Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_I22
(868 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0548 - 18469636-18470037,18471164-18472705,18474052-184744... 231 4e-61
09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540 231 4e-61
08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201 231 4e-61
04_01_0042 + 473912-474058,474208-474349,474442-476264 229 3e-60
06_03_1404 - 29928792-29929040,29929147-29929551,29930130-299302... 171 6e-43
12_02_0522 - 19960092-19960595,19962737-19962880,19963042-199631... 144 6e-35
08_02_1073 - 24117834-24118037,24118122-24118211,24118299-241184... 136 3e-32
09_04_0497 - 18096299-18096496,18096586-18096675,18096809-180969... 128 6e-30
08_02_0846 - 21811156-21811833,21811960-21812055,21812157-218122... 29 3.6
05_03_0235 - 10747649-10748118,10748226-10748314,10748477-107485... 29 3.6
03_05_0373 + 23581812-23583293 29 3.6
>09_04_0548 -
18469636-18470037,18471164-18472705,18474052-18474474,
18474874-18474999
Length = 830
Score = 231 bits (566), Expect = 4e-61
Identities = 115/170 (67%), Positives = 136/170 (80%), Gaps = 1/170 (0%)
Frame = +3
Query: 318 NKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTK 497
+KIR+ESLTD SKLD+ EL+I I+P+K TL+IID+G+GMTK+DLVNNLGTIA+SGTK
Sbjct: 45 DKIRFESLTDKSKLDAQPELFIHIVPDKASNTLSIIDSGVGMTKSDLVNNLGTIARSGTK 104
Query: 498 AFMEALQAGADISMIGQFGVGFYSSYLVADRVTVHSKHNDDEQYVWESSAGGSFTV-RPD 674
FMEAL AGAD+SMIGQFGVGFYS+YLVA+RV V +KHNDDEQYVWES AGGSFTV R
Sbjct: 105 EFMEALAAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDT 164
Query: 675 SGEPLGSRYKRSSFTSKXDLAEFMEEXKSKRSVKKHSQFIGYPIKLMVEK 824
SGE LG R + + K D E++EE + K VKKHS+FI YPI L EK
Sbjct: 165 SGEQLG-RGTKITLYLKDDQLEYLEERRLKDLVKKHSEFISYPISLWTEK 213
Score = 52.0 bits (119), Expect = 6e-07
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +2
Query: 245 IINTFYSNKEIFLRELISNSSDALEQ 322
IINTFYSNKEIFLRELISNSSDAL++
Sbjct: 21 IINTFYSNKEIFLRELISNSSDALDK 46
>09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540
Length = 699
Score = 231 bits (566), Expect = 4e-61
Identities = 115/170 (67%), Positives = 136/170 (80%), Gaps = 1/170 (0%)
Frame = +3
Query: 318 NKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTK 497
+KIR+ESLTD SKLD+ EL+I I+P+K TL+IID+G+GMTK+DLVNNLGTIA+SGTK
Sbjct: 45 DKIRFESLTDKSKLDAQPELFIHIVPDKASNTLSIIDSGVGMTKSDLVNNLGTIARSGTK 104
Query: 498 AFMEALQAGADISMIGQFGVGFYSSYLVADRVTVHSKHNDDEQYVWESSAGGSFTV-RPD 674
FMEAL AGAD+SMIGQFGVGFYS+YLVA+RV V +KHNDDEQYVWES AGGSFTV R
Sbjct: 105 EFMEALAAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDT 164
Query: 675 SGEPLGSRYKRSSFTSKXDLAEFMEEXKSKRSVKKHSQFIGYPIKLMVEK 824
SGE LG R + + K D E++EE + K VKKHS+FI YPI L EK
Sbjct: 165 SGEQLG-RGTKITLYLKDDQLEYLEERRLKDLVKKHSEFISYPISLWTEK 213
Score = 52.0 bits (119), Expect = 6e-07
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +2
Query: 245 IINTFYSNKEIFLRELISNSSDALEQ 322
IINTFYSNKEIFLRELISNSSDAL++
Sbjct: 21 IINTFYSNKEIFLRELISNSSDALDK 46
>08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201
Length = 699
