Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_I07
(880 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73426-5|CAO78745.1| 1607|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z73105-4|CAA97443.2| 1406|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z69384-10|CAA93420.2| 1406|Caenorhabditis elegans Hypothetical p... 29 4.4
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 28 7.7
U63744-1|AAC47308.1| 572|Caenorhabditis elegans p21-activated k... 28 7.7
U29612-11|AAO61438.1| 523|Caenorhabditis elegans P21-activated ... 28 7.7
U29612-10|AAA68805.2| 572|Caenorhabditis elegans P21-activated ... 28 7.7
U29612-9|AAL65775.1| 569|Caenorhabditis elegans P21-activated k... 28 7.7
D83215-1|BAA11844.1| 569|Caenorhabditis elegans protein kinase ... 28 7.7
>Z73426-5|CAO78745.1| 1607|Caenorhabditis elegans Hypothetical protein
F40F11.2b protein.
Length = 1607
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 296 SSGRPNTSAIVERSRERRPPPLVPSVTVVHGPRPSLPS 409
SS +P + + R R P+VP +TV + SLPS
Sbjct: 1437 SSHKPPQAVVAPRPNLIRTAPVVPKITVTNASESSLPS 1474
>Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical protein
F40F11.2a protein.
Length = 1593
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 296 SSGRPNTSAIVERSRERRPPPLVPSVTVVHGPRPSLPS 409
SS +P + + R R P+VP +TV + SLPS
Sbjct: 1423 SSHKPPQAVVAPRPNLIRTAPVVPKITVTNASESSLPS 1460
>Z73105-4|CAA97443.2| 1406|Caenorhabditis elegans Hypothetical
protein T11G6.5 protein.
Length = 1406
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/33 (54%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +2
Query: 347 RPPPLVPSVTVVHGPRPSLPSALP---PQPVYR 436
RPPP V+H PR +LPSA P PQPV R
Sbjct: 631 RPPP------VLHSPRSALPSAGPFSSPQPVPR 657
>Z69384-10|CAA93420.2| 1406|Caenorhabditis elegans Hypothetical
protein T11G6.5 protein.
Length = 1406
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/33 (54%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +2
Query: 347 RPPPLVPSVTVVHGPRPSLPSALP---PQPVYR 436
RPPP V+H PR +LPSA P PQPV R
Sbjct: 631 RPPP------VLHSPRSALPSAGPFSSPQPVPR 657
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +2
Query: 287 PADSSGRPNTSAIVERSRERRPPPLVPSVTVVHGPRPSLPSALPPQP 427
P S P + S +RRPP PS + PR + PS +PP P
Sbjct: 150 PPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPR-TPPSPIPPPP 195
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +2
Query: 335 SRERRPPPLVPSVTVVHGPRPSLPSALPPQP 427
S + P P VPS T V P P+ P +PP P
Sbjct: 46 SAPQDPSPAVPS-TPVRVPYPTAPPPIPPAP 75
>U63744-1|AAC47308.1| 572|Caenorhabditis elegans p21-activated
kinase CePAK protein.
Length = 572
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +2
Query: 302 GRPNTSAIVERSRERRPPPLVPSVTVVHGPRPS--LPSALPPQP 427
G P T+ V +R PP P V HG P+ +P A+P +P
Sbjct: 193 GVPPTTFSVNENRSSMPPSYAPP-PVPHGETPADIVPPAIPDRP 235
>U29612-11|AAO61438.1| 523|Caenorhabditis elegans P21-activated
kinase family protein1, isoform c protein.
Length = 523
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +2
Query: 302 GRPNTSAIVERSRERRPPPLVPSVTVVHGPRPS--LPSALPPQP 427
G P T+ V +R PP P V HG P+ +P A+P +P
Sbjct: 144 GVPPTTFSVNENRSSMPPSYAPP-PVPHGETPADIVPPAIPDRP 186
>U29612-10|AAA68805.2| 572|Caenorhabditis elegans P21-activated
kinase family protein1, isoform a protein.
Length = 572
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +2
Query: 302 GRPNTSAIVERSRERRPPPLVPSVTVVHGPRPS--LPSALPPQP 427
G P T+ V +R PP P V HG P+ +P A+P +P
Sbjct: 193 GVPPTTFSVNENRSSMPPSYAPP-PVPHGETPADIVPPAIPDRP 235
>U29612-9|AAL65775.1| 569|Caenorhabditis elegans P21-activated
kinase family protein1, isoform b protein.
Length = 569
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +2
Query: 302 GRPNTSAIVERSRERRPPPLVPSVTVVHGPRPS--LPSALPPQP 427
G P T+ V +R PP P V HG P+ +P A+P +P
Sbjct: 190 GVPPTTFSVNENRSSMPPSYAPP-PVPHGETPADIVPPAIPDRP 232
>D83215-1|BAA11844.1| 569|Caenorhabditis elegans protein kinase
protein.
Length = 569
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +2
Query: 302 GRPNTSAIVERSRERRPPPLVPSVTVVHGPRPS--LPSALPPQP 427
G P T+ V +R PP P V HG P+ +P A+P +P
Sbjct: 190 GVPPTTFSVNENRSSMPPSYAPP-PVPHGETPADIVPPAIPDRP 232
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,128,775
Number of Sequences: 27780
Number of extensions: 203094
Number of successful extensions: 1226
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1216
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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