Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_I17
(877 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81143-4|CAB03516.1| 189|Caenorhabditis elegans Hypothetical pr... 74 2e-13
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 31 1.4
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 31 1.4
U40409-3|ABO16455.1| 681|Caenorhabditis elegans Related to yeas... 30 1.9
U40409-2|AAA81388.3| 759|Caenorhabditis elegans Related to yeas... 30 1.9
U40409-1|ABO16456.1| 807|Caenorhabditis elegans Related to yeas... 30 1.9
U37429-12|AAA79353.1| 274|Caenorhabditis elegans Alkylguanine d... 30 1.9
Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical p... 29 4.4
Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical p... 29 4.4
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 4.4
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 4.4
AF016684-13|AAB66203.1| 470|Caenorhabditis elegans Hypothetical... 29 4.4
Z93385-4|CAB07640.1| 806|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical pr... 28 7.6
X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomera... 28 7.6
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 28 7.6
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein. 28 7.6
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 28 7.6
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 28 7.6
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 28 7.6
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge... 28 7.6
>Z81143-4|CAB03516.1| 189|Caenorhabditis elegans Hypothetical
protein ZK265.6 protein.
Length = 189
Score = 73.7 bits (173), Expect = 2e-13
Identities = 47/149 (31%), Positives = 73/149 (48%), Gaps = 10/149 (6%)
Frame = +1
Query: 229 NKKVQGNVQCSIVKEAWNNKKTSARNLREMGLVSDPNKTIKIPNFKQTQIQRAK-QMVNQ 405
NKK I+K W+ KT N+R+MG+ +PN + I ++ I V+
Sbjct: 28 NKKKLSKSAVPIIKYTWDETKTPRENVRDMGIAFNPNDAVPIAEHRKEIIDAEPIDGVSI 87
Query: 406 IDSDEEVETVVRLPPKKEVAE---------KLEKQAKAPRKRKFMLPKGQVEFITYLLDK 558
+ E + R +K+ A K E++A+A + RKF L + E Y+L +
Sbjct: 88 VVPKPEKKVTGRKKNEKQAAHIISNLEQQVKEEEEARAGQDRKFRLFHRETELCVYMLAR 147
Query: 559 YGNDYKAMERDKKNYYQETWKQLRSKIKT 645
+G D++AM RD KN +Q T KQ KI+T
Sbjct: 148 HGEDFQAMTRDPKNLWQYTPKQWAKKIRT 176
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +1
Query: 388 KQMVNQIDSDEEVETVVRLPPKKEVAEKLEKQAKAPRKRKFMLP 519
++ V+Q+D E++E V + PK EV + ++ + KR +LP
Sbjct: 1859 QKSVDQVDPVEQLEPVEPVEPKLEVKQLKDEATEEEEKRTIILP 1902
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +1
Query: 388 KQMVNQIDSDEEVETVVRLPPKKEVAEKLEKQAKAPRKRKFMLP 519
++ V+Q+D E++E V + PK EV + ++ + KR +LP
Sbjct: 1859 QKSVDQVDPVEQLEPVEPVEPKLEVKQLKDEATEEEEKRTIILP 1902
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +1
Query: 388 KQMVNQIDSDEEVETVVRLPPKKEVAEKLEKQAKAPRKRKFMLP 519
++ V+Q+D E++E V + PK EV + ++ + KR +LP
Sbjct: 1859 QKSVDQVDPVEQLEPVEPVEPKLEVKQLKDEATEEEEKRTIILP 1902
>U40409-3|ABO16455.1| 681|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 41, isoform b
protein.
Length = 681
Score = 30.3 bits (65), Expect = 1.9
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Frame = +1
Query: 349 KIPNFKQTQIQRAKQMVNQIDSDEEVETVVRLPPK---KEVAEKLEKQAK--APRKRKFM 513
KI + Q+ +++++ + E + V+L + K++ L K A + RK
Sbjct: 494 KIGRQPKLQLAYLTKLMSRNEGTEFADKAVQLYAEYDQKKLLPFLRKNANYNVNKARKLC 553
Query: 514 LPKGQVEFITYLLDKYGNDYKAMERDKKNY 603
KG +E YLL K GN Y A++ + Y
Sbjct: 554 SDKGYIEETIYLLAKSGNHYDAVKMMVREY 583
>U40409-2|AAA81388.3| 759|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 41, isoform a
protein.
