Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_J17
(889 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR533532-1|CAG38563.1| 275|Homo sapiens PROSC protein. 188 2e-47
BC012334-1|AAH12334.1| 275|Homo sapiens proline synthetase co-t... 188 2e-47
AB018566-1|BAA36842.1| 275|Homo sapiens Proline synthetase asso... 188 2e-47
AL590543-3|CAI10943.1| 722|Homo sapiens chromosome 6 open readi... 31 4.2
AL359494-1|CAH71980.1| 722|Homo sapiens chromosome 6 open readi... 31 4.2
M14642-1|AAA51745.1| 396|Homo sapiens APOA4 protein. 31 5.6
M13654-1|AAA51744.1| 396|Homo sapiens APOA4 protein. 31 5.6
AJ006778-1|CAA07243.1| 2785|Homo sapiens DRIM protein protein. 31 5.6
BC067299-1|AAH67299.1| 490|Homo sapiens Mdm4, transformed 3T3 c... 30 9.8
AY207458-1|AAO13494.1| 490|Homo sapiens Mdm4, transformed 3T3 c... 30 9.8
AL512306-5|CAI14100.1| 490|Homo sapiens Mdm4, transformed 3T3 c... 30 9.8
AL512306-3|CAI14098.1| 213|Homo sapiens Mdm4, transformed 3T3 c... 30 9.8
AL121586-7|CAB89415.1| 2442|Homo sapiens centrosomal protein 250... 30 9.8
AK223228-1|BAD96948.1| 490|Homo sapiens mouse double minute 4 h... 30 9.8
AF049105-1|AAC07988.1| 2442|Homo sapiens centrosomal Nek2-associ... 30 9.8
AF022655-1|AAC06349.1| 2442|Homo sapiens cep250 centrosome assoc... 30 9.8
AF007111-1|AAB62928.1| 490|Homo sapiens MDM2-like p53-binding p... 30 9.8
>CR533532-1|CAG38563.1| 275|Homo sapiens PROSC protein.
Length = 275
Score = 188 bits (459), Expect = 2e-47
Identities = 88/150 (58%), Positives = 112/150 (74%)
Frame = +2
Query: 263 LKTVLSQIEIAVARRSKDLPQIAPRLVAVSKIKPVELIVEAYNAGQRHFGENYVNELSDK 442
L+ V +++ AVARR +DLP I PRLVAVSK KP ++++EAY GQR FGENYV EL +K
Sbjct: 17 LRAVNERVQQAVARRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQRTFGENYVQELLEK 76
Query: 443 ASDPLILEKCKDIKWHFIGHLQTNKINKLLGSPGLFMVETVDSEKLADNLNKQWLKYRKE 622
AS+P IL C +IKWHFIGHLQ +NKL+ P LFM+ETVDS KLAD +N W + +
Sbjct: 77 ASNPKILSLCPEIKWHFIGHLQKQNVNKLMAVPNLFMLETVDSVKLADKVNSSWQR-KGS 135
Query: 623 KERLRVMVQVNTSGEQAKSGLEPLETXKLL 712
ERL+VMVQ+NTSGE++K GL P ET ++
Sbjct: 136 PERLKVMVQINTSGEESKHGLPPSETIAIV 165
>BC012334-1|AAH12334.1| 275|Homo sapiens proline synthetase
co-transcribed homolog (bacterial) protein.
Length = 275
Score = 188 bits (459), Expect = 2e-47
Identities = 88/150 (58%), Positives = 112/150 (74%)
Frame = +2
Query: 263 LKTVLSQIEIAVARRSKDLPQIAPRLVAVSKIKPVELIVEAYNAGQRHFGENYVNELSDK 442
L+ V +++ AVARR +DLP I PRLVAVSK KP ++++EAY GQR FGENYV EL +K
Sbjct: 17 LRAVNERVQQAVARRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQRTFGENYVQELLEK 76
Query: 443 ASDPLILEKCKDIKWHFIGHLQTNKINKLLGSPGLFMVETVDSEKLADNLNKQWLKYRKE 622
AS+P IL C +IKWHFIGHLQ +NKL+ P LFM+ETVDS KLAD +N W + +
Sbjct: 77 ASNPKILSLCPEIKWHFIGHLQKQNVNKLMAVPNLFMLETVDSVKLADKVNSSWQR-KGS 135
Query: 623 KERLRVMVQVNTSGEQAKSGLEPLETXKLL 712
ERL+VMVQ+NTSGE++K GL P ET ++
Sbjct: 136 PERLKVMVQINTSGEESKHGLPPSETIAIV 165
>AB018566-1|BAA36842.1| 275|Homo sapiens Proline synthetase
associated protein.
