Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_J06
(960 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 376 e-104
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 376 e-104
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 376 e-104
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 376 e-104
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 351 3e-97
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 351 3e-97
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 350 8e-97
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 348 3e-96
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 347 9e-96
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 345 2e-95
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 345 2e-95
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 340 8e-94
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 325 2e-89
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 322 3e-88
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 300 1e-81
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 286 2e-77
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 177 1e-44
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 174 7e-44
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 174 7e-44
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 174 7e-44
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 173 2e-43
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 172 3e-43
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 148 7e-36
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 148 7e-36
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 99 4e-21
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 99 4e-21
AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical ... 32 0.70
AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear recep... 29 4.9
AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormo... 29 4.9
AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormo... 29 4.9
Z70309-13|CAL36512.2| 383|Caenorhabditis elegans Hypothetical p... 29 6.5
Z70309-12|CAB54293.3| 413|Caenorhabditis elegans Hypothetical p... 29 6.5
Z70309-11|CAB54291.3| 408|Caenorhabditis elegans Hypothetical p... 29 6.5
AL110485-19|CAB60367.2| 529|Caenorhabditis elegans Hypothetical... 28 8.6
AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical... 28 8.6
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 376 bits (925), Expect = e-104
Identities = 168/200 (84%), Positives = 183/200 (91%)
Frame = +2
Query: 167 HVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVF 346
H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+HVPRAV
Sbjct: 8 HIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVM 67
Query: 347 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 526
VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDRIR+LAD
Sbjct: 68 VDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLAD 127
Query: 527 QCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 706
CTGLQGFL+FH LLMERLSVDYGKK+KLEF+IYPAPQVSTAVVEPYNS
Sbjct: 128 NCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNS 187
Query: 707 ILTTHTTLEHSDCAFMVDNE 766
ILTTHTTLEHSDC+FMVDNE
Sbjct: 188 ILTTHTTLEHSDCSFMVDNE 207
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 376 bits (925), Expect = e-104
Identities = 168/200 (84%), Positives = 183/200 (91%)
Frame = +2
Query: 167 HVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVF 346
H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+HVPRAV
Sbjct: 7 HIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVM 66
Query: 347 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 526
VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDRIR+LAD
Sbjct: 67 VDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLAD 126
Query: 527 QCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 706
CTGLQGFL+FH LLMERLSVDYGKK+KLEF+IYPAPQVSTAVVEPYNS
Sbjct: 127 NCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNS 186
Query: 707 ILTTHTTLEHSDCAFMVDNE 766
ILTTHTTLEHSDC+FMVDNE
Sbjct: 187 ILTTHTTLEHSDCSFMVDNE 206
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 376 bits (925), Expect = e-104
Identities = 168/200 (84%), Positives = 183/200 (91%)
Frame = +2
Query: 167 HVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVF 346
H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+HVPRAV
Sbjct: 8 HIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVM 67
Query: 347 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 526
VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDRIR+LAD
Sbjct: 68 VDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLAD 127
Query: 527 QCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 706
CTGLQGFL+FH LLMERLSVDYGKK+KLEF+IYPAPQVSTAVVEPYNS
Sbjct: 128 NCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNS 187
Query: 707 ILTTHTTLEHSDCAFMVDNE 766
ILTTHTTLEHSDC+FMVDNE
Sbjct: 188 ILTTHTTLEHSDCSFMVDNE 207
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 376 bits (925), Expect = e-104