Score = 231 bits (566), Expect = 4e-61
Identities = 115/170 (67%), Positives = 136/170 (80%), Gaps = 1/170 (0%)
Frame = +3
Query: 318 NKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTK 497
+KIR+ESLTD SKLD+ EL+I I+P+K TL+IID+GIGMTK+DLVNNLGTIA+SGTK
Sbjct: 45 DKIRFESLTDKSKLDAQPELFIHIVPDKASNTLSIIDSGIGMTKSDLVNNLGTIARSGTK 104
Query: 498 AFMEALQAGADISMIGQFGVGFYSSYLVADRVTVHSKHNDDEQYVWESSAGGSFTV-RPD 674
FMEAL AGAD+SMIGQFGVGFYS+YLVA+RV V +KHNDDEQYVWES AGGSFTV R
Sbjct: 105 EFMEALAAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDT 164
Query: 675 SGEPLGSRYKRSSFTSKXDLAEFMEEXKSKRSVKKHSQFIGYPIKLMVEK 824
SGE LG R + + K D E++EE + K +KKHS+FI YPI L EK
Sbjct: 165 SGEQLG-RGTKITLYLKDDQLEYLEERRLKDLIKKHSEFISYPISLWTEK 213
Score = 52.0 bits (119), Expect = 6e-07
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +2
Query: 245 IINTFYSNKEIFLRELISNSSDALEQ 322
IINTFYSNKEIFLRELISNSSDAL++
Sbjct: 21 IINTFYSNKEIFLRELISNSSDALDK 46
>04_01_0042 + 473912-474058,474208-474349,474442-476264
Length = 703
Score = 229 bits (559), Expect = 3e-60
Identities = 114/170 (67%), Positives = 137/170 (80%), Gaps = 1/170 (0%)
Frame = +3
Query: 318 NKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTK 497
+KIR+ESLTD SKLD+ EL+I+++P K TL+IID+G+GMTK+DLVNNLGTIA+SGTK
Sbjct: 52 DKIRFESLTDKSKLDAQPELFIRLVPYKPSKTLSIIDSGVGMTKSDLVNNLGTIARSGTK 111
Query: 498 AFMEALQAGADISMIGQFGVGFYSSYLVADRVTVHSKHNDDEQYVWESSAGGSFTVRPD- 674
FMEALQAGAD+SMIGQFGVGFYS+YLVA++V V +KHNDDEQYVWES AGGSFTV D
Sbjct: 112 EFMEALQAGADVSMIGQFGVGFYSAYLVAEKVVVTTKHNDDEQYVWESQAGGSFTVTLDT 171
Query: 675 SGEPLGSRYKRSSFTSKXDLAEFMEEXKSKRSVKKHSQFIGYPIKLMVEK 824
+GE LG K + F K D E++EE + K VKKHS+FI YPI L EK
Sbjct: 172 AGERLGRGTKITLFL-KDDQLEYLEERRLKDLVKKHSEFISYPIYLWSEK 220
Score = 52.0 bits (119), Expect = 6e-07
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +2
Query: 245 IINTFYSNKEIFLRELISNSSDALEQ 322
IINTFYSNKEIFLRELISNSSDAL++
Sbjct: 28 IINTFYSNKEIFLRELISNSSDALDK 53
>06_03_1404 -
29928792-29929040,29929147-29929551,29930130-29930280,
29930363-29930501,29930578-29930743,29930826-29931041,
29931142-29931323,29931412-29931538,29931974-29932112,
29932227-29932353,29932501-29932612,29932704-29932784,
29933330-29933483,29933569-29933689,29934003-29934045,
29934356-29934460
Length = 838
Score = 171 bits (416), Expect = 6e-43
Identities = 92/172 (53%), Positives = 117/172 (68%), Gaps = 3/172 (1%)
Frame = +3
Query: 318 NKIRYESLTDPSKLDSGK--ELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSG 491
+KIR+ +LTD L G +L I+I +K + L+I D GIGMTK DL+ NLGTIAKSG
Sbjct: 144 DKIRFLALTDKEVLGEGDTAKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSG 203
Query: 492 TKAFMEALQAGADISMIGQFGVGFYSSYLVADRVTVHSKHNDDEQYVWESSAGGSFTVRP 671
T AF+E +Q G D+++IGQFGVGFYS YLVAD V V SKHNDD+Q+VWES A GSF +
Sbjct: 204 TSAFVEKMQTGGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQHVWESKADGSFAISE 263
Query: 672 DS-GEPLGSRYKRSSFTSKXDLAEFMEEXKSKRSVKKHSQFIGYPIKLMVEK 824
D+ EPLG R + + E++EE K K VKK+S+FI +PI L K
Sbjct: 264 DTWNEPLG-RGTEIRLHLRDEAKEYVEEDKLKDLVKKYSEFINFPIYLWATK 314
