Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_I15
(880 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL117202-30|CAO82060.1| 449|Caenorhabditis elegans Hypothetical... 109 3e-24
AL117202-29|CAO82059.1| 842|Caenorhabditis elegans Hypothetical... 109 3e-24
AL117202-15|CAC42376.1| 627|Caenorhabditis elegans Hypothetical... 109 3e-24
AL117202-14|CAB57894.2| 766|Caenorhabditis elegans Hypothetical... 109 3e-24
Z81061-1|CAB02934.3| 436|Caenorhabditis elegans Hypothetical pr... 59 5e-09
AF047655-11|AAC04405.1| 336|Caenorhabditis elegans Seven tm rec... 31 1.4
AC084158-38|AAM15617.2| 488|Caenorhabditis elegans Hypothetical... 31 1.4
AC084158-37|AAM15615.2| 486|Caenorhabditis elegans Hypothetical... 31 1.4
U80027-22|AAC48112.1| 336|Caenorhabditis elegans Seven tm recep... 30 1.9
AF101318-3|AAK68598.1| 336|Caenorhabditis elegans Seven tm rece... 29 3.3
U55363-2|AAA97961.3| 357|Caenorhabditis elegans Serpentine rece... 29 4.4
AF077531-4|AAC64611.1| 437|Caenorhabditis elegans Hypothetical ... 29 4.4
AF101318-4|AAC69346.1| 337|Caenorhabditis elegans Seven tm rece... 29 5.8
Z70287-8|CAA94301.2| 1717|Caenorhabditis elegans Hypothetical pr... 28 7.7
>AL117202-30|CAO82060.1| 449|Caenorhabditis elegans Hypothetical
protein Y47D3A.17d protein.
Length = 449
Score = 109 bits (262), Expect = 3e-24
Identities = 51/98 (52%), Positives = 64/98 (65%)
Frame = +3
Query: 561 GRPRRTRVPDKPNYPLSLWSIMKNCIGKELSKIPIPVNFSEPLSMLQRLTEDYEYSSVLD 740
GR RRT VP++PN P++LWSIMKNCIGKELSKIP+PVNFSEP+S+LQR+TED EY+++L+
Sbjct: 49 GRQRRTTVPERPNLPINLWSIMKNCIGKELSKIPMPVNFSEPISVLQRVTEDLEYANLLE 108
Query: 741 QAAKFDDXXXXXXXXXXXXXXXXXXXXXDKQXXNPLLG 854
AK + NPLLG
Sbjct: 109 TGAKLSTLEQMCYVAAYAASNYSTTCHRTNKPFNPLLG 146
>AL117202-29|CAO82059.1| 842|Caenorhabditis elegans Hypothetical
protein Y47D3A.17c protein.
Length = 842
Score = 109 bits (262), Expect = 3e-24
Identities = 51/98 (52%), Positives = 64/98 (65%)
Frame = +3
Query: 561 GRPRRTRVPDKPNYPLSLWSIMKNCIGKELSKIPIPVNFSEPLSMLQRLTEDYEYSSVLD 740
GR RRT VP++PN P++LWSIMKNCIGKELSKIP+PVNFSEP+S+LQR+TED EY+++L+
Sbjct: 442 GRQRRTTVPERPNLPINLWSIMKNCIGKELSKIPMPVNFSEPISVLQRVTEDLEYANLLE 501
Query: 741 QAAKFDDXXXXXXXXXXXXXXXXXXXXXDKQXXNPLLG 854
AK + NPLLG
Sbjct: 502 TGAKLSTLEQMCYVAAYAASNYSTTCHRTNKPFNPLLG 539
>AL117202-15|CAC42376.1| 627|Caenorhabditis elegans Hypothetical
protein Y47D3A.17b protein.
