQAMESLKQTAESSQHAEEILSREKEKFRIAKLLNITEN 99
Query: 447 DVSTYESQAREAQSSLRTVQQTVQKYQD 530
++ + ESQ ++ + L +++ +D
Sbjct: 100 EIMSLESQLQKMKEQLLQLEERENTSED 127
>SPAC17C9.11c |||zinc finger protein, zf-C2H2 type/UBA domain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 240
Score = 33.9 bits (74), Expect = 0.032
Identities = 33/139 (23%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Frame = +3
Query: 129 ETSKLRKSSEK-EYHSLRASYDQM---------RSYEEFEQQIQQLQNEYYWREVVEVET 278
E KL S E E+HS + S+DQ RS EE +Q I+ L+ + ++ E
Sbjct: 7 ECDKLLSSIEMAEFHSTKTSHDQFEETEEEIKKRSPEELKQAIEALREKAKEKKEKERIL 66
Query: 279 EAHDAETQYNTVCKKITELTQKGQDIEQIHRTGLSALEVLKRERDEKSLQKNALQQDVS- 455
+ +T Y + K E Q + ++ R L L+ +++++ E + Q+ + ++
Sbjct: 67 ALEEKKTNYKILQKSNDETAQAMRKMQDQAR--LRDLQKIRQQKAEDAEQRKKILAEIER 124
Query: 456 TYESQAREAQSSLRTVQQT 512
+ +A E ++ +V++T
Sbjct: 125 DKKRRAAERENKNSSVKET 143
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 32.7 bits (71), Expect = 0.075
Identities = 28/130 (21%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Frame = +3
Query: 135 SKLRKSSEKEYHSLRASYDQMRS-YEEFEQQIQQL--QNEYYWREVVEVETEAHDAETQY 305
SKL S E+E SL+ S D+ ++ ++ ++Q+ Q E + + + ++
Sbjct: 392 SKL-SSFEQENKSLKGSIDEYQNNLSSKDKMVKQVSSQLEEARSSLAHATGKLAEINSER 450
Query: 306 NTVCKKITELTQKGQDIEQIHRTGLSALEVLKRERDEKSLQKNALQQDVSTYESQAREAQ 485
+ KKI + + QD+ + + L+ D+K + N L++ + + + Q
Sbjct: 451 DFQNKKIKDFEKIEQDLRACLNSSSNELKEKSALIDKKDQELNNLREQIKEQKKVSESTQ 510
Query: 486 SSLRTVQQTV 515
SSL+++Q+ +
Sbjct: 511 SSLQSLQRDI 520
Score = 30.3 bits (65), Expect = 0.40
Identities = 29/138 (21%), Positives = 62/138 (44%), Gaps = 4/138 (2%)
Frame = +3
Query: 123 KNETSKLRKSSEKEYHSLRASY-DQMRSYEEFEQQIQQLQNEYYWREVVEVETEAHDAET 299
K+E LRK S+K+ H L A++ D ++ + +Q+ +NE +V +E + E
Sbjct: 1115 KDELLALRKKSKKQ-HDLCANFVDDLKEKSDALEQLTNEKNEL----IVSLEQSNSNNEA 1169
Query: 300 ---QYNTVCKKITELTQKGQDIEQIHRTGLSALEVLKRERDEKSLQKNALQQDVSTYESQ 470
+ + + +++++ + D + + S L + E D K++L S
Sbjct: 1170 LVEERSDLANRLSDMKKSLSDSDNVISVIRSDLVRVNDELDTLKKDKDSLSTQYSEVCQD 1229
Query: 471 AREAQSSLRTVQQTVQKY 524
+ SL+ +++ KY
Sbjct: 1230 RDDLLDSLKGCEESFNKY 1247
Score = 27.9 bits (59), Expect = 2.1
Identities = 23/106 (21%), Positives = 46/106 (43%)
Frame = +3
Query: 267 EVETEAHDAETQYNTVCKKITELTQKGQDIEQIHRTGLSALEVLKRERDEKSLQKNALQQ 446
++E E + + T+ ++T+ K EQ +++ LK DE ++ +
Sbjct: 368 QLEEEMVELKESNRTIHSQLTDAESKLSSFEQENKS-------LKGSIDEYQNNLSSKDK 420
Query: 447 DVSTYESQAREAQSSLRTVQQTVQKYQDRFDREXKKVLDLXEGDRE 584
V SQ EA+SSL + + D + KK+ D + +++
Sbjct: 421 MVKQVSSQLEEARSSLAHATGKLAEINSERDFQNKKIKDFEKIEQD 466
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.1 bits (67), Expect = 0.23
Identities = 18/59 (30%), Positives = 18/59 (30%)
Frame = +3
Query: 636 GLXGAPGXXPQNPXPPXPLXXXRAPPRRLXGTPXXPPXXQXXXXPPPXNLXPXPXXXXP 812
