Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_I05
(895 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1048 + 33748260-33748433,33748886-33748978,33750174-337503... 32 0.54
03_05_0827 + 28016157-28017575 31 1.2
08_02_1469 + 27345430-27345534,27345690-27345763,27345852-273459... 30 2.2
08_01_0079 - 554936-554977,555108-555297,555384-555430,556039-55... 30 2.2
06_01_0027 - 271199-271424,271628-272095,272721-273018,273133-27... 30 2.2
05_04_0437 + 21234261-21234592,21234929-21234997,21235506-212356... 30 2.2
10_01_0083 - 1046086-1047086,1047976-1048161,1048266-1049247 29 3.8
06_01_1185 + 10183666-10184469 29 3.8
12_02_0780 + 23094989-23095380,23096132-23096573,23096687-230973... 29 5.0
11_06_0713 + 26524984-26525276,26526008-26526434,26526550-265271... 29 6.6
09_04_0295 - 16454862-16455035,16455122-16455264,16455393-164559... 29 6.6
09_02_0339 + 7452967-7453068,7453281-7453339,7453889-7454701,745... 29 6.6
03_06_0044 + 31255284-31256012 29 6.6
11_05_0022 + 18442258-18442619,18443827-18443887,18444070-18444186 28 8.7
10_08_0105 - 14828097-14828226,14828371-14828547,14829690-148297... 28 8.7
07_03_0169 + 14670994-14673714,14673799-14673879,14675460-146756... 28 8.7
06_03_0927 + 26015956-26018230,26018323-26018471,26018550-260186... 28 8.7
06_03_0636 + 22983898-22985043 28 8.7
06_01_0569 + 4019254-4021996,4022121-4022272,4022356-4022427,402... 28 8.7
>02_05_1048 +
33748260-33748433,33748886-33748978,33750174-33750371,
33750502-33750675,33750769-33750875,33751233-33751564,
33751654-33752147
Length = 523
Score = 32.3 bits (70), Expect = 0.54
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 7/86 (8%)
Frame = +1
Query: 298 VVLDRTAGCLSADESGLMQCKSSQVPHQHPKVIECCYDDDLCNLRLHPQLSE-----PSP 462
V D T G S ++QC+SS + K+I+C D L L L P + + P
Sbjct: 236 VASDFTGGQASIKRRHILQCQSSLLSKNFEKLIQC--DQRLNYLSLQPYMIDSPVFRPKT 293
Query: 463 D--VTESPGVRPPNHEQSHLIGRHRS 534
+ + E+P H S+L G H S
Sbjct: 294 EGSIFENPNKSKSYHGFSYLEGEHES 319
>03_05_0827 + 28016157-28017575
Length = 472
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = -1
Query: 538 TESDGDQ*GGTARDSGAAPPGTPSRPVTVQIAEDGAEGCTGRRRNSTRLLSGADVAL 368
TES DQ R G A P ++ T + A +GA G + R S L VA+
Sbjct: 161 TESSADQREAIVRSMGTAAPSFEAKRATEEFATEGASGVSIMTRYSLTLQRSKLVAM 217
>08_02_1469 +
27345430-27345534,27345690-27345763,27345852-27345996,
27346359-27346460
Length = 141
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +1
Query: 262 VAVEEVLDESGSVVLDRTAGCLSADESGLMQCKSSQVPHQHPKVIECCYDDDLCNLR 432
+A E ++DE G + L A C+ D +G + ++S + K+ + DDD N R
Sbjct: 24 LATESLMDEQGLLQLQLHASCMVHDATGAI-LQASSISMIRNKIDQYTNDDDAGNAR 79
>08_01_0079 -
554936-554977,555108-555297,555384-555430,556039-556139,
556223-556271,556432-556494,556602-556695,556822-556924,
557719-557791,557872-557984,558068-558149,558386-558913,
559015-559098,560156-560305,561021-561191,561759-561809,
562601-562738,562823-562894,563236-563391,563681-563839,
564080-564180,564577-564829
Length = 939
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -1
Query: 505 ARDSGAAPPGTPSRPVTVQIAEDGAEGCTGRRRNSTRLLSGAD 377
A D GA+P + P + ED E C RR+ R S +D
Sbjct: 26 AVDGGASPDSLRNTPSNIARLEDAIEHCAARRKYLARTKSPSD 68
>06_01_0027 -
271199-271424,271628-272095,272721-273018,273133-273343,
273427-274124,274921-274969,276059-276112,276244-276275,
276319-276484,276563-276628,276717-276812,276868-276957,
277302-277398,277496-277575,277709-277753,278006-278134,
278593-278722,278888-279222,279918-280053,280149-280328,
280422-280679,280752-281137
Length = 1409
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +1
Query: 196 ARACPDGSSNGTCVTQVGGYCFVAVEEVLDESGSVVLDRTAGCLSADESG 345
+R C +G+ C+ ++ G C + E+L ES G ++ ++SG
Sbjct: 736 SRYCYEGADEEDCIIEMDGRCLYSSIELLIESAGCSSVAAVGVMAKEQSG 785
>05_04_0437 +
21234261-21234592,21234929-21234997,21235506-21235629,
21235740-21235745
Length = 176
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -1
Query: 532 SDGDQ*GGTARDSGAAPPGTPSRPVTVQIAEDGAEGCT 419
SDG G DSGAAP +PS+ ++ E G GC+
Sbjct: 86 SDGG--GSEGSDSGAAPIESPSKRPRRRLVEHGHSGCS 121