Identities = 168/200 (84%), Positives = 183/200 (91%)
Frame = +2
Query: 167 HVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVF 346
H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+HVPRAV
Sbjct: 8 HIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVM 67
Query: 347 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 526
VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDRIR+LAD
Sbjct: 68 VDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLAD 127
Query: 527 QCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 706
CTGLQGFL+FH LLMERLSVDYGKK+KLEF+IYPAPQVSTAVVEPYNS
Sbjct: 128 NCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNS 187
Query: 707 ILTTHTTLEHSDCAFMVDNE 766
ILTTHTTLEHSDC+FMVDNE
Sbjct: 188 ILTTHTTLEHSDCSFMVDNE 207
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 351 bits (864), Expect = 3e-97
Identities = 159/200 (79%), Positives = 177/200 (88%)
Frame = +2
Query: 167 HVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVF 346
HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G++VPR++F
Sbjct: 8 HVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGRYVPRSIF 65
Query: 347 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 526
VDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLDRIR+LAD
Sbjct: 66 VDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLAD 125
Query: 527 QCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 706
C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQVSTAVVEPYNS
Sbjct: 126 NCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNS 185
Query: 707 ILTTHTTLEHSDCAFMVDNE 766
ILTTHTTLEHSDCAFMVDNE
Sbjct: 186 ILTTHTTLEHSDCAFMVDNE 205
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 351 bits (864), Expect = 3e-97
Identities = 159/200 (79%), Positives = 177/200 (88%)
Frame = +2
Query: 167 HVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVF 346
HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G++VPR++F
Sbjct: 8 HVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGRYVPRSIF 65
Query: 347 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 526
VDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLDRIR+LAD
Sbjct: 66 VDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLAD 125
Query: 527 QCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 706
C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQVSTAVVEPYNS
Sbjct: 126 NCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNS 185
Query: 707 ILTTHTTLEHSDCAFMVDNE 766
ILTTHTTLEHSDCAFMVDNE
Sbjct: 186 ILTTHTTLEHSDCAFMVDNE 205
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 350 bits (861), Expect = 8e-97
Identities = 158/200 (79%), Positives = 177/200 (88%)
Frame = +2
Query: 167 HVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVF 346
HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G++VPR++F
Sbjct: 8 HVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGRYVPRSIF 65
Query: 347 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 526
VDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLDRIR+LAD
Sbjct: 66 VDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLAD 125
Query: 527 QCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 706
C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQVSTAVVEPYNS
Sbjct: 126 NCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNS 185
Query: 707 ILTTHTTLEHSDCAFMVDNE 766
ILTTHTTLEHSDCAFMVDNE
Sbjct: 186 ILTTHTTLEHSDCAFMVDNE 205
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 348 bits (856), Expect = 3e-96
Identities = 157/200 (78%), Positives = 176/200 (88%)
Frame = +2
Query: 167 HVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVF 346
HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G++VPR++F
Sbjct: 8 HVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGRYVPRSIF 65
Query: 347 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 526
VDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLDRIR+LAD
Sbjct: 66 VDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLAD 125
Query: 527 QCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 706
C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQV TAVVEPYNS
Sbjct: 126 NCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVCTAVVEPYNS 185
Query: 707 ILTTHTTLEHSDCAFMVDNE 766
ILTTHTTLEHSDCAFMVDNE
Sbjct: 186 ILTTHTTLEHSDCAFMVDNE 205
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 347 bits (852), Expect = 9e-96
Identities = 154/200 (77%), Positives = 174/200 (87%)
Frame = +2
Query: 167 HVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVF 346
HVGQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET AGKHVPRA+
Sbjct: 13 HVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAGKHVPRAIM 72
Query: 347 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 526
VDLEPT +DE+RTGTY+ LFHPEQL+TGKEDAANNYARGHYTIGKEI+D+V+DR+R+L +
Sbjct: 73 VDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVMDRVRRLVE 132
Query: 527 QCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 706
