Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_J20
         (943 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122174-1|AAM52686.1|  877|Drosophila melanogaster LD34142p pro...    35   0.19 
AE014296-2433|AAF49702.1| 2061|Drosophila melanogaster CG9425-PA...    35   0.19 
AE014296-2432|AAS65008.1| 2103|Drosophila melanogaster CG9425-PB...    35   0.19 
AE014296-390|AAF47594.1|  553|Drosophila melanogaster CG12361-PA...    29   7.0  

>AY122174-1|AAM52686.1|  877|Drosophila melanogaster LD34142p
           protein.
          Length = 877

 Score = 34.7 bits (76), Expect = 0.19
 Identities = 20/54 (37%), Positives = 21/54 (38%)
 Frame = +1

Query: 406 GGXGGXFFXXKXPPPPXKXGXXXGXXXRXPPXKTXXPXXXXXGXGXPPPKGVXP 567
           GG GG     + PPPP       G     PP  T  P     G G PPP G  P
Sbjct: 158 GGGGGGHMGMRGPPPPAPH--LRGMPPGGPPP-TQQPGGAGGGGGPPPPYGQYP 208


>AE014296-2433|AAF49702.1| 2061|Drosophila melanogaster CG9425-PA,
            isoform A protein.
          Length = 2061

 Score = 34.7 bits (76), Expect = 0.19
 Identities = 20/54 (37%), Positives = 21/54 (38%)
 Frame = +1

Query: 406  GGXGGXFFXXKXPPPPXKXGXXXGXXXRXPPXKTXXPXXXXXGXGXPPPKGVXP 567
            GG GG     + PPPP       G     PP  T  P     G G PPP G  P
Sbjct: 1342 GGGGGGHMGMRGPPPPAPH--LRGMPPGGPPP-TQQPGGAGGGGGPPPPYGQYP 1392


>AE014296-2432|AAS65008.1| 2103|Drosophila melanogaster CG9425-PB,
            isoform B protein.
          Length = 2103

 Score = 34.7 bits (76), Expect = 0.19
 Identities = 20/54 (37%), Positives = 21/54 (38%)
 Frame = +1

Query: 406  GGXGGXFFXXKXPPPPXKXGXXXGXXXRXPPXKTXXPXXXXXGXGXPPPKGVXP 567
            GG GG     + PPPP       G     PP  T  P     G G PPP G  P
Sbjct: 1384 GGGGGGHMGMRGPPPPAPH--LRGMPPGGPPP-TQQPGGAGGGGGPPPPYGQYP 1434


>AE014296-390|AAF47594.1|  553|Drosophila melanogaster CG12361-PA
           protein.
          Length = 553

 Score = 29.5 bits (63), Expect = 7.0
 Identities = 13/34 (38%), Positives = 13/34 (38%)
 Frame = -2

Query: 453 GGXGXFXXKKXPPXPPPXPXXXKXTXXXAXPFFP 352
           GG G       PP PPP P   K       PF P
Sbjct: 165 GGGGHGHGHPTPPPPPPPPVIAKPMPSRPTPFLP 198


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.314    0.146    0.496 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,033,450
Number of Sequences: 53049
Number of extensions: 245893
Number of successful extensions: 425
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 282
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 394
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4669258284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)