Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_J23
(948 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 42 6e-04
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 42 6e-04
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 42 6e-04
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 38 0.010
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 38 0.010
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 38 0.010
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 33 0.30
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.52
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.52
Z95559-8|CAB54437.1| 720|Caenorhabditis elegans Hypothetical pr... 32 0.69
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 31 0.91
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 31 0.91
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 31 0.91
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.2
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 1.2
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 1.2
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.2
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 25 2.6
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 25 2.6
Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical pr... 30 2.8
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 4.9
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 4.9
Z78415-7|CAH60759.1| 844|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 28 8.5
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 41.9 bits (94), Expect = 6e-04
Identities = 32/103 (31%), Positives = 35/103 (33%)
Frame = +2
Query: 515 PPPKXPXPXVLGGGXGFXXXPXGGXXFSXKXGGXPRXKXFXXKGPKKGXKPXKXGRXGGF 694
PPP P + GG P GG GG P P G P GG
Sbjct: 713 PPPPPGLPPITGGPP--PPPPPGG--LPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGC 768
Query: 695 XPKGXPPPXXXXKKNSPPPX*XGGXTPPGXIIKKXXGFXPPKK 823
P PPP K PPP G P +I + PPKK
Sbjct: 769 PPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVI---PDYLPPKK 808
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 467 PPPXXXGVFFXGPXXPPPP 523
PPP G F GP PPPP
Sbjct: 772 PPPPPPGGFKGGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 41.9 bits (94), Expect = 6e-04
Identities = 32/103 (31%), Positives = 35/103 (33%)
Frame = +2
Query: 515 PPPKXPXPXVLGGGXGFXXXPXGGXXFSXKXGGXPRXKXFXXKGPKKGXKPXKXGRXGGF 694
PPP P + GG P GG GG P P G P GG
Sbjct: 713 PPPPPGLPPITGGPP--PPPPPGG--LPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGC 768
Query: 695 XPKGXPPPXXXXKKNSPPPX*XGGXTPPGXIIKKXXGFXPPKK 823
P PPP K PPP G P +I + PPKK
Sbjct: 769 PPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVI---PDYLPPKK 808
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 467 PPPXXXGVFFXGPXXPPPP 523
PPP G F GP PPPP
Sbjct: 772 PPPPPPGGFKGGPPPPPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 41.9 bits (94), Expect = 6e-04
Identities = 32/103 (31%), Positives = 35/103 (33%)
Frame = +2
Query: 515 PPPKXPXPXVLGGGXGFXXXPXGGXXFSXKXGGXPRXKXFXXKGPKKGXKPXKXGRXGGF 694
PPP P + GG P GG GG P P G P GG
Sbjct: 296 PPPPPGLPPITGGPP--PPPPPGG--LPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGC 351
Query: 695 XPKGXPPPXXXXKKNSPPPX*XGGXTPPGXIIKKXXGFXPPKK 823
P PPP K PPP G P +I + PPKK
Sbjct: 352 PPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVI---PDYLPPKK 391
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 467 PPPXXXGVFFXGPXXPPPP 523
PPP G F GP PPPP
Sbjct: 355 PPPPPPGGFKGGPPPPPPP 373
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 37.9 bits (84), Expect = 0.010
Identities = 32/113 (28%), Positives = 36/113 (31%)
Frame = +2
Query: 500 GPXXPPPPKXPXPXVLGGGXGFXXXPXGGXXFSXKXGGXPRXKXFXXKGPKKGXKPXKXG 679
G PPPP P + G G P G + G P P G P
