Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_J09
(885 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S57284-1|AAB25906.1| 437|Caenorhabditis elegans S-adenosylhomoc... 193 2e-49
M64306-1|AAA28062.1| 437|Caenorhabditis elegans S-adenosylhomoc... 193 2e-49
AF043699-5|AAB97565.1| 437|Caenorhabditis elegans Hypothetical ... 193 2e-49
AC006659-2|AAF39883.2| 977|Caenorhabditis elegans Hypothetical ... 29 3.3
U80955-5|AAG01559.2| 573|Caenorhabditis elegans Ferm domain (pr... 29 4.4
U80955-4|ABB51180.1| 589|Caenorhabditis elegans Ferm domain (pr... 29 4.4
U50199-6|AAA91266.1| 470|Caenorhabditis elegans Vacuolar h atpa... 29 4.4
AF125959-3|AAD14731.1| 531|Caenorhabditis elegans Udp-glucurono... 28 7.7
>S57284-1|AAB25906.1| 437|Caenorhabditis elegans
S-adenosylhomocysteine hydrolase protein.
Length = 437
Score = 193 bits (470), Expect = 2e-49
Identities = 87/117 (74%), Positives = 101/117 (86%)
Frame = +1
Query: 208 KPPYKIADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVL 387
KP YK+AD KLA++GRKEI+LAE EMPGLMA R KY P++ LKGARIAG LHMT+QTAVL
Sbjct: 5 KPAYKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVL 64
Query: 388 IETLIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIF 558
IETL LGAEVQWSS NI+STQD AAAA+ G+P+YAWKGETD+EY WCIEQT++F
Sbjct: 65 IETLTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDEEYEWCIEQTIVF 121
Score = 156 bits (379), Expect = 2e-38
Identities = 78/107 (72%), Positives = 85/107 (79%), Gaps = 1/107 (0%)
Frame = +2
Query: 563 DGKPLNMILDDGGDLTNLVHTKYPDLLKDVKGITEETTTGVHNLYKMFREGLLKVPAINV 742
DG+PLNMILDDGGDLTNLVH KYP L ++G++EETTTGVHNL KM +G LKVPAINV
Sbjct: 123 DGQPLNMILDDGGDLTNLVHAKYPQYLAGIRGLSEETTTGVHNLAKMLAKGDLKVPAINV 182
Query: 743 NDSVTKSKFDNLYGCRESLLDGIKGQQT**L-XESCVXAGYGDVGKG 880
NDSVTKSKFDNLYG RESL DGIK L + V AGYGDVGKG
Sbjct: 183 NDSVTKSKFDNLYGIRESLPDGIKRATDVMLAGKVAVVAGYGDVGKG 229
>M64306-1|AAA28062.1| 437|Caenorhabditis elegans
S-adenosylhomocysteine hydrolase protein.
Length = 437
Score = 193 bits (470), Expect = 2e-49
Identities = 87/117 (74%), Positives = 101/117 (86%)
Frame = +1
Query: 208 KPPYKIADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVL 387
KP YK+AD KLA++GRKEI+LAE EMPGLMA R KY P++ LKGARIAG LHMT+QTAVL
Sbjct: 5 KPAYKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVL 64
Query: 388 IETLIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIF 558
IETL LGAEVQWSS NI+STQD AAAA+ G+P+YAWKGETD+EY WCIEQT++F
Sbjct: 65 IETLTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDEEYEWCIEQTIVF 121
Score = 156 bits (379), Expect = 2e-38
Identities = 78/107 (72%), Positives = 85/107 (79%), Gaps = 1/107 (0%)
Frame = +2
Query: 563 DGKPLNMILDDGGDLTNLVHTKYPDLLKDVKGITEETTTGVHNLYKMFREGLLKVPAINV 742
DG+PLNMILDDGGDLTNLVH KYP L ++G++EETTTGVHNL KM +G LKVPAINV
Sbjct: 123 DGQPLNMILDDGGDLTNLVHAKYPQYLAGIRGLSEETTTGVHNLAKMLAKGDLKVPAINV 182
Query: 743 NDSVTKSKFDNLYGCRESLLDGIKGQQT**L-XESCVXAGYGDVGKG 880
NDSVTKSKFDNLYG RESL DGIK L + V AGYGDVGKG
Sbjct: 183 NDSVTKSKFDNLYGIRESLPDGIKRATDVMLAGKVAVVAGYGDVGKG 229
>AF043699-5|AAB97565.1| 437|Caenorhabditis elegans Hypothetical
protein K02F2.2 protein.
