Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_I13
         (842 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF106933-1|AAD09426.1| 2051|Drosophila melanogaster plexin B pro...    33   0.37 
BT010009-1|AAQ22478.1| 2051|Drosophila melanogaster RE22882p pro...    33   0.65 
AE014135-2|AAF59374.2| 2051|Drosophila melanogaster CG17245-PA p...    33   0.65 
AY071581-1|AAL49203.1|  813|Drosophila melanogaster RE63672p pro...    32   0.86 
AE013599-1523|AAF58489.1|  813|Drosophila melanogaster CG8594-PA...    32   0.86 

>AF106933-1|AAD09426.1| 2051|Drosophila melanogaster plexin B protein.
          Length = 2051

 Score = 33.5 bits (73), Expect = 0.37
 Identities = 24/103 (23%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
 Frame = +2

Query: 416  DYIFEKATDQATQSSLEQWIQIILKCFSSLDHIVDSEKMAMNLINLLEITSEK-MVR--L 586
            D+IF+     +  S L    Q  +   S+ +H +  +  +  L+   +I + + MV+   
Sbjct: 1909 DFIFDVNKTYSVDSCLSVXAQTFMDACSTSEHRLGKDSPSNKLLFAKDIPNYRIMVKEFY 1968

Query: 587  KIITAIPDIIGDQQHNNIAMEISRILNEDHDLIPAILDCLIYL 715
            + ++ +P I  DQ+ +    ++S   NE+ D I A+ +  IY+
Sbjct: 1969 RDVSRLPQI-SDQEMSTAMQQLSVRQNEEFDTISALKELYIYI 2010


>BT010009-1|AAQ22478.1| 2051|Drosophila melanogaster RE22882p protein.
          Length = 2051

 Score = 32.7 bits (71), Expect = 0.65
 Identities = 24/103 (23%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
 Frame = +2

Query: 416  DYIFEKATDQATQSSLEQWIQIILKCFSSLDHIVDSEKMAMNLINLLEITSEK-MVR--L 586
            D+IF+     +  S L    Q  +   S+ +H +  +  +  L+   +I + + MV+   
Sbjct: 1909 DFIFDVNKTYSVDSCLSVIAQTFMDACSTSEHRLGKDSPSNKLLFAKDIPNYRIMVKEFY 1968

Query: 587  KIITAIPDIIGDQQHNNIAMEISRILNEDHDLIPAILDCLIYL 715
            + ++ +P I  DQ+ +    ++S   NE+ D I A+ +  IY+
Sbjct: 1969 RDVSRLPQI-SDQEMSTAMQQLSVRQNEEFDTISALKELYIYI 2010


>AE014135-2|AAF59374.2| 2051|Drosophila melanogaster CG17245-PA
            protein.
          Length = 2051

 Score = 32.7 bits (71), Expect = 0.65
 Identities = 24/103 (23%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
 Frame = +2

Query: 416  DYIFEKATDQATQSSLEQWIQIILKCFSSLDHIVDSEKMAMNLINLLEITSEK-MVR--L 586
            D+IF+     +  S L    Q  +   S+ +H +  +  +  L+   +I + + MV+   
Sbjct: 1909 DFIFDVNKTYSVDSCLSVIAQTFMDACSTSEHRLGKDSPSNKLLFAKDIPNYRIMVKEFY 1968

Query: 587  KIITAIPDIIGDQQHNNIAMEISRILNEDHDLIPAILDCLIYL 715
            + ++ +P I  DQ+ +    ++S   NE+ D I A+ +  IY+
Sbjct: 1969 RDVSRLPQI-SDQEMSTAMQQLSVRQNEEFDTISALKELYIYI 2010


>AY071581-1|AAL49203.1|  813|Drosophila melanogaster RE63672p
           protein.
          Length = 813

 Score = 32.3 bits (70), Expect = 0.86
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -2

Query: 247 SNVXEGNRNDFLNSF*CFLLFELTHEKRNFFLGGLSA 137
           + + +G    FL  F  F  F   HEKR+F LGG +A
Sbjct: 285 AGISQGKSTTFLKDFRIFKAFRDDHEKRDFVLGGGAA 321


>AE013599-1523|AAF58489.1|  813|Drosophila melanogaster CG8594-PA
           protein.
          Length = 813

 Score = 32.3 bits (70), Expect = 0.86
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -2

Query: 247 SNVXEGNRNDFLNSF*CFLLFELTHEKRNFFLGGLSA 137
           + + +G    FL  F  F  F   HEKR+F LGG +A
Sbjct: 285 AGISQGKSTTFLKDFRIFKAFRDDHEKRDFVLGGGAA 321


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,687,657
Number of Sequences: 53049
Number of extensions: 569561
Number of successful extensions: 1237
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1237
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4024321392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)