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSP-PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP- 292
Query: 680 RXGGFXPKGXPPPXXXXKKNSPPPX*XGGXTPPGXIIKKXXGFXPPKKKXXXP 838
R G P PPP S PP GG PP PP++K P
Sbjct: 293 RAGS--PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP---PPPRQKRQAP 340
Score = 29.5 bits (63), Expect = 3.7
Identities = 23/90 (25%), Positives = 28/90 (31%)
Frame = +2
Query: 512 PPPPKXPXPXVLGGGXGFXXXPXGGXXFSXKXGGXPRXKXFXXKGPKKGXKPXKXGRXGG 691
PPPP+ P G P GG + G P P P + G
Sbjct: 264 PPPPRTGSPPPPPTGSP-PPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP 322
Query: 692 FXPKGXPPPXXXXKKNSPPPX*XGGXTPPG 781
G PPP K+ +P G P G
Sbjct: 323 PAGTGSPPPPPRQKRQAPERSPPTGSPPTG 352
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 37.9 bits (84), Expect = 0.010
Identities = 32/113 (28%), Positives = 36/113 (31%)
Frame = +2
Query: 500 GPXXPPPPKXPXPXVLGGGXGFXXXPXGGXXFSXKXGGXPRXKXFXXKGPKKGXKPXKXG 679
G PPPP P + G G P G + G P P G P
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSP-PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP- 313
Query: 680 RXGGFXPKGXPPPXXXXKKNSPPPX*XGGXTPPGXIIKKXXGFXPPKKKXXXP 838
R G P PPP S PP GG PP PP++K P
Sbjct: 314 RAGS--PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP---PPPRQKRQAP 361
Score = 29.5 bits (63), Expect = 3.7
Identities = 23/90 (25%), Positives = 28/90 (31%)
Frame = +2
Query: 512 PPPPKXPXPXVLGGGXGFXXXPXGGXXFSXKXGGXPRXKXFXXKGPKKGXKPXKXGRXGG 691
PPPP+ P G P GG + G P P P + G
Sbjct: 285 PPPPRTGSPPPPPTGSP-PPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP 343
Query: 692 FXPKGXPPPXXXXKKNSPPPX*XGGXTPPG 781
G PPP K+ +P G P G
Sbjct: 344 PAGTGSPPPPPRQKRQAPERSPPTGSPPTG 373
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 37.9 bits (84), Expect = 0.010
Identities = 32/113 (28%), Positives = 36/113 (31%)
Frame = +2
Query: 500 GPXXPPPPKXPXPXVLGGGXGFXXXPXGGXXFSXKXGGXPRXKXFXXKGPKKGXKPXKXG 679
G PPPP P + G G P G + G P P G P
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSP-PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP- 298
Query: 680 RXGGFXPKGXPPPXXXXKKNSPPPX*XGGXTPPGXIIKKXXGFXPPKKKXXXP 838
R G P PPP S PP GG PP PP++K P
Sbjct: 299 RAGS--PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP---PPPRQKRQAP 346
Score = 29.5 bits (63), Expect = 3.7
Identities = 23/90 (25%), Positives = 28/90 (31%)
Frame = +2
Query: 512 PPPPKXPXPXVLGGGXGFXXXPXGGXXFSXKXGGXPRXKXFXXKGPKKGXKPXKXGRXGG 691
PPPP+ P G P GG + G P P P + G
Sbjct: 270 PPPPRTGSPPPPPTGSP-PPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP 328
Query: 692 FXPKGXPPPXXXXKKNSPPPX*XGGXTPPG 781
G PPP K+ +P G P G
Sbjct: 329 PAGTGSPPPPPRQKRQAPERSPPTGSPPTG 358
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 33.1 bits (72), Expect = 0.30
Identities = 25/83 (30%), Positives = 27/83 (32%)
Frame = +2
Query: 470 PPXXXGVFFXGPXXPPPPKXPXPXVLGGGXGFXXXPXGGXXFSXKXGGXPRXKXFXXKGP 649
PP G G PPP P GG G+ P GG G P+ P
Sbjct: 380 PPPQSGP--PGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSY-GPPQGGPGGFGPP 436
Query: 650 KKGXKPXKXGRXGGFXPKGXPPP 718
G GF P G PPP
Sbjct: 437 PPGGPGAYGPPPTGFPPVGAPPP 459
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 32.3 bits (70), Expect = 0.52
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +2
Query: 503 PXXPPPPKXPXPXVLGGGXGFXXXPXGGXXFSXKXGG 613
P PPPP P P + G G+ GG S GG
Sbjct: 303 PPPPPPPPPPAPAPVSSGGGYSEQSSGGGGGSSYSGG 339
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 32.3 bits (70), Expect = 0.52
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +2
Query: 503 PXXPPPPKXPXPXVLGGGXGFXXXPXGGXXFSXKXGG 613
P PPPP P P + G G+ GG S GG
Sbjct: 303 PPPPPPPPPPAPAPVSSGGGYSEQSSGGGGGSSYSGG 339
>Z95559-8|CAB54437.1| 720|Caenorhabditis elegans Hypothetical
protein Y41E3.16 protein.