Score = 45.6 bits (103), Expect = 5e-05
Identities = 20/26 (76%), Positives = 25/26 (96%)
Frame = +2
Query: 245 IINTFYSNKEIFLRELISNSSDALEQ 322
IIN+ YSNK+IFLRELISN+SDAL++
Sbjct: 120 IINSLYSNKDIFLRELISNASDALDK 145
>12_02_0522 -
19960092-19960595,19962737-19962880,19963042-19963131,
19963215-19963320,19963400-19963574,19963849-19963951,
19964382-19964636,19964726-19964803,19964908-19965000,
19965091-19965222,19965898-19966002,19966127-19966201,
19966284-19966340,19966419-19966532,19966613-19966756,
19966886-19966969,19967071-19967164,19967244-19967369,
19967507-19967580,19967672-19967875,19968234-19968388,
19968860-19968947,19969505-19969730,19970235-19970286,
19970766-19970958,19973221-19973314,19973744-19973788,
19974874-19974896
Length = 1210
Score = 144 bits (350), Expect = 6e-35
Identities = 80/176 (45%), Positives = 113/176 (64%), Gaps = 7/176 (3%)
Frame = +3
Query: 318 NKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTK 497
+K+RY S+TDP + G L I+I +K G +TI DTGIGMT+ +LV++LGTIA SGT
Sbjct: 392 DKLRYLSVTDPDLIKDGAGLDIRIQTDKENGIITITDTGIGMTRQELVDSLGTIASSGTA 451
Query: 498 AFMEAL----QAGADISMIGQFGVGFYSSYLVADRVTVHSKH-NDDEQYVWESSA-GGSF 659
F++AL +AG D ++IGQFGVGFYS++LV+D+V V +K D+QYVWE A S+
Sbjct: 452 KFLKALKESQEAGVDSNLIGQFGVGFYSAFLVSDKVAVSTKSPKSDKQYVWEGEAESSSY 511
Query: 660 TVRPDSG-EPLGSRYKRSSFTSKXDLAEFMEEXKSKRSVKKHSQFIGYPIKLMVEK 824
T+R ++ E L R R + K + F K ++ VK +SQF+ +PI EK
Sbjct: 512 TIREETDPEKLLPRGTRLTLYLKREDKGFAHPEKIQKLVKNYSQFVSFPIYTWQEK 567
Score = 43.6 bits (98), Expect = 2e-04
Identities = 17/26 (65%), Positives = 25/26 (96%)
Frame = +2
Query: 245 IINTFYSNKEIFLRELISNSSDALEQ 322
I+++ YSNKE+FLREL+SN+SDAL++
Sbjct: 368 IVHSLYSNKEVFLRELVSNASDALDK 393
>08_02_1073 -
24117834-24118037,24118122-24118211,24118299-24118404,
24118477-24118648,24118737-24118839,24118927-24119181,
24119259-24119336,24119449-24119541,24119660-24119800,
24119882-24119986,24120135-24120212,24120297-24120341,
24120463-24120579,24120685-24120828,24120934-24121017,
24121139-24121232,24121322-24121447,24121585-24121658,
24121870-24122098,24123124-24123611,24123702-24123749,
24123841-24124077,24124368-24124404,24125011-24125018
Length = 1051
Score = 136 bits (328), Expect = 3e-32
Identities = 78/178 (43%), Positives = 110/178 (61%), Gaps = 8/178 (4%)
Frame = +3
Query: 318 NKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTK 497
+K+R+ +TD S L G EL I+I P+ + GT+TI DTGIGMTK +L + LGTIA+SGT
Sbjct: 381 DKLRFLGVTDSSLLADGGELEIRIKPDPDAGTITITDTGIGMTKDELKDCLGTIAQSGTS 440
Query: 498 AFMEALQ----AGADISMIGQFGVGFYSSYLVADRVTVHSKH-NDDEQYVWESSAGGSFT 662
F++AL+ GAD +IGQFGVGFYS++LVA++V V +K D+QYVWE A S
Sbjct: 441 KFLKALKENKDLGADNGLIGQFGVGFYSAFLVAEKVVVSTKSPKSDKQYVWEGVADSSSY 500
Query: 663 VRPDSGEPLGSRYKRSSFT---SKXDLAEFMEEXKSKRSVKKHSQFIGYPIKLMVEKN 827
V + +P + + T D EF + + + VK +SQF+ +PI EK+
Sbjct: 501 VIKEETDPEKMLTRGTQITLVLRPDDKFEFADPGRIQGLVKNYSQFVSFPIYTWQEKS 558
Score = 41.5 bits (93), Expect = 8e-04
Identities = 16/26 (61%), Positives = 25/26 (96%)
Frame = +2