Length = 275
Score = 188 bits (459), Expect = 2e-47
Identities = 88/150 (58%), Positives = 112/150 (74%)
Frame = +2
Query: 263 LKTVLSQIEIAVARRSKDLPQIAPRLVAVSKIKPVELIVEAYNAGQRHFGENYVNELSDK 442
L+ V +++ AVARR +DLP I PRLVAVSK KP ++++EAY GQR FGENYV EL +K
Sbjct: 17 LRAVNERVQQAVARRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQRTFGENYVQELLEK 76
Query: 443 ASDPLILEKCKDIKWHFIGHLQTNKINKLLGSPGLFMVETVDSEKLADNLNKQWLKYRKE 622
AS+P IL C +IKWHFIGHLQ +NKL+ P LFM+ETVDS KLAD +N W + +
Sbjct: 77 ASNPKILSLCPEIKWHFIGHLQKQNVNKLMAVPNLFMLETVDSVKLADKVNSSWQR-KGS 135
Query: 623 KERLRVMVQVNTSGEQAKSGLEPLETXKLL 712
ERL+VMVQ+NTSGE++K GL P ET ++
Sbjct: 136 PERLKVMVQINTSGEESKHGLPPSETIAIV 165
>AL590543-3|CAI10943.1| 722|Homo sapiens chromosome 6 open reading
frame 97 protein.
Length = 722
Score = 31.5 bits (68), Expect = 4.2
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Frame = +2
Query: 461 LEKCKDIKWHFIGHLQTNKINKLLGSPGLFMVETVDSEKLADNLNK-----QWLKYRKEK 625
L C+D+ L N+L S L ++T++ K ++LNK + +K + EK
Sbjct: 549 LNTCRDLHTELKAKLADT--NELKASAWLHFIKTLEQTKAIEDLNKSRDQLEKMKEKAEK 606
Query: 626 ERLRVMVQVNTSGEQAKSGLE 688
+ + V +++T+ +AK E
Sbjct: 607 KLMSVKSELDTTEHEAKENKE 627
>AL359494-1|CAH71980.1| 722|Homo sapiens chromosome 6 open reading
frame 97 protein.
Length = 722
Score = 31.5 bits (68), Expect = 4.2
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Frame = +2
Query: 461 LEKCKDIKWHFIGHLQTNKINKLLGSPGLFMVETVDSEKLADNLNK-----QWLKYRKEK 625
L C+D+ L N+L S L ++T++ K ++LNK + +K + EK
Sbjct: 549 LNTCRDLHTELKAKLADT--NELKASAWLHFIKTLEQTKAIEDLNKSRDQLEKMKEKAEK 606
Query: 626 ERLRVMVQVNTSGEQAKSGLE 688
+ + V +++T+ +AK E
Sbjct: 607 KLMSVKSELDTTEHEAKENKE 627
>M14642-1|AAA51745.1| 396|Homo sapiens APOA4 protein.
Length = 396
Score = 31.1 bits (67), Expect = 5.6
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +2
Query: 569 SEKLADNLNKQWLKYRKEKERLRVMVQVNTSGEQAKSGLEPL 694
S+K+ DNL + L+ R E ++ QVNT EQ + L+PL
Sbjct: 121 SQKIGDNLRE--LQQRLEPYADQLRTQVNTQAEQLRRQLDPL 160
>M13654-1|AAA51744.1| 396|Homo sapiens APOA4 protein.