Length = 720
Score = 31.9 bits (69), Expect = 0.69
Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Frame = +2
Query: 485 GVFFXGPXXPPPPKXP----XPXVLGGGXGFXXXP 577
GVFF P PPP P P V+GGG G P
Sbjct: 489 GVFFNQPLPPPPAHPPKIGAHPLVMGGGGGVPMIP 523
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 31.5 bits (68), Expect = 0.91
Identities = 29/106 (27%), Positives = 31/106 (29%), Gaps = 4/106 (3%)
Frame = +2
Query: 512 PPPPKXPXPXVLGGGXGFXXXPXGGXXFSXKXGGXPRXKXFXXKGPKKGXKPXKXGRXGG 691
PPPP P G P G P F +G G P GR G
Sbjct: 707 PPPPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPPMFQ-QGFNAGAPPPPFGRGAG 765
Query: 692 FXPKGXPPPXXXXKKNSPPPX*XGG----XTPPGXIIKKXXGFXPP 817
PPP PPP GG PP + G PP
Sbjct: 766 PMSSFPPPPRGGMHHMPPPPSFRGGRGGHGGPPPPHFDRRGGGGPP 811
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 31.5 bits (68), Expect = 0.91
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +2
Query: 485 GVFFXGPXXPPPPKXPXPXVLGGGXGFXXXPXGG 586
G + P PPPP P P +GGG G+ P GG
Sbjct: 54 GSYAAAPALPPPPPPP-PAPIGGGAGY-AAPFGG 85
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 31.5 bits (68), Expect = 0.91
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +2
Query: 485 GVFFXGPXXPPPPKXPXPXVLGGGXGFXXXPXGG 586
G + P PPPP P P +GGG G+ P GG
Sbjct: 54 GSYAAAPALPPPPPPP-PAPIGGGAGY-AAPFGG 85
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.1 bits (67), Expect = 1.2
Identities = 28/104 (26%), Positives = 32/104 (30%)
Frame = +2
Query: 467 PPPXXXGVFFXGPXXPPPPKXPXPXVLGGGXGFXXXPXGGXXFSXKXGGXPRXKXFXXKG 646
PPP + P PPP + P P G G P GG P +
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRTPGPP---GMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRY 343
Query: 647 PKKGXKPXKXGRXGGFXPKGXPPPXXXXKKNSPPPX*XGGXTPP 778
P G P R P PPP + PP G PP
Sbjct: 344 P-GGMPPPPPPRYPSAGPGMYPPP--PPSRPPAPPSGHGMIPPP 384
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +2
Query: 467 PPPXXXGVFFXGPXXPPPPKXPXPXVLGG 553
PPP G+ G PPPP P P GG
Sbjct: 634 PPPPPMGLPAVGAGAPPPPPPPPPSGAGG 662
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +2
Query: 467 PPPXXXGVFFXGPXXPPPPKXPXPXVLGG 553
PPP G+ G PPPP P P GG
Sbjct: 460 PPPPPMGLPAVGAGAPPPPPPPPPSGAGG 488
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.1 bits (67), Expect = 1.2
Identities = 28/104 (26%), Positives = 32/104 (30%)
Frame = +2
Query: 467 PPPXXXGVFFXGPXXPPPPKXPXPXVLGGGXGFXXXPXGGXXFSXKXGGXPRXKXFXXKG 646
PPP + P PPP + P P G G P GG P +
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRTPGPP---GMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRY 353
Query: 647 PKKGXKPXKXGRXGGFXPKGXPPPXXXXKKNSPPPX*XGGXTPP 778
P G P R P PPP + PP G PP
Sbjct: 354 P-GGMPPPPPPRYPSAGPGMYPPP--PPSRPPAPPSGHGMIPPP 394
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 25.0 bits (52), Expect(2) = 2.6
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 3/38 (7%)
