Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_J19
         (865 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X51593-1|CAA35942.1| 1085|Homo sapiens embryonic myosin heavy ch...    33   1.0  
X15696-1|CAA33731.1| 1085|Homo sapiens protein ( Human muscle mR...    33   1.8  
X13988-1|CAA32167.1| 1940|Homo sapiens protein ( Human mRNA for ...    33   1.8  
X13100-1|CAA31492.1| 1167|Homo sapiens myosin heavy chain (1167 ...    33   1.8  
AY517555-1|AAT44528.1|  941|Homo sapiens hypothetical rhabdomyos...    33   1.8  

>X51593-1|CAA35942.1| 1085|Homo sapiens embryonic myosin heavy chain
           (1085 AA) protein.
          Length = 1085

 Score = 33.5 bits (73), Expect = 1.0
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
 Frame = +3

Query: 177 VMDADSEIEKKKIDAVQTIETIQSMIDVSAERL-EGLRTQCSTSAELTQQEIR 332
           + + D EIE+ K +  +T+ET+QS +D    R  E +R +     +L + EI+
Sbjct: 722 IAEKDEEIEQLKRNYQRTVETMQSALDAEVRRANEAIRLKKKMEGDLNEIEIQ 774


>X15696-1|CAA33731.1| 1085|Homo sapiens protein ( Human muscle mRNA
           for embryonic myosin heavy chain (SMHCE). ).
          Length = 1085

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
 Frame = +3

Query: 177 VMDADSEIEKKKIDAVQTIETIQSMIDVSA-ERLEGLRTQCSTSAELTQQEIR 332
           + + D EIE+ K +  +T+ET+QS +D     R E +R +     +L + EI+
Sbjct: 722 IAEKDEEIEQLKRNYQRTVETMQSALDAEVRSRNEAIRLKKKMEGDLNEIEIQ 774


>X13988-1|CAA32167.1| 1940|Homo sapiens protein ( Human mRNA for
            embryonic myosin heavy chain. ).
          Length = 1940

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
 Frame = +3

Query: 177  VMDADSEIEKKKIDAVQTIETIQSMIDVSA-ERLEGLRTQCSTSAELTQQEIR 332
            + + D EIE+ K +  +T+ET+QS +D     R E +R +     +L + EI+
Sbjct: 1577 IAEKDEEIEQLKRNYQRTVETMQSALDAEVRSRNEAIRLKKKMEGDLNEIEIQ 1629


>X13100-1|CAA31492.1| 1167|Homo sapiens myosin heavy chain (1167 AA)
           protein.
          Length = 1167

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
 Frame = +3

Query: 177 VMDADSEIEKKKIDAVQTIETIQSMIDVSA-ERLEGLRTQCSTSAELTQQEIR 332
           + + D EIE+ K +  +T+ET+QS +D     R E +R +     +L + EI+
Sbjct: 804 IAEKDEEIEQLKRNYQRTVETMQSALDAEVRSRNEAIRLKKKMEGDLNEIEIQ 856


>AY517555-1|AAT44528.1|  941|Homo sapiens hypothetical
           rhabdomyosarcoma antigen MU-RMS-40.3 protein.
          Length = 941

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
 Frame = +3

Query: 177 VMDADSEIEKKKIDAVQTIETIQSMIDVSA-ERLEGLRTQCSTSAELTQQEIR 332
           + + D EIE+ K +  +T+ET+QS +D     R E +R +     +L + EI+
Sbjct: 578 IAEKDEEIEQLKRNYQRTVETMQSALDAEVRSRNEAIRLKKKMEGDLNEIEIQ 630


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,547,058
Number of Sequences: 237096
Number of extensions: 2070027
Number of successful extensions: 4659
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4659
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11039988564
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)