Length = 627
Score = 109 bits (262), Expect = 3e-24
Identities = 51/98 (52%), Positives = 64/98 (65%)
Frame = +3
Query: 561 GRPRRTRVPDKPNYPLSLWSIMKNCIGKELSKIPIPVNFSEPLSMLQRLTEDYEYSSVLD 740
GR RRT VP++PN P++LWSIMKNCIGKELSKIP+PVNFSEP+S+LQR+TED EY+++L+
Sbjct: 227 GRQRRTTVPERPNLPINLWSIMKNCIGKELSKIPMPVNFSEPISVLQRVTEDLEYANLLE 286
Query: 741 QAAKFDDXXXXXXXXXXXXXXXXXXXXXDKQXXNPLLG 854
AK + NPLLG
Sbjct: 287 TGAKLSTLEQMCYVAAYAASNYSTTCHRTNKPFNPLLG 324
>AL117202-14|CAB57894.2| 766|Caenorhabditis elegans Hypothetical
protein Y47D3A.17a protein.
Length = 766
Score = 109 bits (262), Expect = 3e-24
Identities = 51/98 (52%), Positives = 64/98 (65%)
Frame = +3
Query: 561 GRPRRTRVPDKPNYPLSLWSIMKNCIGKELSKIPIPVNFSEPLSMLQRLTEDYEYSSVLD 740
GR RRT VP++PN P++LWSIMKNCIGKELSKIP+PVNFSEP+S+LQR+TED EY+++L+
Sbjct: 366 GRQRRTTVPERPNLPINLWSIMKNCIGKELSKIPMPVNFSEPISVLQRVTEDLEYANLLE 425
Query: 741 QAAKFDDXXXXXXXXXXXXXXXXXXXXXDKQXXNPLLG 854
AK + NPLLG
Sbjct: 426 TGAKLSTLEQMCYVAAYAASNYSTTCHRTNKPFNPLLG 463
>Z81061-1|CAB02934.3| 436|Caenorhabditis elegans Hypothetical
protein F14H8.1 protein.
Length = 436
Score = 58.8 bits (136), Expect = 5e-09
Identities = 28/66 (42%), Positives = 46/66 (69%), Gaps = 2/66 (3%)
Frame = +3
Query: 570 RRTRVPDKPNYP--LSLWSIMKNCIGKELSKIPIPVNFSEPLSMLQRLTEDYEYSSVLDQ 743
+RTR+P P +S+W I++ +GK+ S+ +PV +EPLS LQRL+E+ +Y+ +L++
Sbjct: 29 QRTRLPATYIAPEDVSIWDIIRPNLGKDFSRFTVPVFMNEPLSFLQRLSENVQYNYLLEK 88
Query: 744 AAKFDD 761
AAK D
Sbjct: 89 AAKCSD 94
>AF047655-11|AAC04405.1| 336|Caenorhabditis elegans Seven tm
receptor protein 63 protein.
Length = 336
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = -2
Query: 210 FLSLNTYLVHYFC-THNYLTIRVKLSKIVILWSNENIFRFFFRHLIVRSI 64
FL+ YLV +C +L ++ +L+K+ I SN+++ R FF+ LI +SI
Sbjct: 204 FLNSLGYLVILYCGVQMHLNMKKELAKLSI--SNQDLQRQFFKALIAQSI 251
>AC084158-38|AAM15617.2| 488|Caenorhabditis elegans Hypothetical
protein Y69A2AR.1c protein.
Length = 488
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = +3
Query: 444 ERAESAMGGADGSTTPSLPAKDTDIVVWPHVSQAAGCVDGRPRRTRVPDKPNYPLSLWSI 623
E+A A+ TT P K+ D++ A D +R NYP +LW+
Sbjct: 22 EKASGEPKKAEDPTTKKRPRKNEDLL-----KDAPETSDDEDQRAETAGSRNYPANLWNR 76
Query: 624 MKN 632
+KN
Sbjct: 77 LKN 79
>AC084158-37|AAM15615.2| 486|Caenorhabditis elegans Hypothetical
protein Y69A2AR.1a protein.