Length = 437
Score = 193 bits (470), Expect = 2e-49
Identities = 87/117 (74%), Positives = 101/117 (86%)
Frame = +1
Query: 208 KPPYKIADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVL 387
KP YK+AD KLA++GRKEI+LAE EMPGLMA R KY P++ LKGARIAG LHMT+QTAVL
Sbjct: 5 KPAYKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVL 64
Query: 388 IETLIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIF 558
IETL LGAEVQWSS NI+STQD AAAA+ G+P+YAWKGETD+EY WCIEQT++F
Sbjct: 65 IETLTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDEEYEWCIEQTIVF 121
Score = 156 bits (379), Expect = 2e-38
Identities = 78/107 (72%), Positives = 85/107 (79%), Gaps = 1/107 (0%)
Frame = +2
Query: 563 DGKPLNMILDDGGDLTNLVHTKYPDLLKDVKGITEETTTGVHNLYKMFREGLLKVPAINV 742
DG+PLNMILDDGGDLTNLVH KYP L ++G++EETTTGVHNL KM +G LKVPAINV
Sbjct: 123 DGQPLNMILDDGGDLTNLVHAKYPQYLAGIRGLSEETTTGVHNLAKMLAKGDLKVPAINV 182
Query: 743 NDSVTKSKFDNLYGCRESLLDGIKGQQT**L-XESCVXAGYGDVGKG 880
NDSVTKSKFDNLYG RESL DGIK L + V AGYGDVGKG
Sbjct: 183 NDSVTKSKFDNLYGIRESLPDGIKRATDVMLAGKVAVVAGYGDVGKG 229
>AC006659-2|AAF39883.2| 977|Caenorhabditis elegans Hypothetical
protein H16O14.1 protein.
Length = 977
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -1
Query: 471 CSCGLVLCTI-NVTAGPLYLCSQFY*SLNKNRCLYCHV*AAGYSGTFEYFSWSI 313
C CG+++ I N+TA Y +N L + + G+ F YF WS+
Sbjct: 442 CECGILIAVIENITALITQFFLMCYLGVNAACALQSLLKSPGWRPGFRYFHWSL 495
>U80955-5|AAG01559.2| 573|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 2,
isoform a protein.
Length = 573
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -1
Query: 879 PFPTSP*PAXTQLSXNHYVCCPLIPSSKDSLHPYKLSNLLFVT 751
P PTSP + N ++ PL PSS S + LS++ +T
Sbjct: 428 PLPTSPDLKKPVNNSNPFISDPLTPSSSSSSSSHNLSHVTKIT 470
>U80955-4|ABB51180.1| 589|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 2,
isoform b protein.
Length = 589
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -1
Query: 879 PFPTSP*PAXTQLSXNHYVCCPLIPSSKDSLHPYKLSNLLFVT 751
P PTSP + N ++ PL PSS S + LS++ +T
Sbjct: 444 PLPTSPDLKKPVNNSNPFISDPLTPSSSSSSSSHNLSHVTKIT 486
>U50199-6|AAA91266.1| 470|Caenorhabditis elegans Vacuolar h atpase
protein 15 protein.
Length = 470
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2
Query: 632 PDLLKDVKGITEETTTGVHNL 694
PDL DVK +TEE T VH+L
Sbjct: 316 PDLEDDVKFLTEELTLSVHDL 336
>AF125959-3|AAD14731.1| 531|Caenorhabditis elegans
Udp-glucuronosyltransferase protein14 protein.
Length = 531
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 698 KMFREGLLKVPAINVNDSVTKSKFDNLYGCRESL 799
+M+ LLK+P+I + SV F+N +G SL
Sbjct: 154 EMYLAHLLKIPSIPIKSSVRYPAFNNAFGQPSSL 187
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,894,005
Number of Sequences: 27780
Number of extensions: 430459
Number of successful extensions: 1044
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1038
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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