Length = 759
Score = 30.3 bits (65), Expect = 1.9
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Frame = +1
Query: 349 KIPNFKQTQIQRAKQMVNQIDSDEEVETVVRLPPK---KEVAEKLEKQAK--APRKRKFM 513
KI + Q+ +++++ + E + V+L + K++ L K A + RK
Sbjct: 494 KIGRQPKLQLAYLTKLMSRNEGTEFADKAVQLYAEYDQKKLLPFLRKNANYNVNKARKLC 553
Query: 514 LPKGQVEFITYLLDKYGNDYKAMERDKKNY 603
KG +E YLL K GN Y A++ + Y
Sbjct: 554 SDKGYIEETIYLLAKSGNHYDAVKMMVREY 583
>U40409-1|ABO16456.1| 807|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 41, isoform c
protein.
Length = 807
Score = 30.3 bits (65), Expect = 1.9
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Frame = +1
Query: 349 KIPNFKQTQIQRAKQMVNQIDSDEEVETVVRLPPK---KEVAEKLEKQAK--APRKRKFM 513
KI + Q+ +++++ + E + V+L + K++ L K A + RK
Sbjct: 542 KIGRQPKLQLAYLTKLMSRNEGTEFADKAVQLYAEYDQKKLLPFLRKNANYNVNKARKLC 601
Query: 514 LPKGQVEFITYLLDKYGNDYKAMERDKKNY 603
KG +E YLL K GN Y A++ + Y
Sbjct: 602 SDKGYIEETIYLLAKSGNHYDAVKMMVREY 631
>U37429-12|AAA79353.1| 274|Caenorhabditis elegans Alkylguanine dna
alkyltransferaseprotein 2 protein.
Length = 274
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 436 VRLPPKKEVAEKLEKQAKAPRKRKFMLPKGQ 528
V+ PPKK + +K++K +AP+ K KG+
Sbjct: 199 VKSPPKKMIIQKIQKHQEAPKPAKVPKIKGE 229
>Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical
protein F26C11.3 protein.
Length = 1317
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 532 EFITYLLDKYGNDYKAMERDKKNYYQE 612
E +TYL KYG D+K D+ NY E
Sbjct: 45 ESVTYLNTKYGQDWKKAWLDRVNYVTE 71
>Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 29.1 bits (62), Expect = 4.4
Identities = 24/85 (28%), Positives = 36/85 (42%)
Frame = +1
Query: 235 KVQGNVQCSIVKEAWNNKKTSARNLREMGLVSDPNKTIKIPNFKQTQIQRAKQMVNQIDS 414
KVQG KEAW + L E+ D K +K+ K + R + +
Sbjct: 334 KVQGEHLEKQRKEAWEKVEQLQEMLGELEAELDRQKELKLQLEKDMEDLRKEHEGQMAEL 393
Query: 415 DEEVETVVRLPPKKEVAEKLEKQAK 489
++ +E V +KE E+LEK K
Sbjct: 394 EKRLEKVSE--KEKEAIEQLEKIQK 416
>Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 29.1 bits (62), Expect = 4.4
Identities = 24/85 (28%), Positives = 36/85 (42%)
Frame = +1
Query: 235 KVQGNVQCSIVKEAWNNKKTSARNLREMGLVSDPNKTIKIPNFKQTQIQRAKQMVNQIDS 414
KVQG KEAW + L E+ D K +K+ K + R + +
Sbjct: 334 KVQGEHLEKQRKEAWEKVEQLQEMLGELEAELDRQKELKLQLEKDMEDLRKEHEGQMAEL 393
Query: 415 DEEVETVVRLPPKKEVAEKLEKQAK 489
++ +E V +KE E+LEK K
Sbjct: 394 EKRLEKVSE--KEKEAIEQLEKIQK 416
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 29.1 bits (62), Expect = 4.4
Identities = 24/94 (25%), Positives = 46/94 (48%)
Frame = +1
Query: 223 IGNKKVQGNVQCSIVKEAWNNKKTSARNLREMGLVSDPNKTIKIPNFKQTQIQRAKQMVN 402
+ K Q V ++ +EA + +A+ + + L + IK K +++ AK+
Sbjct: 12982 VNKAKKQKEVDDNLKREA----EVAAKKIADEKLKIEAEANIK----KTAEVEAAKK--- 13030
Query: 403 QIDSDEEVETVVRLPPKKEVAEKLEKQAKAPRKR 504
Q + DE+++ + KK AEKLE + +A K+
Sbjct: 13031 QKEKDEQLKLETEVVSKKSAAEKLELEKQAQIKK 13064
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 29.1 bits (62), Expect = 4.4
Identities = 24/94 (25%), Positives = 46/94 (48%)
Frame = +1
Query: 223 IGNKKVQGNVQCSIVKEAWNNKKTSARNLREMGLVSDPNKTIKIPNFKQTQIQRAKQMVN 402
+ K Q V ++ +EA + +A+ + + L + IK K +++ AK+
Sbjct: 12982 VNKAKKQKEVDDNLKREA----EVAAKKIADEKLKIEAEANIK----KTAEVEAAKK--- 13030
Query: 403 QIDSDEEVETVVRLPPKKEVAEKLEKQAKAPRKR 504
Q + DE+++ + KK AEKLE + +A K+
Sbjct: 13031 QKEKDEQLKLETEVVSKKSAAEKLELEKQAQIKK 13064
>AF016684-13|AAB66203.1| 470|Caenorhabditis elegans Hypothetical
protein F45C12.3 protein.