Length = 396
Score = 31.1 bits (67), Expect = 5.6
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +2
Query: 569 SEKLADNLNKQWLKYRKEKERLRVMVQVNTSGEQAKSGLEPL 694
S+K+ DNL + L+ R E ++ QVNT EQ + L+PL
Sbjct: 121 SQKIGDNLRE--LQQRLEPYADQLRTQVNTQAEQLRRQLDPL 160
>AJ006778-1|CAA07243.1| 2785|Homo sapiens DRIM protein protein.
Length = 2785
Score = 31.1 bits (67), Expect = 5.6
Identities = 40/140 (28%), Positives = 63/140 (45%), Gaps = 12/140 (8%)
Frame = +2
Query: 173 LIHTFLVDEV*LNLQXMTSEVDPKVDIMYGLKTVLSQIEIAVARRSKDLPQIAPRLV--- 343
LI TF +L +T DP++D +K I + RR++ L ++A +L+
Sbjct: 1548 LIQTFPNQLEFKDLVQLTHYHDPEMDFFENMK------HIQIHRRARALKKLAKQLMEGK 1601
Query: 344 AVSKIKPVELIVEAYNAGQRHFGENYV-NELSDKASDPLILEKCKDIKW--------HFI 496
V K ++ + Y A F E + +E A+ +I CK + W HFI
Sbjct: 1602 VVLSSKSLQNYIMPY-AMTPIFDEKMLKHENITTAATEIIGAICKHLSWSAYMYYLKHFI 1660
Query: 497 GHLQTNKINKLLGSPGLFMV 556
LQT +IN+ LG L +V
Sbjct: 1661 HVLQTGQINQKLGVSLLVIV 1680
>BC067299-1|AAH67299.1| 490|Homo sapiens Mdm4, transformed 3T3 cell
double minute 4, p53 binding protein (mouse) protein.
Length = 490
Score = 30.3 bits (65), Expect = 9.8
Identities = 16/67 (23%), Positives = 32/67 (47%)
Frame = +2
Query: 479 IKWHFIGHLQTNKINKLLGSPGLFMVETVDSEKLADNLNKQWLKYRKEKERLRVMVQVNT 658
+ W F+G+L++N + GS L + V + ++D + W E+L V ++V
Sbjct: 198 LPWWFLGNLRSNYTPRSNGSTDLQTNQDVGTAIVSDTTDDLWFLNESVSEQLGVGIKVEA 257
Query: 659 SGEQAKS 679
+ + S
Sbjct: 258 ADTEQTS 264
>AY207458-1|AAO13494.1| 490|Homo sapiens Mdm4, transformed 3T3 cell
double minute 4, p53 binding protein (mouse) protein.
Length = 490
Score = 30.3 bits (65), Expect = 9.8
Identities = 16/67 (23%), Positives = 32/67 (47%)
Frame = +2
Query: 479 IKWHFIGHLQTNKINKLLGSPGLFMVETVDSEKLADNLNKQWLKYRKEKERLRVMVQVNT 658
+ W F+G+L++N + GS L + V + ++D + W E+L V ++V
Sbjct: 198 LPWWFLGNLRSNYTPRSNGSTDLQTNQDVGTAIVSDTTDDLWFLNESVSEQLGVGIKVEA 257
Query: 659 SGEQAKS 679
+ + S
Sbjct: 258 ADTEQTS 264
>AL512306-5|CAI14100.1| 490|Homo sapiens Mdm4, transformed 3T3 cell
double minute 4, p53 binding protein (mouse) protein.
Length = 490
Score = 30.3 bits (65), Expect = 9.8
Identities = 16/67 (23%), Positives = 32/67 (47%)
Frame = +2
Query: 479 IKWHFIGHLQTNKINKLLGSPGLFMVETVDSEKLADNLNKQWLKYRKEKERLRVMVQVNT 658
+ W F+G+L++N + GS L + V + ++D + W E+L V ++V
Sbjct: 198 LPWWFLGNLRSNYTPRSNGSTDLQTNQDVGTAIVSDTTDDLWFLNESVSEQLGVGIKVEA 257
Query: 659 SGEQAKS 679
+ + S
Sbjct: 258 ADTEQTS 264
>AL512306-3|CAI14098.1| 213|Homo sapiens Mdm4, transformed 3T3 cell
double minute 4, p53 binding protein (mouse) protein.