G A P P PP P R PP P PP P P P P P
Sbjct: 116 GKSSASAAPPSAPAPPTPQSELR-PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPP 173
Score = 27.1 bits (57), Expect = 3.7
Identities = 16/61 (26%), Positives = 20/61 (32%), Gaps = 1/61 (1%)
Frame = +1
Query: 634 PGSXAPPGXXXKT-PPXXXPXTXRXPRPXAXAEPLXPXRXXXXXFXPPPKTWXPXPXXXP 810
P + APP + PP P P P + P P + PP P P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSP 184
Query: 811 P 813
P
Sbjct: 185 P 185
Score = 26.2 bits (55), Expect = 6.5
Identities = 21/76 (27%), Positives = 24/76 (31%), Gaps = 5/76 (6%)
Frame = +1
Query: 601 PAPEXPXXNXNPGSXAPPGXXXKTP-PXXXP--XTXRXPRPXAXAEPLXPXRXXXXXFXP 771
PAP P P + APP P P P + P P + P P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSA 187
Query: 772 P--PKTWXPXPXXXPP 813
P P P P PP
Sbjct: 188 PSLPSAVPPMPPKVPP 203
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 30.7 bits (66), Expect = 0.30
Identities = 21/90 (23%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Frame = +3
Query: 204 YEEFEQQIQQL--QNEYYWREVVEVETEAHDAETQYNTVCKKITELTQKGQDIEQ-IHRT 374
++EFE++ + QN+ E + + H+ + N++ KK++++ + Q +E+ + R
Sbjct: 272 FKEFEEREKSAIKQNKEQSSEGSKTANQTHEQKELINSLEKKVSDIALEKQLLEEAVERY 331
Query: 375 GLSALEVLKRERDEKSLQKNALQQDVSTYE 464
L+ +E + +R K L+ +Q S E
Sbjct: 332 KLAMVEFAECQRRLKELEAMHFEQPGSVTE 361
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 30.3 bits (65), Expect = 0.40
Identities = 22/137 (16%), Positives = 61/137 (44%)
Frame = +3
Query: 108 QV*TFKNETSKLRKSSEKEYHSLRASYDQMRSYEEFEQQIQQLQNEYYWREVVEVETEAH 287
Q+ +NE S L + + + +L + ++ + F +++ E +E + ++
Sbjct: 148 QIEALQNENSHLGEQVQSAHQAL-SDIEERKKQHMFASSSSRVKEEILVQEKSALVSDLA 206
Query: 288 DAETQYNTVCKKITELTQKGQDIEQIHRTGLSALEVLKRERDEKSLQKNALQQDVSTYES 467
++ ++ VC+K+ +++ QD+E+ GL+ E+ + QK +
Sbjct: 207 SLQSDHSKVCEKLEVSSRQVQDLEK-KLAGLAQQNTELNEKIQLFEQKRSNYSSDGNISK 265
Query: 468 QAREAQSSLRTVQQTVQ 518
+S++ +++ V+
Sbjct: 266 ILETDPTSIKELEEEVE 282
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 30.3 bits (65), Expect = 0.40
Identities = 29/149 (19%), Positives = 63/149 (42%), Gaps = 6/149 (4%)
Frame = +3
Query: 144 RKSSEKEYHSLRASYDQMRSYEEFEQQIQQ-LQNEYYWREVVEVETEAHDAETQYNTVCK 320
++ E+E +LR D+ + E E + + + E + +E + D E + + +
Sbjct: 140 KEKLEREVENLRKELDKYKDLVETEAEKRAAITKEECEKSWLEQQKLYKDMEQENASTIQ 199
Query: 321 KITELTQKGQDIEQIHRTGLSALEVLKRERDEKSLQKNALQQDVSTYESQAREAQSSLRT 500
K+T ++ Q + H S E + + KS + NA+ ++ E Q+ +
Sbjct: 200 KLTSKIRELQASQLDHDLQASQNESAGLDVNAKSAEVNAILSELDDANKIIVELQAEIAV 259
Query: 501 VQQTVQKY-----QDRFDREXKKVLDLXE 572
++Q ++ QD + K+ LD +
Sbjct: 260 LKQNTKEQKSGSSQDDLSNQQKQQLDFMD 288
>SPAC1687.18c |ssl3||cohesin loading factor Ssl3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 559
Score = 30.3 bits (65), Expect = 0.40