C GLQGFL+FH LLMERLSVDYGKKSKLEF IYPAPQVST++VEPYNS
Sbjct: 133 NCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYGKKSKLEFCIYPAPQVSTSMVEPYNS 192
Query: 707 ILTTHTTLEHSDCAFMVDNE 766
ILTTHTTLEHSDC+FMVDNE
Sbjct: 193 ILTTHTTLEHSDCSFMVDNE 212
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 345 bits (849), Expect = 2e-95
Identities = 156/200 (78%), Positives = 175/200 (87%)
Frame = +2
Query: 167 HVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVF 346
HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G++VPR++F
Sbjct: 8 HVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGRYVPRSIF 65
Query: 347 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 526
VDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LDRIR+LAD
Sbjct: 66 VDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRRLAD 125
Query: 527 QCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 706
C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQVSTAVVEPYNS
Sbjct: 126 NCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNS 185
Query: 707 ILTTHTTLEHSDCAFMVDNE 766
ILTTHTTLEHSDCAFMVDNE
Sbjct: 186 ILTTHTTLEHSDCAFMVDNE 205
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 345 bits (849), Expect = 2e-95
Identities = 156/200 (78%), Positives = 175/200 (87%)
Frame = +2
Query: 167 HVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVF 346
HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G++VPR++F
Sbjct: 8 HVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGRYVPRSIF 65
Query: 347 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 526
VDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LDRIR+LAD
Sbjct: 66 VDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRRLAD 125
Query: 527 QCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 706
C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQVSTAVVEPYNS
Sbjct: 126 NCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNS 185
Query: 707 ILTTHTTLEHSDCAFMVDNE 766
ILTTHTTLEHSDCAFMVDNE
Sbjct: 186 ILTTHTTLEHSDCAFMVDNE 205
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 340 bits (836), Expect = 8e-94
Identities = 148/200 (74%), Positives = 175/200 (87%)
Frame = +2
Query: 167 HVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVF 346
H+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +GKHVPRA+F
Sbjct: 8 HIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGKHVPRAIF 67
Query: 347 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 526
VDLEPTV+DEVRTGTY +LFHPEQLI+GKEDAANNYARGHYTIGKE++D+V+DR+R+L +
Sbjct: 68 VDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMDRVRRLTE 127
Query: 527 QCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 706
+C LQGFLIFH L+MERLS+DYGKK+KLEF+IYPAPQ+ST++VEPYNS
Sbjct: 128 RCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYGKKAKLEFSIYPAPQISTSMVEPYNS 187
Query: 707 ILTTHTTLEHSDCAFMVDNE 766
+LTTHTTLEHSDC+F++DNE
Sbjct: 188 LLTTHTTLEHSDCSFIMDNE 207
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 325 bits (799), Expect = 2e-89
Identities = 146/200 (73%), Positives = 166/200 (83%)
Frame = +2
Query: 167 HVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVF 346
HVGQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG G+HVPR++F
Sbjct: 8 HVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGRHVPRSIF 64
Query: 347 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 526
VDLEPTVVDE+RTG Y++LFHPEQ++TGKEDAANNYARGHYT+GKEI+D LDRIR+LA+
Sbjct: 65 VDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRIRRLAN 124
Query: 527 QCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 706
C GLQGF +FH +LMERLS +YGKKSKLEF+IYPAPQ+ST+VVEPYNS
Sbjct: 125 NCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKKSKLEFSIYPAPQISTSVVEPYNS 184
Query: 707 ILTTHTTLEHSDCAFMVDNE 766
ILTTHTTLEHSDC+FMVDNE
Sbjct: 185 ILTTHTTLEHSDCSFMVDNE 204
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 322 bits (790), Expect = 3e-88
Identities = 145/200 (72%), Positives = 165/200 (82%)
Frame = +2
Query: 167 HVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVF 346
HVGQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET GKHVPR +F
Sbjct: 14 HVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLF 73
Query: 347 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 526
VDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR+++LA+
Sbjct: 74 VDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAE 133
Query: 527 QCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 706
C GLQGF+IFH LLMERLS +YGKK KLEFAIYPAPQVST++VEPYNS
Sbjct: 134 NCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNS 193
Query: 707 ILTTHTTLEHSDCAFMVDNE 766
IL THTTLEHSDC FMVDNE
Sbjct: 194 ILMTHTTLEHSDCTFMVDNE 213
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 300 bits (736), Expect = 1e-81
Identities = 138/208 (66%), Positives = 163/208 (78%)
Frame = +2
Query: 143 KCVSASLXHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAG 322
+CVS H+GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+ G
Sbjct: 7 ECVSI---HIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNG 62
