Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_I10
         (879 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061364-1|AAL28912.1|  252|Drosophila melanogaster LD28680p pro...    31   2.8  
AE014134-1499|AAN10665.1|  333|Drosophila melanogaster CG31898-P...    31   2.8  
AY061181-1|AAL28729.1|  158|Drosophila melanogaster LD14807p pro...    30   4.8  

>AY061364-1|AAL28912.1|  252|Drosophila melanogaster LD28680p
           protein.
          Length = 252

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = -3

Query: 181 KPQCTGLKELWWFEHHQAFQLVPRRQQPIEVQPRNKQRPHLETNIKILRIPYS 23
           K  C+GL E  + E   A QLVP  + P +  P ++ R +L+ N + ++  Y+
Sbjct: 184 KSNCSGLTEDSYTESSPAIQLVP-SESPRQYLPSSQNRVNLKANPRCVKGGYA 235


>AE014134-1499|AAN10665.1|  333|Drosophila melanogaster CG31898-PA
           protein.
          Length = 333

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = -3

Query: 181 KPQCTGLKELWWFEHHQAFQLVPRRQQPIEVQPRNKQRPHLETNIKILRIPYS 23
           K  C+GL E  + E   A QLVP  + P +  P ++ R +L+ N + ++  Y+
Sbjct: 184 KSNCSGLTEDSYTESSPAIQLVP-SESPRQYLPSSQNRVNLKANPRCVKGGYA 235


>AY061181-1|AAL28729.1|  158|Drosophila melanogaster LD14807p
           protein.
          Length = 158

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -3

Query: 133 QAFQLVPRRQQPIEVQPRNKQRP 65
           Q  QL+PRRQ P    PR K+RP
Sbjct: 52  QLRQLLPRRQLPAMTAPRKKRRP 74


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,172,522
Number of Sequences: 53049
Number of extensions: 463439
Number of successful extensions: 1192
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1088
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1192
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4270708416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)