Length = 213
Score = 30.3 bits (65), Expect = 9.8
Identities = 16/67 (23%), Positives = 32/67 (47%)
Frame = +2
Query: 479 IKWHFIGHLQTNKINKLLGSPGLFMVETVDSEKLADNLNKQWLKYRKEKERLRVMVQVNT 658
+ W F+G+L++N + GS L + V + ++D + W E+L V ++V
Sbjct: 83 LPWWFLGNLRSNYTPRSNGSTDLQTNQDVGTAIVSDTTDDLWFLNESVSEQLGVGIKVEA 142
Query: 659 SGEQAKS 679
+ + S
Sbjct: 143 ADTEQTS 149
>AL121586-7|CAB89415.1| 2442|Homo sapiens centrosomal protein 250kDa
protein.
Length = 2442
Score = 30.3 bits (65), Expect = 9.8
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +2
Query: 482 KWHFIGHLQTNKINKLLGSPGLFMVETVDSEKLADNLNKQWLKYRKEKERLRVMVQV 652
+W G ++ KL G +TVD + D+L+K+ +K +E LR ++V
Sbjct: 425 QWEEEGKALRQRLQKLTGERDTLAGQTVDLQGEVDSLSKERELLQKAREELRQQLEV 481
>AK223228-1|BAD96948.1| 490|Homo sapiens mouse double minute 4
homolog protein.
Length = 490
Score = 30.3 bits (65), Expect = 9.8
Identities = 16/67 (23%), Positives = 32/67 (47%)
Frame = +2
Query: 479 IKWHFIGHLQTNKINKLLGSPGLFMVETVDSEKLADNLNKQWLKYRKEKERLRVMVQVNT 658
+ W F+G+L++N + GS L + V + ++D + W E+L V ++V
Sbjct: 198 LPWWFLGNLRSNYTPRSNGSTDLQTNQDVGTAIVSDTTDDLWFLNESVSEQLGVGIKVEA 257
Query: 659 SGEQAKS 679
+ + S
Sbjct: 258 ADTEQTS 264
>AF049105-1|AAC07988.1| 2442|Homo sapiens centrosomal
Nek2-associated protein 1 protein.
Length = 2442
Score = 30.3 bits (65), Expect = 9.8
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +2
Query: 482 KWHFIGHLQTNKINKLLGSPGLFMVETVDSEKLADNLNKQWLKYRKEKERLRVMVQV 652
+W G ++ KL G +TVD + D+L+K+ +K +E LR ++V
Sbjct: 425 QWEEEGKALRQRLQKLTGERDTLAGQTVDLQGEVDSLSKERELLQKAREELRQQLEV 481
>AF022655-1|AAC06349.1| 2442|Homo sapiens cep250 centrosome
associated protein protein.
Length = 2442
Score = 30.3 bits (65), Expect = 9.8
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +2
Query: 482 KWHFIGHLQTNKINKLLGSPGLFMVETVDSEKLADNLNKQWLKYRKEKERLRVMVQV 652
+W G ++ KL G +TVD + D+L+K+ +K +E LR ++V
Sbjct: 425 QWEEEGKALRQRLQKLTGERDTLAGQTVDLQGEVDSLSKERELLQKAREELRQQLEV 481
>AF007111-1|AAB62928.1| 490|Homo sapiens MDM2-like p53-binding
protein protein.
Length = 490
Score = 30.3 bits (65), Expect = 9.8
Identities = 16/67 (23%), Positives = 32/67 (47%)
Frame = +2
Query: 479 IKWHFIGHLQTNKINKLLGSPGLFMVETVDSEKLADNLNKQWLKYRKEKERLRVMVQVNT 658
+ W F+G+L++N + GS L + V + ++D + W E+L V ++V
Sbjct: 198 LPWWFLGNLRSNYTPRSNGSTDLQTNQDVGTAIVSDTTDDLWFLNESVSEQLGVGIKVEA 257
Query: 659 SGEQAKS 679
+ + S
Sbjct: 258 ADTEQTS 264
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,187,004
Number of Sequences: 237096
Number of extensions: 2294332
Number of successful extensions: 3361
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3355
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -