Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_I14
         (882 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          23   3.7  
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          23   4.9  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    23   4.9  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   4.9  

>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +2

Query: 380 DKFLKENLQGDEKYV 424
           D FLK  + GDEK+V
Sbjct: 22  DPFLKRPITGDEKWV 36


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +2

Query: 380 DKFLKENLQGDEKYV 424
           D FLK  + GDEK+V
Sbjct: 22  DPFLKRLITGDEKWV 36


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +2

Query: 380 DKFLKENLQGDEKYV 424
           D FLK  + GDEK+V
Sbjct: 143 DPFLKRLITGDEKWV 157


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -2

Query: 236 LPLFWQRPRSWWEIMPPVTSVNG 168
           + L W+  R+ ++I+P + S NG
Sbjct: 217 MKLGWKSARTRFDILPLILSANG 239


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,501
Number of Sequences: 438
Number of extensions: 3152
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)