Identities = 15/52 (28%), Positives = 31/52 (59%)
Frame = +3
Query: 261 VVEVETEAHDAETQYNTVCKKITELTQKGQDIEQIHRTGLSALEVLKRERDE 416
V++ +E + + QY + +TEL+++ +E + +SALE+ K+ +DE
Sbjct: 468 VIQQSSEYANTQLQYIS----LTELSERFGKLEHAEKMAISALELAKKSKDE 515
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.9 bits (64), Expect = 0.53
Identities = 20/68 (29%), Positives = 21/68 (30%), Gaps = 2/68 (2%)
Frame = +1
Query: 601 PAPEXPXXNXNPGSXAPPGXXXKT--PPXXXPXTXRXPRPXAXAEPLXPXRXXXXXFXPP 774
PAP P APP + PP P P P P P PP
Sbjct: 1153 PAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPP 1212
Query: 775 PKTWXPXP 798
P T P P
Sbjct: 1213 PSTAPPVP 1220
>SPBC13G1.03c |pex14||peroxisomal membrane anchor
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 286
Score = 29.5 bits (63), Expect = 0.70
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Frame = +3
Query: 279 EAHDAETQYNTVCKKITELTQKGQDIEQIHRTGL-SALEVLKRERDEKSLQKNALQQDVS 455
EAH + +K++E T+K QD I L L LKR + + + + QDV
Sbjct: 119 EAHKILENLDEQTRKLSERTEKQQDELDIALDDLEETLNTLKRTSENRDREIARISQDV- 177
Query: 456 TYESQAREAQSSLRTVQQTVQKYQDRFDRE 545
Y SL ++++ ++ RE
Sbjct: 178 -YTMSTITLPQSLEQIKKSQEEALQNLSRE 206
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 29.5 bits (63), Expect = 0.70
Identities = 27/121 (22%), Positives = 59/121 (48%), Gaps = 1/121 (0%)
Frame = +3
Query: 135 SKLRKSSEKEYHSLRASYDQMRSYEEFEQQIQQLQNEYYWREVVEVETEAHDAETQYNTV 314
SK+ + ++ + R + +S EE+EQQ+ +++ +E+++ T N +
Sbjct: 237 SKVEELDQEITETARLQDELFKSTEEYEQQMITIRH---------LESQSDIINTTINDL 287
Query: 315 CKKITELTQKGQDIEQIHRTGLSALEVLKRERD-EKSLQKNALQQDVSTYESQAREAQSS 491
++T + +D+E++H + E +K E++ KSL+K + D+ + RE
Sbjct: 288 KSQMTITDESSEDLEKLHS---NFAEKVKEEQELYKSLEKK--RSDLESLLKSRRELLEK 342
Query: 492 L 494
L
Sbjct: 343 L 343
>SPBC13E7.06 |msd1|mug172|spindle pole body protein
Msd1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 331
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/63 (22%), Positives = 30/63 (47%)
Frame = +3
Query: 396 LKRERDEKSLQKNALQQDVSTYESQAREAQSSLRTVQQTVQKYQDRFDREXKKVLDLXEG 575
L R DE+ L+K +L + E + + ++++ ++ ++ YQ+ + KV L
Sbjct: 54 LLRATDEERLEKESLLDAIKNNEYEKQRDNNTIKRLKNELELYQNECQLQLNKVRTLERD 113
Query: 576 DRE 584
E
Sbjct: 114 QAE 116
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 28.7 bits (61), Expect = 1.2
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = -2
Query: 786 PGFXGGGKXRXGXXXGXKGFRXGXGAGXAXXXGAXXGXGFXGXPRGRLXAR 634
PG GG G G G R G G G G G G G GR AR
Sbjct: 5 PGSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRG-GARGGRGGRGGAR 54
>SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 817
Score = 28.7 bits (61), Expect = 1.2
Identities = 32/152 (21%), Positives = 67/152 (44%), Gaps = 2/152 (1%)
Frame = +3
