Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_J18
(897 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003141-3|AAK21484.1| 135|Caenorhabditis elegans Lipid binding... 52 6e-07
Z81127-2|CAB03387.1| 137|Caenorhabditis elegans Hypothetical pr... 49 4e-06
AF003141-5|AAK21486.1| 136|Caenorhabditis elegans Lipid binding... 48 1e-05
Z81127-7|CAB03391.2| 137|Caenorhabditis elegans Hypothetical pr... 47 2e-05
AC024771-9|ABA61863.1| 137|Caenorhabditis elegans Lipid binding... 46 4e-05
AC024771-8|AAK70656.1| 152|Caenorhabditis elegans Lipid binding... 46 4e-05
U88184-10|AAK31514.2| 728|Caenorhabditis elegans Hypothetical p... 31 0.85
U88184-9|ABC71833.1| 843|Caenorhabditis elegans Hypothetical pr... 31 0.85
U64855-7|AAB04984.1| 145|Caenorhabditis elegans Lipid binding p... 31 1.1
U40420-6|ABD63223.1| 150|Caenorhabditis elegans Lipid binding p... 29 3.4
U40420-5|AAA81433.2| 165|Caenorhabditis elegans Lipid binding p... 29 3.4
AF022973-3|AAC25799.1| 551|Caenorhabditis elegans Asparaginyl t... 29 4.5
U40420-8|AAA81435.1| 161|Caenorhabditis elegans Lipid binding p... 29 6.0
U40420-7|AAA81434.1| 159|Caenorhabditis elegans Lipid binding p... 29 6.0
>AF003141-3|AAK21484.1| 135|Caenorhabditis elegans Lipid binding
protein protein 6 protein.
Length = 135
Score = 52.0 bits (119), Expect = 6e-07
Identities = 25/58 (43%), Positives = 34/58 (58%)
Frame = +3
Query: 237 TVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDRADGAKVKSVCTFEGNTLKQVQK 410
T+E++ +GD + STFK T + FK G+EF+E DG VKSV FE +QK
Sbjct: 40 TLEIKVEGDLWYSNQYSTFKNTTLSFKLGQEFDETTPDGRTVKSVVNFENGKFIHIQK 97
Score = 49.6 bits (113), Expect = 3e-06
Identities = 23/40 (57%), Positives = 31/40 (77%)
Frame = +2
Query: 116 IKMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTP 235
+ EFVG+ +K+ SENF+E+MK +GVGLITRKAA + P
Sbjct: 1 MSQEFVGR-WKLIHSENFEEYMKEVGVGLITRKAAANLKP 39
>Z81127-2|CAB03387.1| 137|Caenorhabditis elegans Hypothetical
protein T22G5.2 protein.
Length = 137
Score = 49.2 bits (112), Expect = 4e-06
Identities = 22/37 (59%), Positives = 30/37 (81%)
Frame = +2
Query: 125 EFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTP 235
+F+G+ +K+ +ENFDE+MK IGVGLITRKAA + P
Sbjct: 6 DFIGR-WKLVQTENFDEYMKEIGVGLITRKAAAHLKP 41
Score = 48.8 bits (111), Expect = 5e-06
Identities = 24/56 (42%), Positives = 32/56 (57%)
Frame = +3
Query: 240 VELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDRADGAKVKSVCTFEGNTLKQVQ 407
+E+R DG+ +N STFK T++ FK GEEF E+ D S+ TFE L Q
Sbjct: 43 LEIRLDGETWNFDQFSTFKNTKLSFKLGEEFVENSPDDRTYNSLFTFENGKLTHRQ 98
>AF003141-5|AAK21486.1| 136|Caenorhabditis elegans Lipid binding
protein protein 5 protein.
Length = 136
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/58 (37%), Positives = 36/58 (62%)
Frame = +3
Query: 237 TVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDRADGAKVKSVCTFEGNTLKQVQK 410
T+E++ +G+++++ STFK T ++F G EF+E DG + KS T E + VQK
Sbjct: 41 TLEIKVNGNKWHVNQLSTFKNTTLEFTLGVEFDETTPDGRQFKSTITIEDGKVVHVQK 98
Score = 44.8 bits (101), Expect = 8e-05
Identities = 19/37 (51%), Positives = 29/37 (78%)
Frame = +2
Query: 125 EFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTP 235
+FVG+ +K+ SENF++++K +GVGL+ RKAA A P
Sbjct: 5 QFVGR-WKLVESENFEDYLKEVGVGLLLRKAACAAKP 40
>Z81127-7|CAB03391.2| 137|Caenorhabditis elegans Hypothetical
protein T22G5.6 protein.
Length = 137
Score = 47.2 bits (107), Expect = 2e-05
Identities = 20/37 (54%), Positives = 30/37 (81%)
Frame = +2
Query: 125 EFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTP 235
EF+G+ +K+ SENF+E++K IGVGL+ RKAA+ +P
Sbjct: 6 EFIGR-WKLVHSENFEEYLKEIGVGLLIRKAASLTSP 41
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +3
Query: 237 TVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDRADGAKVKSVCTFE-GNTLKQVQKA 413
T+E++ DGD ++ STFK ++ FK E+F E D ++ TFE G + K
Sbjct: 42 TLEIKLDGDTWHFNQYSTFKNNKLAFKIREKFVEIAPDERSYNTLVTFENGKFISHQDKI 101
Query: 414 PE 419
E
Sbjct: 102 KE 103
>AC024771-9|ABA61863.1| 137|Caenorhabditis elegans Lipid binding
protein protein 9,isoform b protein.