Length = 470
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/69 (24%), Positives = 33/69 (47%)
Frame = +1
Query: 307 LREMGLVSDPNKTIKIPNFKQTQIQRAKQMVNQIDSDEEVETVVRLPPKKEVAEKLEKQA 486
L E ++ PN+ ++ ++ Q + + + D++++ P + E EKLEK
Sbjct: 268 LEEAEILEKPNEPMESETLERHQQLEKNEEPREYEEDKKLKE----PGEHEETEKLEKPN 323
Query: 487 KAPRKRKFM 513
K +KFM
Sbjct: 324 KLENSKKFM 332
>Z93385-4|CAB07640.1| 806|Caenorhabditis elegans Hypothetical
protein M01E5.5a protein.
Length = 806
Score = 28.3 bits (60), Expect = 7.6
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = +1
Query: 286 KKTSARNLREMGLVSDPNKTIKIPNFKQTQIQRAKQMVNQIDSDEEVETVVR---LPPKK 456
+K+SA+N ++ + SD K K + + K + D DEE E V + P+
Sbjct: 75 RKSSAKNGKKKDVGSDSEDDYKPEKKKSKKNNKKKAQESSEDDDEESEGDVSEEDVKPQI 134
Query: 457 EVAEKLEKQAKAP 495
++LE++ +AP
Sbjct: 135 HSDDELEEEDEAP 147
>Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical
protein R07E5.6 protein.
Length = 443
Score = 28.3 bits (60), Expect = 7.6
Identities = 20/77 (25%), Positives = 40/77 (51%)
Frame = +1
Query: 364 KQTQIQRAKQMVNQIDSDEEVETVVRLPPKKEVAEKLEKQAKAPRKRKFMLPKGQVEFIT 543
K+ + ++AK+ +ID +E++ KKEV E +K+ + KR+ + K + E ++
Sbjct: 255 KKDEDEKAKKEKERIDKEEKI--------KKEVEEAEKKKKEEKEKRRKEVKKNREEQLS 306
Query: 544 YLLDKYGNDYKAMERDK 594
+ ND K + +K
Sbjct: 307 INPEMSRNDKKDVVEEK 323
>X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomerase
protein.
Length = 806
Score = 28.3 bits (60), Expect = 7.6
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = +1
Query: 286 KKTSARNLREMGLVSDPNKTIKIPNFKQTQIQRAKQMVNQIDSDEEVETVVR---LPPKK 456
+K+SA+N ++ + SD K K + + K + D DEE E V + P+
Sbjct: 75 RKSSAKNGKKKDVGSDSEDDYKPEKKKSKKNNKKKAQESSEDDDEESEGDVSEEDVKPQI 134
Query: 457 EVAEKLEKQAKAP 495
++LE++ +AP
Sbjct: 135 HSDDELEEEDEAP 147
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 28.3 bits (60), Expect = 7.6
Identities = 26/105 (24%), Positives = 43/105 (40%)
Frame = +1
Query: 286 KKTSARNLREMGLVSDPNKTIKIPNFKQTQIQRAKQMVNQIDSDEEVETVVRLPPKKEVA 465
KK S+ + V P K K P QT ++ + S E+ PK++
Sbjct: 1671 KKESSPTKKTDDEVKSPTKKEKSP---QTVEEKPASPTKKEKSPEKSVVEEVKSPKEKSP 1727
Query: 466 EKLEKQAKAPRKRKFMLPKGQVEFITYLLDKYGNDYKAMERDKKN 600
EK E++ K+P K++ K E + K + K+ E K+
Sbjct: 1728 EKAEEKPKSPTKKEKSPEKSAAEEVKSPTKKEKSPEKSAEEKPKS 1772
>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
Length = 1359
Score = 28.3 bits (60), Expect = 7.6
Identities = 19/81 (23%), Positives = 41/81 (50%)
Frame = +1
Query: 265 VKEAWNNKKTSARNLREMGLVSDPNKTIKIPNFKQTQIQRAKQMVNQIDSDEEVETVVRL 444