Query: 323 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 502
KHVPRA++VDLEPTV+DE+R G Y LFHP+Q+I GKEDAANNYARGHYTIGKE++D+VL
Sbjct: 63 KHVPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVL 122
Query: 503 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVST 682
DRIRK + C GLQGFL+FH LLMERLSV++GKKSKLEF++YPAPQVST
Sbjct: 123 DRIRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLEFSVYPAPQVST 182
Query: 683 AVVEPYNSILTTHTTLEHSDCAFMVDNE 766
+VVEPYNSILTTHTTLE SDC+FMVDNE
Sbjct: 183 SVVEPYNSILTTHTTLELSDCSFMVDNE 210
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 286 bits (701), Expect = 2e-77
Identities = 129/185 (69%), Positives = 150/185 (81%)
Frame = +2
Query: 212 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGT 391
++CLEHGIQPDG D T ++ NTFF+ET GKHVPR +FVDLEPTVVDEVRTGT
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGT 60
Query: 392 YRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXX 571
YR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR+++LA+ C GLQGF+IFH
Sbjct: 61 YRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFG 120
Query: 572 XXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAF 751
LLMERLS +YGKK KLEFAIYPAPQVST++VEPYNSIL THTTLEHSDC F
Sbjct: 121 GGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLEHSDCTF 180
Query: 752 MVDNE 766
MVDNE
Sbjct: 181 MVDNE 185
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 177 bits (430), Expect = 1e-44
Identities = 85/198 (42%), Positives = 120/198 (60%)
Frame = +2
Query: 173 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 352
GQ G QIG WE+ EHGIQPDG + + + N +++E GK+VPRAV VD
Sbjct: 10 GQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQL--ERINVYYNEANGGKYVPRAVLVD 67
Query: 353 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 532
LEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD +RK A+ C
Sbjct: 68 LEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAEGC 127
Query: 533 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 712
LQGF + H LL+ ++ +Y + F++ P+P+VS VVEPYN+ L
Sbjct: 128 DCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVVEPYNATL 187
Query: 713 TTHTTLEHSDCAFMVDNE 766
+ H +E++D F +DNE
Sbjct: 188 SVHQLVENTDETFCIDNE 205
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 174 bits (424), Expect = 7e-44
Identities = 84/198 (42%), Positives = 121/198 (61%)
Frame = +2
Query: 173 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 352
GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK+VPRAV VD
Sbjct: 10 GQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQL--ERIDVYYNEANNGKYVPRAVLVD 67
Query: 353 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 532
LEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD IRK A+ C
Sbjct: 68 LEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAEGC 127
Query: 533 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 712
LQGF + H LL+ ++ +Y + F++ P+P+VS VVEPYN+ L
Sbjct: 128 DCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVVEPYNATL 187
Query: 713 TTHTTLEHSDCAFMVDNE 766
+ H +E++D + +DNE
Sbjct: 188 SVHQLVENTDETYCIDNE 205
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 174 bits (424), Expect = 7e-44
Identities = 84/198 (42%), Positives = 120/198 (60%)
Frame = +2
Query: 173 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 352
GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K+VPRAV VD
Sbjct: 10 GQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNKYVPRAVLVD 67
Query: 353 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 532
LEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD +RK A+
Sbjct: 68 LEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAEST 127
Query: 533 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 712
LQGF + H LL+ ++ +Y + F++ P+P+VS VVEPYN+ L
Sbjct: 128 DCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATL 187
Query: 713 TTHTTLEHSDCAFMVDNE 766
+ H +E++D F +DNE
Sbjct: 188 SVHQLVENTDSTFCIDNE 205
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 174 bits (424), Expect = 7e-44
Identities = 84/198 (42%), Positives = 120/198 (60%)
Frame = +2
Query: 173 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 352
GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K+VPRAV VD
Sbjct: 10 GQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNKYVPRAVLVD 67
Query: 353 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 532
LEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD +RK A+
Sbjct: 68 LEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAEST 127
Query: 533 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 712
LQGF + H LL+ ++ +Y + F++ P+P+VS VVEPYN+ L
Sbjct: 128 DCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATL 187
Query: 713 TTHTTLEHSDCAFMVDNE 766
+ H +E++D F +DNE
Sbjct: 188 SVHQLVENTDSTFCIDNE 205
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 173 bits (421), Expect = 2e-43
Identities = 83/198 (41%), Positives = 121/198 (61%)
Frame = +2
Query: 173 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 352
GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK+VPRAV VD
Sbjct: 10 GQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQL--ERIDVYYNEANNGKYVPRAVLVD 67
Query: 353 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 532
LEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD IRK A+ C
Sbjct: 68 LEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAEGC 127
Query: 533 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 712
LQGF + H LL+ ++ ++ + F++ P+P+VS VVEPYN+ L
Sbjct: 128 DCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMSSFSVVPSPKVSDTVVEPYNATL 187
Query: 713 TTHTTLEHSDCAFMVDNE 766
+ H +E++D + +DNE
Sbjct: 188 SVHQLVENTDETYCIDNE 205
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 172 bits (419), Expect = 3e-43
Identities = 83/198 (41%), Positives = 117/198 (59%)
Frame = +2
Query: 173 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 352
GQ G QIG WE+ EHGI P G D + + N +++E GK+VPRA VD
Sbjct: 10 GQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQL--ERINVYYNEASGGKYVPRACLVD 67
Query: 353 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 532
LEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD +RK A+ C
Sbjct: 68 LEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESC 127
Query: 533 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 712
LQGF + H LL+ ++ +Y + + F++ P+P+VS VVEPYN+ L
Sbjct: 128 DCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIMMTFSVVPSPKVSDTVVEPYNATL 187
Query: 713 TTHTTLEHSDCAFMVDNE 766
+ H +E++D F +DNE
Sbjct: 188 SVHQLVENTDETFCIDNE 205
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 148 bits (358), Expect = 7e-36
Identities = 77/199 (38%), Positives = 112/199 (56%)
Frame = +2
Query: 170 VGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFV 349
VGQ G QIG WE EHG+Q DG D G + +++ E K+VPRA+ V
Sbjct: 9 VGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRKYVPRAILV 66
Query: 350 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQ 529
DL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL IR+ A+
Sbjct: 67 DLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREAEA 126
Query: 530 CTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSI 709
L+GF + H LL+ +L +Y K+ +I P+ +VS VVEPYN+I
Sbjct: 127 ADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTVVEPYNAI 186
Query: 710 LTTHTTLEHSDCAFMVDNE 766
L+ +++ D F +DNE
Sbjct: 187 LSMPHLMDNCDENFCIDNE 205
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 148 bits (358), Expect = 7e-36
Identities = 77/199 (38%), Positives = 112/199 (56%)
Frame = +2
Query: 170 VGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFV 349
VGQ G QIG WE EHG+Q DG D G + +++ E K+VPRA+ V
Sbjct: 9 VGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRKYVPRAILV 66
Query: 350 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQ 529
DL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL IR+ A+
Sbjct: 67 DLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREAEA 126
Query: 530 CTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSI 709
L+GF + H LL+ +L +Y K+ +I P+ +VS VVEPYN+I
Sbjct: 127 ADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTVVEPYNAI 186
Query: 710 LTTHTTLEHSDCAFMVDNE 766
L+ +++ D F +DNE
Sbjct: 187 LSMPHLMDNCDENFCIDNE 205
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 99.1 bits (236), Expect = 4e-21
Identities = 63/203 (31%), Positives = 100/203 (49%), Gaps = 4/203 (1%)
Frame = +2
Query: 167 HVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVF 346
HVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPRAV
Sbjct: 11 HVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPRAVL 67
Query: 347 VDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDRIRK 517
VDLEP V++ +++ + LF+ + + A NN+A G Y G+E+ + ++D I +
Sbjct: 68 VDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDIIIR 126
Query: 518 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVST-AVVE 694
A+ L G L H LL+ERL + KK ++++ ST VV
Sbjct: 127 EAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDVVVH 186
Query: 695 PYNSILTTHTTLEHSDCAFMVDN 763
PYN +L+ +E+ D ++DN
Sbjct: 187 PYNWVLSMQRLIENPDHVVVLDN 209
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 99.1 bits (236), Expect = 4e-21
Identities = 63/203 (31%), Positives = 100/203 (49%), Gaps = 4/203 (1%)
Frame = +2
Query: 167 HVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVF 346
HVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPRAV
Sbjct: 11 HVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPRAVL 67
Query: 347 VDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDRIRK 517
VDLEP V++ +++ + LF+ + + A NN+A G Y G+E+ + ++D I +
Sbjct: 68 VDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDIIIR 126
Query: 518 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVST-AVVE 694
A+ L G L H LL+ERL + KK ++++ ST VV
Sbjct: 127 EAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDVVVH 186
Query: 695 PYNSILTTHTTLEHSDCAFMVDN 763
PYN +L+ +E+ D ++DN
Sbjct: 187 PYNWVLSMQRLIENPDHVVVLDN 209
>AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical
protein Y66D12A.12 protein.