Length = 137
Score = 46.0 bits (104), Expect = 4e-05
Identities = 22/62 (35%), Positives = 37/62 (59%)
Frame = +3
Query: 222 TRSPRTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDRADGAKVKSVCTFEGNTLKQ 401
T++ +E +GDE+ + ++STFK +K+K G +E ADG V SV + E + L Q
Sbjct: 37 TKTKPALEFAVNGDEWTMNSNSTFKNYTLKWKLGTASDEKTADGRDVSSVFSIENDHLVQ 96
Query: 402 VQ 407
++
Sbjct: 97 IE 98
Score = 37.9 bits (84), Expect = 0.010
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +2
Query: 116 IKMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTP 235
I+ + VGK + SSENFDE++K +GVG R A P
Sbjct: 3 IQTDLVGK-WNFVSSENFDEYLKEVGVGWAIRTIATKTKP 41
>AC024771-8|AAK70656.1| 152|Caenorhabditis elegans Lipid binding
protein protein 9,isoform a protein.
Length = 152
Score = 46.0 bits (104), Expect = 4e-05
Identities = 22/62 (35%), Positives = 37/62 (59%)
Frame = +3
Query: 222 TRSPRTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDRADGAKVKSVCTFEGNTLKQ 401
T++ +E +GDE+ + ++STFK +K+K G +E ADG V SV + E + L Q
Sbjct: 52 TKTKPALEFAVNGDEWTMNSNSTFKNYTLKWKLGTASDEKTADGRDVSSVFSIENDHLVQ 111
Query: 402 VQ 407
++
Sbjct: 112 IE 113
Score = 37.9 bits (84), Expect = 0.010
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +2
Query: 116 IKMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTP 235
I+ + VGK + SSENFDE++K +GVG R A P
Sbjct: 18 IQTDLVGK-WNFVSSENFDEYLKEVGVGWAIRTIATKTKP 56
>U88184-10|AAK31514.2| 728|Caenorhabditis elegans Hypothetical
protein F36H5.3a protein.
Length = 728
Score = 31.5 bits (68), Expect = 0.85
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = -2
Query: 500 VQVTSLAVITAFISSGPNSLT*VTSRPFGGLLDLLEG 390
VQ+TSL +F+ GP S + V S+ FGG+ +LEG
Sbjct: 268 VQITSLK--RSFMKEGPISKSFVISQQFGGISSVLEG 302
>U88184-9|ABC71833.1| 843|Caenorhabditis elegans Hypothetical
protein F36H5.3b protein.
Length = 843
Score = 31.5 bits (68), Expect = 0.85
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = -2
Query: 500 VQVTSLAVITAFISSGPNSLT*VTSRPFGGLLDLLEG 390
VQ+TSL +F+ GP S + V S+ FGG+ +LEG
Sbjct: 268 VQITSLK--RSFMKEGPISKSFVISQQFGGISSVLEG 302
>U64855-7|AAB04984.1| 145|Caenorhabditis elegans Lipid binding
protein protein 4 protein.
Length = 145
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 113 SIKMEFVGKKYKMTSSENFDEFMKTIGVGLITRK 214
S+ +F G+ Y++ SENFDEF+ + GV R+
Sbjct: 2 SVPDKFFGR-YQLDKSENFDEFLSSKGVNWFVRQ 34
>U40420-6|ABD63223.1| 150|Caenorhabditis elegans Lipid binding
protein protein 3,isoform b protein.
Length = 150
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 116 IKMEFVGKKYKMTSSENFDEFMKTIGVGLITRK 214
I +F GK Y + SENFDEF+ GV R+
Sbjct: 8 IPEKFFGK-YDLDRSENFDEFLAAKGVSWFVRQ 39
>U40420-5|AAA81433.2| 165|Caenorhabditis elegans Lipid binding
protein protein 3,isoform a protein.
Length = 165
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 116 IKMEFVGKKYKMTSSENFDEFMKTIGVGLITRK 214
I +F GK Y + SENFDEF+ GV R+
Sbjct: 23 IPEKFFGK-YDLDRSENFDEFLAAKGVSWFVRQ 54
>AF022973-3|AAC25799.1| 551|Caenorhabditis elegans Asparaginyl trna
synthetase protein2 protein.
Length = 551
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -2
Query: 158 RKSSCISC-LRIPFL*INFIDLRERFLIRLFLAPAKTRIKILRIPYSG 18
R +SC +R+PFL FIDL R L P K +LR + G
Sbjct: 380 RSTSCHGLEIRVPFLDKRFIDLVSRLPPSYKLMPMKLEKHVLRSAFEG 427
>U40420-8|AAA81435.1| 161|Caenorhabditis elegans Lipid binding
protein protein 2 protein.
Length = 161
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 143 YKMTSSENFDEFMKTIGVGLITRKAANAVT 232
+ + SENFDE++ G G TRK T
Sbjct: 30 FDLDHSENFDEYLTAKGYGWFTRKLVTFAT 59
>U40420-7|AAA81434.1| 159|Caenorhabditis elegans Lipid binding
protein protein 1 protein.
Length = 159
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 143 YKMTSSENFDEFMKTIGVGLITRKAANAVT 232
+ + SENFDE++ G G TRK T
Sbjct: 28 FDLDHSENFDEYLTAKGYGWFTRKLVTFAT 57
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,408,323
Number of Sequences: 27780
Number of extensions: 264818
Number of successful extensions: 680
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 680
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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