Frame = +2
Query: 644 GPKKGXKPXKXG---RXGGFXPKGXPPPXXXXKKNSPP 748
GP +G P R G + P PPP + +SPP
Sbjct: 330 GPPRGFMPPPHPMMFRGGPYPPFFPPPPPHFMRPSSPP 367
Score = 23.4 bits (48), Expect(2) = 2.6
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +2
Query: 467 PPPXXXGVFFXGPXXPPPP 523
PPP G P PPPP
Sbjct: 307 PPPHFMGRGMPPPFMPPPP 325
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 25.0 bits (52), Expect(2) = 2.6
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 3/38 (7%)
Frame = +2
Query: 644 GPKKGXKPXKXG---RXGGFXPKGXPPPXXXXKKNSPP 748
GP +G P R G + P PPP + +SPP
Sbjct: 330 GPPRGFMPPPHPMMFRGGPYPPFFPPPPPHFMRPSSPP 367
Score = 23.4 bits (48), Expect(2) = 2.6
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +2
Query: 467 PPPXXXGVFFXGPXXPPPP 523
PPP G P PPPP
Sbjct: 307 PPPHFMGRGMPPPFMPPPP 325
>Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical
protein F15B9.10 protein.
Length = 373
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = -3
Query: 574 GGXKPXPPPQNXGXGXFWGGRGXGAXKKNPXXXGGG 467
GG P PPPQ G GG G G +N GGG
Sbjct: 268 GGGYPQPPPQQGG-----GGGGAGGMFRNILSSGGG 298
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = -3
Query: 619 GXSPXFXGKXXSPXWGGXKPXPPPQNXGXGXFWGGRGXGAXKKNPXXXGGG 467
G P + WGG + N G G WGG G G GGG
Sbjct: 50 GGGPGWGRGGGGSGWGGGRGGGWGNNGGGGN-WGGNGGGGNGGGGRGGGGG 99
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/59 (32%), Positives = 23/59 (38%)
Frame = +2
Query: 641 KGPKKGXKPXKXGRXGGFXPKGXPPPXXXXKKNSPPPX*XGGXTPPGXIIKKXXGFXPP 817
+GP G P G G+ +G PPP PP GG PP + G PP
Sbjct: 1552 RGPPMGGLPPPHGGMNGW--RGGPPPPRGGSHCQGPPPLMGG--PPPRLGMPPPGPPPP 1606
>Z78415-7|CAH60759.1| 844|Caenorhabditis elegans Hypothetical
protein C17G1.4b protein.
Length = 844
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +2
Query: 665 PXKXGRXGGFXPKGXPPPXXXXKKNSPPPX*XGGXTPP 778
P + R GG P+ PPP + PP GG P
Sbjct: 103 PPQNQRSGGQAPQNGPPPNYNSHQQMPPNNQYGGVPDP 140
>Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical
protein C17G1.4a protein.
Length = 925
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +2
Query: 665 PXKXGRXGGFXPKGXPPPXXXXKKNSPPPX*XGGXTPP 778
P + R GG P+ PPP + PP GG P
Sbjct: 103 PPQNQRSGGQAPQNGPPPNYNSHQQMPPNNQYGGVPDP 140
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -3
Query: 574 GGXKPXPPPQNXGXGXFWGGRGXGAXKKNPXXXGG 470
GG P PPP G G GG G G GG
Sbjct: 50 GGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGG 84
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,059,118
Number of Sequences: 27780
Number of extensions: 187344
Number of successful extensions: 805
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 641
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2454664212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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