Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_I15
         (880 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13951-1|CAA74289.1|  784|Drosophila melanogaster oxysterol bind...   119   6e-27
AY129448-1|AAM76190.1|  784|Drosophila melanogaster LD31802p pro...   119   6e-27
AE014297-3675|AAF56371.1|  784|Drosophila melanogaster CG6708-PA...   119   6e-27
AY095008-1|AAM11336.1|  455|Drosophila melanogaster GH12064p pro...    66   5e-11
AE013599-3768|AAF47130.1|  455|Drosophila melanogaster CG3860-PA...    66   5e-11
AJ132670-1|CAA10727.1|  158|Drosophila melanogaster homeodomain ...    29   6.4  

>Y13951-1|CAA74289.1|  784|Drosophila melanogaster oxysterol binding
           protein homologueprotein.
          Length = 784

 Score =  119 bits (286), Expect = 6e-27
 Identities = 59/115 (51%), Positives = 75/115 (65%)
 Frame = +3

Query: 417 QQVIFVEDKERAESAMGGADGSTTPSLPAKDTDIVVWPHVSQAAGCVDGRPRRTRVPDKP 596
           QQV  V     A    G  D     +LPAK++   ++   +     +  + RR RVPDKP
Sbjct: 338 QQVCLVSAPRVASGGQGDDDDDVDKALPAKESTDSIYGR-NWNPDLI--KKRRDRVPDKP 394

Query: 597 NYPLSLWSIMKNCIGKELSKIPIPVNFSEPLSMLQRLTEDYEYSSVLDQAAKFDD 761
           N+P+SLW IMKNCIGK+LSKIP+P+NF+EPLSMLQRL EDYEY+ +LD AA   D
Sbjct: 395 NHPISLWGIMKNCIGKDLSKIPMPINFNEPLSMLQRLVEDYEYTEILDYAATCQD 449


>AY129448-1|AAM76190.1|  784|Drosophila melanogaster LD31802p
           protein.
          Length = 784

 Score =  119 bits (286), Expect = 6e-27
 Identities = 59/115 (51%), Positives = 75/115 (65%)
 Frame = +3

Query: 417 QQVIFVEDKERAESAMGGADGSTTPSLPAKDTDIVVWPHVSQAAGCVDGRPRRTRVPDKP 596
           QQV  V     A    G  D     +LPAK++   ++   +     +  + RR RVPDKP
Sbjct: 338 QQVCLVSAPRVASGGQGDDDDDVDKALPAKESTDSIYGR-NWNPDLI--KKRRDRVPDKP 394

Query: 597 NYPLSLWSIMKNCIGKELSKIPIPVNFSEPLSMLQRLTEDYEYSSVLDQAAKFDD 761
           N+P+SLW IMKNCIGK+LSKIP+P+NF+EPLSMLQRL EDYEY+ +LD AA   D
Sbjct: 395 NHPISLWGIMKNCIGKDLSKIPMPINFNEPLSMLQRLVEDYEYTEILDYAATCQD 449



 Score = 29.9 bits (64), Expect = 4.8
 Identities = 12/16 (75%), Positives = 15/16 (93%)
 Frame = +2

Query: 767 QQLAYVAXFTVSSYAT 814
           +QLAY+A FTVS+YAT
Sbjct: 452 EQLAYIAAFTVSAYAT 467


>AE014297-3675|AAF56371.1|  784|Drosophila melanogaster CG6708-PA
           protein.
          Length = 784

 Score =  119 bits (286), Expect = 6e-27
 Identities = 59/115 (51%), Positives = 75/115 (65%)
 Frame = +3

Query: 417 QQVIFVEDKERAESAMGGADGSTTPSLPAKDTDIVVWPHVSQAAGCVDGRPRRTRVPDKP 596
           QQV  V     A    G  D     +LPAK++   ++   +     +  + RR RVPDKP
Sbjct: 338 QQVCLVSAPRVASGGQGDDDDDVDKALPAKESTDSIYGR-NWNPDLI--KKRRDRVPDKP 394

Query: 597 NYPLSLWSIMKNCIGKELSKIPIPVNFSEPLSMLQRLTEDYEYSSVLDQAAKFDD 761
           N+P+SLW IMKNCIGK+LSKIP+P+NF+EPLSMLQRL EDYEY+ +LD AA   D
Sbjct: 395 NHPISLWGIMKNCIGKDLSKIPMPINFNEPLSMLQRLVEDYEYTEILDYAATCQD 449



 Score = 29.9 bits (64), Expect = 4.8
 Identities = 12/16 (75%), Positives = 15/16 (93%)
 Frame = +2

Query: 767 QQLAYVAXFTVSSYAT 814
           +QLAY+A FTVS+YAT
Sbjct: 452 EQLAYIAAFTVSAYAT 467


>AY095008-1|AAM11336.1|  455|Drosophila melanogaster GH12064p
           protein.
          Length = 455

 Score = 66.5 bits (155), Expect = 5e-11
 Identities = 29/49 (59%), Positives = 40/49 (81%)
 Frame = +3

Query: 606 LSLWSIMKNCIGKELSKIPIPVNFSEPLSMLQRLTEDYEYSSVLDQAAK 752
           +S+W+I+KNCIGK+LSKI +PV  +EPLS LQRL E  EY+ +L +AA+
Sbjct: 25  VSIWAILKNCIGKDLSKITMPVMLNEPLSFLQRLCEYMEYAQLLTEAAQ 73


>AE013599-3768|AAF47130.1|  455|Drosophila melanogaster CG3860-PA
           protein.
          Length = 455

 Score = 66.5 bits (155), Expect = 5e-11
 Identities = 29/49 (59%), Positives = 40/49 (81%)
 Frame = +3

Query: 606 LSLWSIMKNCIGKELSKIPIPVNFSEPLSMLQRLTEDYEYSSVLDQAAK 752
           +S+W+I+KNCIGK+LSKI +PV  +EPLS LQRL E  EY+ +L +AA+
Sbjct: 25  VSIWAILKNCIGKDLSKITMPVMLNEPLSFLQRLCEYMEYAQLLTEAAQ 73


>AJ132670-1|CAA10727.1|  158|Drosophila melanogaster homeodomain
           protein protein.
          Length = 158

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 20/75 (26%), Positives = 30/75 (40%)
 Frame = -2

Query: 306 WLRCPPPLRQRIHGLHPQFRCLELSRYHRCQFFLSLNTYLVHYFCTHNYLTIRVKLSKIV 127
           WL+   P  Q      P+ R +  +R  R  F  +    L   FC  NYLT   +    V
Sbjct: 62  WLQNEAPAGQEHPSQRPKLRAISSNRKERTAFSKTQLKQLEAEFCYSNYLTRLRRYEIAV 121

Query: 126 ILWSNENIFRFFFRH 82
            L   E   + +F++
Sbjct: 122 ALELTERQVKVWFQN 136


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,726,246
Number of Sequences: 53049
Number of extensions: 538078
Number of successful extensions: 1775
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1772
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4270708416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)