Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_J10
         (874 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1121 + 27767707-27768065,27768612-27769034,27770013-277701...    30   2.1  
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076           29   3.7  

>06_03_1121 +
           27767707-27768065,27768612-27769034,27770013-27770175,
           27770271-27770381,27770895-27770963,27771117-27771203,
           27771967-27772752
          Length = 665

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 13/29 (44%), Positives = 13/29 (44%)
 Frame = -3

Query: 740 PPFGGXXXPXPXPKXPGXXGFXGGXXGXG 654
           PP GG   P P    PG  G  GG  G G
Sbjct: 17  PPAGGGGGPAPHSSDPGGVGGGGGGGGPG 45


>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
          Length = 906

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 15/38 (39%), Positives = 15/38 (39%)
 Frame = +1

Query: 619 PXPXXKGXXFWGPXPXXPPKKPXXPGXLGXGXGXXXPP 732
           P P   G    GP P  PP  P  P   G G G   PP
Sbjct: 338 PSPSAAGAGS-GPPPPPPPAAPAAPRPPGPGPGPPPPP 374


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,592,996
Number of Sequences: 37544
Number of extensions: 163689
Number of successful extensions: 281
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 279
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)