Query: 129 ETSKLRKSSEKEYHSLRASY-DQMRSYEE-FEQQIQQLQNEYYWREVVEVETEAHDAETQ 302
E + E++ +SL Y ++++S EE F +I++L +E + + ++ E +
Sbjct: 277 ELQDFASNIEQKANSLIMEYKNELQSAEEHFSHKIKELTSENELK-ISRLQEEKDSLLKK 335
Query: 303 YNTVCKKITELTQKGQDIEQIHRTGLSALEVLKRERDEKSLQKNALQQDVSTYESQAREA 482
+ Q D+E+ + SA++ L+ E + Q LQ+++++
Sbjct: 336 VQEGASLAMQRVQNKHDLEK--KRLQSAIQPLQEENNSLKQQIEQLQRELASETVVKENL 393
Query: 483 QSSLRTVQQTVQKYQDRFDREXKKVLDLXEGD 578
+SSL VQK + +R + + E D
Sbjct: 394 KSSLDQQSANVQKLEST-NRALESTIKTLEED 424
>SPCC285.14 |||TRAPP complex subunit Trs130 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1150
Score = 27.5 bits (58), Expect = 2.8
Identities = 26/109 (23%), Positives = 42/109 (38%), Gaps = 2/109 (1%)
Frame = +3
Query: 252 WREVVEVETEAHDAETQYNTVCKKITELTQKGQDIEQIHRTGLSALEVLKRERDEKSLQK 431
WRE E HD N K ++ + + +R AL + K ++ S
Sbjct: 418 WREPSFPLIEHHDNSLLDNRFQKLSETISSTSSFLSEYYRLSSEALSIFKAYKNRYSFVN 477
Query: 432 NALQQDVSTYESQARE-AQSSLRTVQ-QTVQKYQDRFDREXKKVLDLXE 572
A ++ Y + E A +SL+ V QT ++ K +DL E
Sbjct: 478 TACDTGLAQYLLEDYENAYASLKNVDVQTAWSNDPLEEKWSKFYVDLLE 526
>SPAC16C9.06c |upf1||ATP-dependent RNA helicase
Upf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +3
Query: 357 EQIHRTGLSALEVLKRERD--EKSLQKNALQQDVSTYE 464
E+IHRTGL + V + R+ E S+ +L + + Y+
Sbjct: 460 EKIHRTGLRVVRVAAKSREDIESSVSFLSLHEQIKNYK 497
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 27.1 bits (57), Expect = 3.7
Identities = 33/150 (22%), Positives = 68/150 (45%), Gaps = 11/150 (7%)
Frame = +3
Query: 126 NETSKLRKSSEKEYHSLRASYDQMRSYEEFEQQIQQLQNEYYWREVVEVETEAHDAETQY 305
N+ SK+ + EKE++ + D EF +++ +N+Y V++E E + E Q
Sbjct: 787 NKGSKMAEL-EKEFNQYKHKLD------EFTPILEKSENDY---NGVKLECEQLEGELQN 836
Query: 306 NTVCKKITELTQKGQDIEQIHRTGLSALEV--LKRERDEKSLQK---------NALQQDV 452
+ L Q G+ + +T ++ LE+ + E + K L + + L +++
Sbjct: 837 HQ-----QSLVQ-GESTTSLIKTEIAELELSLVNEEHNRKKLTELIEIESAKFSGLNKEI 890
Query: 453 STYESQAREAQSSLRTVQQTVQKYQDRFDR 542
+ + + +S + + T+QK FDR
Sbjct: 891 DSLSTSMKTFESEINNGELTIQKLNHEFDR 920
>SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1055
Score = 27.1 bits (57), Expect = 3.7
Identities = 27/152 (17%), Positives = 63/152 (41%), Gaps = 7/152 (4%)
Frame = +3
Query: 147 KSSEKEYHSLRASYDQMRSYEEFEQQIQQLQNEYYWREVVEVETEAHDAETQYNTVCKKI 326
K+ ++E + D+ S +E+E+ + + + V + + HD E + +++
Sbjct: 120 KTPKREIARRQRDEDEWES-DEYEEVVDGSASHPIEEDSVSTDFQNHDYEKSSDPETERL 178
Query: 327 TELTQKGQDIEQIHRTGLSA-----LEVLKRERDEKSLQKNALQQDVSTYESQAREAQSS 491
+L ++ + E++ R L A +E + + L L D ++ A E +
Sbjct: 179 NDLREREEFEERLRRKDLEAATNEFVEDYSSKFSSEELALRKLADDPESWRKLASELRKK 238
Query: 492 LRT--VQQTVQKYQDRFDREXKKVLDLXEGDR 581
R ++ Q+ + RE + L G++
Sbjct: 239 SRQQYLKPRAQQQLEILRREIRDEEQLFAGEK 270
>SPBC2G5.05 |||transketolase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 685
Score = 27.1 bits (57), Expect = 3.7
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +3
Query: 108 QV*TFKNETSKLRKSSEKEYHSLRASYDQMRSYEEFEQQIQQL 236
+V + E + S+E+EY + ASY Q SY + Q++++
Sbjct: 297 EVYAYYKERVAIASSAEEEYKKMYASYKQ--SYPDLSNQLERI 337
>SPAC7D4.04 |taf1||Taz1 interacting factor 1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 926
Score = 27.1 bits (57), Expect = 3.7
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +3
Query: 150 SSEKEYHSLRASYDQMRSYEEFEQQIQQLQNEYYWREVVEVETEAHDAETQY 305
S + +Y D R+++EF ++ L + + VV V T+AH+ E ++
Sbjct: 763 SKDLQYLYWMDGEDADRNFQEFLNRMSSLDFDSFHNFVVSVLTQAHNHELRW 814
>SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1125
Score = 27.1 bits (57), Expect = 3.7
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 23/129 (17%)
Frame = +3
Query: 123 KNET-SKLRKSSEKEYHSLRASYDQMRS-YEEFEQQIQQLQ--NEYYWREVVEVETEAHD 290
+NE+ S+L KS ++ L YD++RS +EE +I LQ NE +++++ E D
Sbjct: 685 QNESASELLKSRNEK---LCVDYDKLRSVFEEDSSKILSLQKENENLQSQILQISEELVD 741
Query: 291 AET-----QYNT--VCKKITELTQKGQDIEQIHRTGLSALEV-----------LKRERDE 416
+ +Y + K+ E+ + + + SAL+V L+RERDE
Sbjct: 742 YRSRCEALEYGNYELETKLIEMHDRVEMQTNVIEASASALDVSNTAILSFEDSLRRERDE 801
Query: 417 KS-LQKNAL 440
KS LQ+ L
Sbjct: 802 KSTLQQKCL 810
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 26.6 bits (56), Expect = 4.9
Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = +3
Query: 654 GXXPQNPXPPXPLXXXRA-PPRRLXGTPXXPPXXQXXXXPPPXNLXPXP 797
G P +P P+ A PP+ TP PP PPP + P P
Sbjct: 1680 GMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPP----MSVPPPPSAPPMP 1724
>SPBC365.07c |||TATA element modulatory factor homolog
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 26.6 bits (56), Expect = 4.9
Identities = 23/124 (18%), Positives = 53/124 (42%), Gaps = 4/124 (3%)
Frame = +3
Query: 207 EEFEQQIQQLQNEYYWREVVEVETEAHDAETQYNTVCKKITELTQKG----QDIEQIHRT 374
E+ ++++++L E EVV + + TQY+ + +K QD+++++
Sbjct: 123 EDLQRKMEELTVESM--EVVRLTRQVETLSTQYSIQRSQWVREDEKKKKEIQDLKELYEK 180
Query: 375 GLSALEVLKRERDEKSLQKNALQQDVSTYESQAREAQSSLRTVQQTVQKYQDRFDREXKK 554
+ +RER+ Q + + + + + E +R+ Q ++ D +
Sbjct: 181 SEHGAKNWERERETFQNQVSQMSKQLDSLEKLCERKDEEIRSSQAFNMTLREENDTLAAQ 240
Query: 555 VLDL 566
LDL
Sbjct: 241 NLDL 244
>SPAPB1E7.03 |rpc82||DNA-directed RNA polymerase III complex subunit
Rpc82 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 591
Score = 26.6 bits (56), Expect = 4.9
Identities = 17/71 (23%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Frame = +3
Query: 297 TQYNTVCKKITELTQKGQDI----EQIHRTGLSALEVLKRERDEKSLQK-NALQQDVSTY 461
T Y T K+I + +KG+D+ +++++ S ++ L + + L+ NA + V
Sbjct: 76 TYYETQWKEIYNILRKGKDVYLISQKLNQEAASVVKYLSTQGRARVLEVFNAFDKKVDGS 135
Query: 462 ESQAREAQSSL 494
+ ++R Q +L