Query: 245 IINTFYSNKEIFLRELISNSSDALEQ 322
I+++ YS+KE+FLREL+SN+SDAL++
Sbjct: 357 IVHSLYSHKEVFLRELVSNASDALDK 382
>09_04_0497 -
18096299-18096496,18096586-18096675,18096809-18096914,
18097005-18097179,18097263-18097365,18097458-18097712,
18097791-18097868,18097986-18098078,18098179-18098319,
18098406-18098510,18098658-18098738,18098825-18098866,
18098966-18099082,18099208-18099351,18099485-18099568,
18099683-18099803,18099863-18099988,18100106-18100179,
18100388-18100657
Length = 800
Score = 128 bits (309), Expect = 6e-30
Identities = 80/187 (42%), Positives = 112/187 (59%), Gaps = 17/187 (9%)
Frame = +3
Query: 318 NKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTII---------DTGIGMTKADLVNNL 470
+K+R+ S+TD S L G EL I+I P+ GT+TI DTGIGMTK +L + L
Sbjct: 122 DKLRFLSVTDSSVLSDGGELEIRIKPDPEAGTITITRSHCFASYSDTGIGMTKDELKDCL 181
Query: 471 GTIAKSGTKAFMEALQA----GADISMIGQFGVGFYSSYLVADRVTVHSKH-NDDEQYVW 635
GTIA+SGT F++AL+ GAD +IGQFGVGFYS++LVA++V V +K D+QYVW
Sbjct: 182 GTIAQSGTSKFLKALKENKDLGADNGLIGQFGVGFYSAFLVAEKVVVSTKSPKADKQYVW 241
Query: 636 ESSAGGSFTVRPDSGEP---LGSRYKRSSFTSKXDLAEFMEEXKSKRSVKKHSQFIGYPI 806
E+ A S V + +P L + + F D EF + + + VK +SQF+ +PI
Sbjct: 242 EAMADSSSYVIKEETDPEKMLTRGTQITLFLRDDDKYEFADPGRIQGLVKNYSQFVSFPI 301
Query: 807 KLMVEKN 827
EK+
Sbjct: 302 YTWQEKS 308
Score = 41.5 bits (93), Expect = 8e-04
Identities = 16/26 (61%), Positives = 25/26 (96%)
Frame = +2
Query: 245 IINTFYSNKEIFLRELISNSSDALEQ 322
I+++ YS+KE+FLREL+SN+SDAL++
Sbjct: 98 IVHSLYSHKEVFLRELVSNASDALDK 123
>08_02_0846 -
21811156-21811833,21811960-21812055,21812157-21812267,
21812367-21812743,21814699-21814734,21815236-21815839
Length = 633
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Frame = +3
Query: 423 IDTGIGMTKADLVNNLGT----IAKSGTKAFMEALQAG-ADISMIGQFGVG 560
++ GM+ A+L+ + I +SGTK E L+AG + ++G+ GVG
Sbjct: 100 VECAYGMSPAELLAKVAQFDALIVRSGTKVTREVLEAGRGRLRVVGRAGVG 150
>05_03_0235 -
10747649-10748118,10748226-10748314,10748477-10748574,
10748934-10749046,10749107-10749200,10749557-10749589,
10749734-10749851,10750110-10750210,10751036-10751233,
10751337-10751471,10751752-10751830,10753650-10753738,
10753835-10753987,10754100-10754285
Length = 651
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = +2
Query: 371 RAVHQDHSQQERGHSYDHRYRYWYDQGRFGEQFGNHREIWY*SFHGGSSSRCRHQH 538
RA + + H +DHR+R+ G G+H +HGG R RH H
Sbjct: 525 RARRRHQKGRHHRHHHDHRHRH-------GHSHGDHHH----HYHGGHHQRRRHHH 569
>03_05_0373 + 23581812-23583293
Length = 493
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +3
Query: 552 GVGFYSSYLVADRVTVHSKHNDDEQYVWESSAGGSFTVRPDSGEPLGSRYKRSS 713
G G + +VAD + + H D + VW + AG R P + Y RSS
Sbjct: 144 GSGLVKAIVVADDGRIFTGHQDGKVRVWRADAGDPAVHRRVGSLPRLADYVRSS 197
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,715,190
Number of Sequences: 37544
Number of extensions: 467559
Number of successful extensions: 1100
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1088
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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