Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_I11
(885 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72511-1|CAA96655.1| 186|Caenorhabditis elegans Hypothetical pr... 72 5e-13
Z72513-3|CAA96671.2| 127|Caenorhabditis elegans Hypothetical pr... 61 1e-09
L23651-2|ABA54424.1| 124|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 34 0.16
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 31 1.4
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 31 1.4
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 31 1.4
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 31 1.4
>Z72511-1|CAA96655.1| 186|Caenorhabditis elegans Hypothetical
protein F55A11.1 protein.
Length = 186
Score = 72.1 bits (169), Expect = 5e-13
Identities = 30/68 (44%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Frame = +3
Query: 618 HIQEHMDVPID-TSKMSDQELQFHYFKMHDADNNNKLDGCELIKSLIHWHEQGHKQENPP 794
HI+EH+D +D T+ M+ ++LQFHYF MHD D N KLDG ELIK++ H+H + ++
Sbjct: 60 HIKEHLDGKVDPTANMTPEQLQFHYFNMHDLDKNGKLDGVELIKAITHFHAENPGPQHTQ 119
Query: 795 SEARVGEK 818
+ A +
Sbjct: 120 NNANANHQ 127
>Z72513-3|CAA96671.2| 127|Caenorhabditis elegans Hypothetical
protein T04F3.4 protein.
Length = 127
Score = 60.9 bits (141), Expect = 1e-09
Identities = 22/58 (37%), Positives = 41/58 (70%)
Frame = +3
Query: 618 HIQEHMDVPIDTSKMSDQELQFHYFKMHDADNNNKLDGCELIKSLIHWHEQGHKQENP 791
HI++H++ I+ K+++++ +FHYF MHD + +N +DG E++K+L H H+ H +P
Sbjct: 34 HIKQHLENKIEVEKLTEEQQRFHYFSMHDLNKDNFIDGIEILKALTHTHD-AHDSGHP 90
>L23651-2|ABA54424.1| 124|Caenorhabditis elegans Hypothetical
protein C29E4.14 protein.
Length = 124
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +3
Query: 618 HIQEHMDVPIDTSK-MSDQELQFHYFKMHDADNNNKLDGCELIKSLIHWHEQGHKQENPP 794
H+++H I+ K S ++ +F+YFK+ D + +N LDG EL K + ++ K +
Sbjct: 35 HLKDHYGNKIEIEKHTSSKDRKFYYFKVGDTNQDNHLDGVELFKMITEHSDEKTKMDVEM 94
Query: 795 SEARVGEKISXEDE 836
E + +S D+
Sbjct: 95 IEVQADLVLSELDK 108
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 33.9 bits (74), Expect = 0.16
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = -1
Query: 729 RLTCCCCPRRAF*SSETVIPGRTSSTCLWERPCALGCDSMVGMSC 595
R CCCC RR T R + C RPC GC G C
Sbjct: 90 RPRCCCCCRRCCTCCRTCCCTRCCTCC---RPCCCGCGCGCGCGC 131
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = -1
Query: 735 RSRLTCCCCPRRAF*SSETVIPGRTSSTCLWERPCALGCDSMVGMSC 595
R R CCC P+ T R + C RPC GC G C
Sbjct: 70 RPRCCCCCRPKCCCTCCRTCCCTRCCTCC---RPCCCGCGCGCGCGC 113
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -1
Query: 729 RLTCCCCPRRAF*SSETVIPGRTSSTCLWERPCALGC 619
R CCCC RR T R + C RPC GC
Sbjct: 88 RPRCCCCCRRCCTCCRTCCCTRCCTCC---RPCCCGC 121
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -1
Query: 729 RLTCCCCPRRAF*SSETVIPGRTSSTCLWERPCALGC 619
R CCCC RR T R + C RPC GC
Sbjct: 89 RPKCCCCCRRCCTCCRTCCCTRCCTCC---RPCCCGC 122
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -1
Query: 729 RLTCCCCPRRAF*SSETVIPGRTSSTCLWERPCALGC 619
R CCCC RR T R + C RPC GC
Sbjct: 89 RPRCCCCCRRCCTCCRTCCCTRCCTCC---RPCCCGC 122
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -1
Query: 729 RLTCCCCPRRAF*SSETVIPGRTSSTCLWERPCALGC 619
R CCCC RR T R + C RPC GC
Sbjct: 90 RPRCCCCCRRCCTCCRTCCCTRCCTCC---RPCCCGC 123
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,098,926
Number of Sequences: 27780
Number of extensions: 270855
Number of successful extensions: 832
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 830
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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