Length = 486
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = +3
Query: 444 ERAESAMGGADGSTTPSLPAKDTDIVVWPHVSQAAGCVDGRPRRTRVPDKPNYPLSLWSI 623
E+A A+ TT P K+ D++ A D +R NYP +LW+
Sbjct: 22 EKASGEPKKAEDPTTKKRPRKNEDLL-----KDAPETSDDEDQRAETAGSRNYPANLWNR 76
Query: 624 MKN 632
+KN
Sbjct: 77 LKN 79
>U80027-22|AAC48112.1| 336|Caenorhabditis elegans Seven tm receptor
protein 64 protein.
Length = 336
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = -2
Query: 210 FLSLNTYLVHYFC-THNYLTIRVKLSKIVILWSNENIFRFFFRHLIVRSI 64
FL+ YLV +C +L ++ +L+K+ I SN+ + R FF+ LI +SI
Sbjct: 204 FLNSLGYLVILYCGVQMHLNMKKELAKLSI--SNQELQRQFFKALIAQSI 251
>AF101318-3|AAK68598.1| 336|Caenorhabditis elegans Seven tm
receptor protein 69 protein.
Length = 336
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/60 (25%), Positives = 34/60 (56%)
Frame = -2
Query: 207 LSLNTYLVHYFCTHNYLTIRVKLSKIVILWSNENIFRFFFRHLIVRSIPRRIL*TILRVP 28
+S + +++ C +++++++L+K + N+ + R FF+ LIV+ I I I +P
Sbjct: 207 ISFHYFIIIVCCYKMHISMKIELAKFSV--KNQTLHRQFFKALIVQIIGPTIFLIIPTIP 264
>U55363-2|AAA97961.3| 357|Caenorhabditis elegans Serpentine
receptor, class h protein28 protein.
Length = 357
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = -2
Query: 210 FLSLNTYLVHYFCTHNYLTIRVKLSKIVILWSNENIFRFFFRHLIVRSIPRR 55
+ L+ H F Y++ LS +L+ N++ +FF+ L+ ++P R
Sbjct: 141 YYKLSIRFGHLFVYGTYISSVCSLSNFALLYENQDNAKFFWYKLLAGNMPAR 192
>AF077531-4|AAC64611.1| 437|Caenorhabditis elegans Hypothetical
protein F13C5.1 protein.
Length = 437
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 4/46 (8%)
Frame = -1
Query: 211 FFIT*HIFSTLFL----YA*LFNNSCETLQNCNFMVKRKYFSIFLP 86
FFI+ H+ +L L Y+ LF+ + +TLQ+C F ++F FLP
Sbjct: 65 FFISIHLVLSLLLKIVIYS-LFSGAPQTLQSCEFSFPSEFFD-FLP 108
>AF101318-4|AAC69346.1| 337|Caenorhabditis elegans Seven tm
receptor protein 68 protein.
Length = 337
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/52 (25%), Positives = 29/52 (55%)
Frame = -2
Query: 219 CQFFLSLNTYLVHYFCTHNYLTIRVKLSKIVILWSNENIFRFFFRHLIVRSI 64
C F + ++ ++ Y C + +++ +L+K N+ + R FF LIV+++
Sbjct: 202 CIFLIGIHYIIIIYCCLRMHFSMKKELAKFST--QNQKLQRQFFHALIVQTL 251
>Z70287-8|CAA94301.2| 1717|Caenorhabditis elegans Hypothetical
protein R09E10.7 protein.
Length = 1717
Score = 28.3 bits (60), Expect = 7.7
Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = +3
Query: 519 VVWPHVSQAAGCVDGRPRRTRVPDKPNYPLSLWSIMK---NCIGKELSKIPIPVNFSEPL 689
VV+ H S A+G RT VP PN PLS +M + IG L+ I
Sbjct: 64 VVYQHYS-ASGRFSSASTRTVVPGDPNNPLSQHPMMSRGDDSIGTLLTLSEISARVCAEK 122
Query: 690 SMLQRLTEDYEY 725
Q+L E Y +
Sbjct: 123 WSFQQLEEMYSH 134
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,230,545
Number of Sequences: 27780
Number of extensions: 278311
Number of successful extensions: 858
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 854
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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