Length = 343
Score = 31.9 bits (69), Expect = 0.70
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +3
Query: 174 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELAST 329
A P MP+ S + S++SS M + P+ PS ++T+L+++ + E AST
Sbjct: 189 ATPALLPFMPSSSTFSASSSSSEMEQTPE--PSSLDTVLTSMMNNNEEAAST 238
>AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear receptor
NHR-80 protein.
Length = 486
Score = 29.1 bits (62), Expect = 4.9
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +2
Query: 188 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 367
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 368 VDE 376
DE
Sbjct: 116 ADE 118
>AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform b protein.
Length = 504
Score = 29.1 bits (62), Expect = 4.9
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +2
Query: 188 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 367
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 81 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 133
Query: 368 VDE 376
DE
Sbjct: 134 ADE 136
>AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform a protein.
Length = 486
Score = 29.1 bits (62), Expect = 4.9
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +2
Query: 188 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 367
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 368 VDE 376
DE
Sbjct: 116 ADE 118
>Z70309-13|CAL36512.2| 383|Caenorhabditis elegans Hypothetical
protein R102.4c protein.
Length = 383
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 719 HTTLEHSDCAFMVDNEXSMTSAAVFNDA 802
H L+H+D D+E + T A + NDA
Sbjct: 277 HIALDHADATIRADHERAKTLARMINDA 304
>Z70309-12|CAB54293.3| 413|Caenorhabditis elegans Hypothetical
protein R102.4b protein.
Length = 413
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 719 HTTLEHSDCAFMVDNEXSMTSAAVFNDA 802
H L+H+D D+E + T A + NDA
Sbjct: 307 HIALDHADATIRADHERAKTLARMINDA 334
>Z70309-11|CAB54291.3| 408|Caenorhabditis elegans Hypothetical
protein R102.4a protein.
Length = 408
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 719 HTTLEHSDCAFMVDNEXSMTSAAVFNDA 802
H L+H+D D+E + T A + NDA
Sbjct: 302 HIALDHADATIRADHERAKTLARMINDA 329
>AL110485-19|CAB60367.2| 529|Caenorhabditis elegans Hypothetical
protein Y46G5A.24 protein.
Length = 529
Score = 28.3 bits (60), Expect = 8.6
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = -3
Query: 679 GNLRRGVDGELQFRLLAVVNGETLHQ*GSEPRAGTSTEGVEDQESLQTGTLVSELADSVQ 500
GNL V +L+F + N E HQ EP + EG+E+ + G L+ + S +
Sbjct: 435 GNLAGVVKADLKFGNHLIWNRENPHQICGEPIFVPNPEGIEEDD----GILIVPIMSSSE 490
Query: 499 NQI 491
Q+
Sbjct: 491 KQV 493
>AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical
protein F38A1.7 protein.
Length = 475
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -3
Query: 436 FLTSNKLFWMKQLSVCASADLINNSRFKIDED 341
FL K F K ++VC S LI R+ DED
Sbjct: 232 FLNFQKFFNNKDVTVCGSVCLILEKRYPNDED 263
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,354,502
Number of Sequences: 27780
Number of extensions: 391916
Number of successful extensions: 958
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 936
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2496624284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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