Sbjct: 136 DEESRMMQKNL 146
>SPAC1851.04c ||SPAC27D7.01c|guanyl-nucleotide exchange factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1052
Score = 26.6 bits (56), Expect = 4.9
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = -1
Query: 178 LRLWYSFSELFRSLLVSFLNV 116
L+LW SFSE+ S+L++ N+
Sbjct: 726 LKLWLSFSEILSSVLINTKNL 746
>SPAC26F1.09 |gyp51||GTPase activating protein Gyp51
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1031
Score = 26.6 bits (56), Expect = 4.9
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Frame = +1
Query: 298 HSTILFVRRSLSSHRRVKTLNKYIEQD*VLLKS*RE-----SEMKNRYKRM 435
+ T LFV+ + S + L++Y + +LLKS E EM+NR+K +
Sbjct: 854 YDTSLFVKTAFSFEIQPDVLDRYGNEYDILLKSEHELDSSLEEMRNRHKSL 904
>SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 776
Score = 26.6 bits (56), Expect = 4.9
Identities = 23/102 (22%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
Frame = +3
Query: 123 KNETSKLRKSSEKEYHSLRASYDQMRSYEEFEQQIQQLQNEYYWREVVEVETEAHDAETQ 302
++E + L + E+ H ++ + E+ + I+ +NE +E + + + A
Sbjct: 381 QSERTHLLRELEELRHLATSAKEDFVKVEKLNKIIKD-ENENL-KEYIRNNSLSFQATAG 438
Query: 303 YNTVCKKITELTQKGQDIEQIHRTGL--SALEVLKRERDEKS 422
T CK++ + G D E H TG + LE++ +E + K+
Sbjct: 439 ELTQCKQLPQPRITGNDQENSHYTGAGNNCLELVGKENNCKN 480
>SPAC8C9.07 |||rRNA processing protein Fyv7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 144
Score = 26.6 bits (56), Expect = 4.9
Identities = 19/76 (25%), Positives = 36/76 (47%)
Frame = +3
Query: 129 ETSKLRKSSEKEYHSLRASYDQMRSYEEFEQQIQQLQNEYYWREVVEVETEAHDAETQYN 308
E K K S ++ ++ E +++IQQ + + ++ +E+E + D E N
Sbjct: 57 EYIKKGSGERKRKFSKKSHLQELYERSEEKRRIQQEKEDAKVQKRLEIEKKQKDREQTRN 116
Query: 309 TVCKKITELTQKGQDI 356
+ KK T++GQ I
Sbjct: 117 MLSKK----TKRGQPI 128
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 26.6 bits (56), Expect = 4.9
Identities = 30/140 (21%), Positives = 56/140 (40%), Gaps = 1/140 (0%)
Frame = +3
Query: 123 KNETSKLRKSSEKEYHSLRASYDQMRSYEEFEQQIQQLQNEYYWREVVEVETEAHDAETQ 302
+ E + L K + Y S AS S E E ++ + + +E+ E + H A Q
Sbjct: 1031 REENASL-KDQCRTYESQLASLVSKYSETESELNKKEAELVIFQKEITEYRDQLHKA-FQ 1088
Query: 303 YNTVCKKITELTQKGQDI-EQIHRTGLSALEVLKRERDEKSLQKNALQQDVSTYESQARE 479
I ++ + E I+ T + L +LK ++ KSL Q + +
Sbjct: 1089 NPEKTHNINDVKSGPLNSDENIYSTSSTTLSILKDVQELKSLHTKEANQLSERIKEISEM 1148
Query: 480 AQSSLRTVQQTVQKYQDRFD 539
+ S+ T ++ +K + D
Sbjct: 1149 LEQSIATEEKLRRKNSELCD 1168
>SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1052
Score = 26.2 bits (55), Expect = 6.5
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 174 LRASYDQMRSYEEFEQQIQQLQNEYYWREVVE 269
L Y Q +S + E IQQL+NE +++E
Sbjct: 436 LSEKYQQQQSLLQLESNIQQLENEKKAAKLIE 467
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 26.2 bits (55), Expect = 6.5