VK++ NK+ S + E SD ++ + K + + + ++ + ++EV+ +
Sbjct: 165 VKKSKKNKEKSVKKRAETSEESDEDEKPSKKSKKGLKKKAKSESESESEDEKEVKKSKK- 223
Query: 445 PPKKEVAEKLEKQAKAPRKRK 507
KK V ++ E + +AP K+K
Sbjct: 224 KSKKVVKKESESEDEAPEKKK 244
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 28.3 bits (60), Expect = 7.6
Identities = 26/105 (24%), Positives = 43/105 (40%)
Frame = +1
Query: 286 KKTSARNLREMGLVSDPNKTIKIPNFKQTQIQRAKQMVNQIDSDEEVETVVRLPPKKEVA 465
KK S+ + V P K K P QT ++ + S E+ PK++
Sbjct: 1671 KKESSPTKKTDDEVKSPTKKEKSP---QTVEEKPASPTKKEKSPEKSVVEEVKSPKEKSP 1727
Query: 466 EKLEKQAKAPRKRKFMLPKGQVEFITYLLDKYGNDYKAMERDKKN 600
EK E++ K+P K++ K E + K + K+ E K+
Sbjct: 1728 EKAEEKPKSPTKKEKSPEKSAAEEVKSPTKKEKSPEKSAEEKPKS 1772
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 28.3 bits (60), Expect = 7.6
Identities = 26/105 (24%), Positives = 43/105 (40%)
Frame = +1
Query: 286 KKTSARNLREMGLVSDPNKTIKIPNFKQTQIQRAKQMVNQIDSDEEVETVVRLPPKKEVA 465
KK S+ + V P K K P QT ++ + S E+ PK++
Sbjct: 1671 KKESSPTKKTDDEVKSPTKKEKSP---QTVEEKPASPTKKEKSPEKSVVEEVKSPKEKSP 1727
Query: 466 EKLEKQAKAPRKRKFMLPKGQVEFITYLLDKYGNDYKAMERDKKN 600
EK E++ K+P K++ K E + K + K+ E K+
Sbjct: 1728 EKAEEKPKSPTKKEKSPEKSAAEEVKSPTKKEKSPEKSAEEKPKS 1772
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 28.3 bits (60), Expect = 7.6
Identities = 26/105 (24%), Positives = 43/105 (40%)
Frame = +1
Query: 286 KKTSARNLREMGLVSDPNKTIKIPNFKQTQIQRAKQMVNQIDSDEEVETVVRLPPKKEVA 465
KK S+ + V P K K P QT ++ + S E+ PK++
Sbjct: 1671 KKESSPTKKTDDEVKSPTKKEKSP---QTVEEKPASPTKKEKSPEKSVVEEVKSPKEKSP 1727
Query: 466 EKLEKQAKAPRKRKFMLPKGQVEFITYLLDKYGNDYKAMERDKKN 600
EK E++ K+P K++ K E + K + K+ E K+
Sbjct: 1728 EKAEEKPKSPTKKEKSPEKSAAEEVKSPTKKEKSPEKSAEEKPKS 1772
>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
related protein 1 protein.
Length = 1359
Score = 28.3 bits (60), Expect = 7.6
Identities = 19/81 (23%), Positives = 41/81 (50%)
Frame = +1
Query: 265 VKEAWNNKKTSARNLREMGLVSDPNKTIKIPNFKQTQIQRAKQMVNQIDSDEEVETVVRL 444
VK++ NK+ S + E SD ++ + K + + + ++ + ++EV+ +
Sbjct: 165 VKKSKKNKEKSVKKRAETSEESDEDEKPSKKSKKGLKKKAKSESESESEDEKEVKKSKK- 223
Query: 445 PPKKEVAEKLEKQAKAPRKRK 507
KK V ++ E + +AP K+K
Sbjct: 224 KSKKVVKKESESEDEAPEKKK 244
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,719,973
Number of Sequences: 27780
Number of extensions: 282334
Number of successful extensions: 969
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 967
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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