Identities = 20/79 (25%), Positives = 24/79 (30%)
Frame = +1
Query: 580 GNIXSGRPAPEXPXXNXNPGSXAPPGXXXKTPPXXXPXTXRXPRPXAXAEPLXPXRXXXX 759
G+ S P P P + GS P PP P + P PL R
Sbjct: 330 GSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRS--APSTGRQPPPLSSSRAVSN 387
Query: 760 XFXPPPKTWXPXPXXXPPV 816
PPP PP+
Sbjct: 388 PPAPPPAIPGRSAPALPPL 406
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 26.2 bits (55), Expect = 6.5
Identities = 29/147 (19%), Positives = 61/147 (41%), Gaps = 10/147 (6%)
Frame = +3
Query: 123 KNETSKLRKSSEKEYHSLRASYDQMRSYEEFEQQIQQLQN--EYYWREVVEVETEAH--- 287
K+E + + +Y S +Q ++ + F ++I+ L+N E RE + TE
Sbjct: 217 KSEDKNFKLEEKVDYLSKVNDVEQSQNVKVFTERIRFLENALEKVQREKDSLSTEMEEDK 276
Query: 288 -----DAETQYNTVCKKITELTQKGQDIEQIHRTGLSALEVLKRERDEKSLQKNALQQDV 452
D E + + ++ EL+++ + + + LKR+ +EK +A + +
Sbjct: 277 SNKEVDYEYEIRQLQNRLDELSEELDVAQDLLTEKEDEIATLKRQIEEKENSSSAFENEE 336
Query: 453 STYESQAREAQSSLRTVQQTVQKYQDR 533
+ S Q +Q ++ DR
Sbjct: 337 N---SSYVHLQEDYAILQAKCDEFADR 360
>SPAC13A11.01c |rga8|SPAC2F7.18c|GTPase activating protein Rga8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 777
Score = 25.8 bits (54), Expect = 8.6
Identities = 15/62 (24%), Positives = 33/62 (53%)
Frame = +3
Query: 153 SEKEYHSLRASYDQMRSYEEFEQQIQQLQNEYYWREVVEVETEAHDAETQYNTVCKKITE 332
S+K S + +Q++SYE+ +++ ++ YY + +E +++ T + IT+
Sbjct: 116 SQKLQTSQQVLTNQIKSYEKKYYTLKKTKSAYY-NKCRNLEDYEEESKESNETTSEAITD 174
Query: 333 LT 338
LT
Sbjct: 175 LT 176
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 25.8 bits (54), Expect = 8.6
Identities = 9/29 (31%), Positives = 21/29 (72%)
Frame = +3
Query: 189 DQMRSYEEFEQQIQQLQNEYYWREVVEVE 275
+++R YEE+ ++ ++LQ E + + VE++
Sbjct: 453 EEVRQYEEYRKKQKELQEELEFPDEVELQ 481
>SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 801
Score = 25.8 bits (54), Expect = 8.6
Identities = 32/145 (22%), Positives = 59/145 (40%)
Frame = +3
Query: 24 RLIWESLNDLPWXRXDKYKXNIENM**WQV*TFKNETSKLRKSSEKEYHSLRASYDQMRS 203
R +WESLN W + D + + + + TF +E +L S ++E+ + R
Sbjct: 345 RALWESLNQQRWLKIDDEQRD------YVMETF-HEDEELEDSEDEEFARQQL---LSRK 394
Query: 204 YEEFEQQIQQLQNEYYWREVVEVETEAHDAETQYNTVCKKITELTQKGQDIEQIHRTGLS 383
EE E+ + E + + + E + D K+ L G ++ + +
Sbjct: 395 EEEEEEDEEASDFEDSFADFSDGEADDLDESRWRKEAAKEHNSLLAVGYKNDRSYVVRNN 454
Query: 384 ALEVLKRERDEKSLQKNALQQDVST 458
+ V K DEK L+ ++ST
Sbjct: 455 KIGVFKHV-DEKGLKFQTALNNLST 478
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,662,629
Number of Sequences: 5004
Number of extensions: 48944
Number of successful extensions: 296
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 286
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 466510270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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