>10_01_0083 - 1046086-1047086,1047976-1048161,1048266-1049247
Length = 722
Score = 29.5 bits (63), Expect = 3.8
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 322 CLSADESGLMQCKSSQVPHQHPKVIECCYDDDLCNLRLH-PQLSEPSP 462
C++A S CK S +P + + C D D C LR+ P+L + P
Sbjct: 299 CVNATSSPGYICKCSDHYDGNPYIADGCQDIDECQLRIQFPELRDVYP 346
>06_01_1185 + 10183666-10184469
Length = 267
Score = 29.5 bits (63), Expect = 3.8
Identities = 26/111 (23%), Positives = 49/111 (44%), Gaps = 9/111 (8%)
Frame = +1
Query: 334 DESGLMQCKSSQVPHQHPKVIECCYDDDLCNLRLHPQLSEPSPDVTESPGVRPPNHEQSH 513
+ S L + S + HQHP+ + + P + P + P ++SH
Sbjct: 141 NNSSLQLQRGSMLLHQHPQQVSSAPGRSTVVSSSNAPRIAPIRRPIDKPPLGNPASKKSH 200
Query: 514 LIGRHRSLCGSHRFPGS---FFVVIQ------TTEARLQEAAVSTSAADMF 639
L+ + R L HR P S F V +Q T+++ L + + ++S+ D++
Sbjct: 201 LLRQSRELLLHHRRPTSRATFPVRLQLVGTKGTSQSGLNDGSNNSSSQDLY 251
>12_02_0780 +
23094989-23095380,23096132-23096573,23096687-23097311,
23098240-23098280,23098371-23098439,23098779-23098879,
23099422-23099500,23099946-23100044,23100123-23100191,
23100283-23100332,23100416-23100497,23100997-23101091,
23101263-23101395
Length = 758
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +3
Query: 726 GKGVTGKVWLAKWRGEKVAVKVFFTTE 806
G+G G V+ A W G VAVKVF E
Sbjct: 485 GQGSCGTVYHALWYGSDVAVKVFSKQE 511
>11_06_0713 +
26524984-26525276,26526008-26526434,26526550-26527171,
26528059-26528099,26528181-26528249,26528565-26528665,
26529300-26529378,26529955-26530053,26530129-26530197,
26530326-26530375,26530482-26530548,26531031-26531125,
26534469-26534856
Length = 799
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 726 GKGVTGKVWLAKWRGEKVAVKVF 794
G+G G V+ A W G VAVKVF
Sbjct: 446 GQGSCGTVYHALWYGSDVAVKVF 468
>09_04_0295 -
16454862-16455035,16455122-16455264,16455393-16455939,
16456006-16456332
Length = 396
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +3
Query: 639 PKYLQGRALACRYSSKGLLPNKYRWWSPSGKGVTGKVWLAKWRGEKVAVK 788
P + R LA ++ + P++ G+G T V+ A WRG VAVK
Sbjct: 89 PYFAATRDLAVQHGWS-VAPDEIELHEMIGRGSTADVYRATWRGLDVAVK 137
>09_02_0339 +
7452967-7453068,7453281-7453339,7453889-7454701,
7455123-7455498,7455978-7456019
Length = 463
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +3
Query: 654 GRALA-CRYSSKGLLPNKYRWWSPSGKGVTGKVW 752
GR LA C YS +P K +P+ KG G+ W
Sbjct: 267 GRVLARCLYSDPSAIPRKIVMENPANKGGYGESW 300
>03_06_0044 + 31255284-31256012
Length = 242
Score = 28.7 bits (61), Expect = 6.6
Identities = 21/51 (41%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Frame = +1
Query: 409 DDDLCNLRLHPQLSEP---SPDVTESPGVRPPNHEQSHLIGRHRSLCGSHR 552
DDDL N L LS P S TE+ VRPP H S R G R
Sbjct: 7 DDDLGNGDLDDDLSNPRRRSRGRTEAEAVRPPIHAASPEAARLAETGGGER 57
>11_05_0022 + 18442258-18442619,18443827-18443887,18444070-18444186
Length = 179
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 654 GRALACRYSSKGLLPNKYRWWSPSGKGVTGK 746
G A A R SS PN WW+ SG G G+
Sbjct: 44 GHACAVRLSSDLCRPNPSLWWAFSGLGRRGE 74
>10_08_0105 -
14828097-14828226,14828371-14828547,14829690-14829739,
14829841-14829909,14829976-14830074,14830148-14830226,
14830587-14830687,14830794-14830862,14831019-14831059,
14831313-14831663,14831676-14832511,14832674-14832777,
14833587-14834003,14836108-14836491
Length = 968
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 726 GKGVTGKVWLAKWRGEKVAVKVFFTTE 806
G G G+V+ A W G +VAVK F E
Sbjct: 696 GLGSYGEVYHADWNGTEVAVKKFLDQE 722
>07_03_0169 + 14670994-14673714,14673799-14673879,14675460-14675612,
14675910-14676073,14676162-14676309,14676426-14676548,
14676754-14676841,14677493-14677674
Length = 1219
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 726 GKGVTGKVWLAKWRGEKVAVK 788
G G G V+ KWRG VA+K
Sbjct: 948 GSGTFGTVYHGKWRGSDVAIK 968
>06_03_0927 +
26015956-26018230,26018323-26018471,26018550-26018618,
26018701-26018853,26018927-26019090,26019207-26019354,
26020348-26020470,26020560-26020647,26020781-26020950
Length = 1112
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 726 GKGVTGKVWLAKWRGEKVAVK 788
G G G V+ KWRG VA+K
Sbjct: 845 GSGTFGTVYHGKWRGSDVAIK 865
>06_03_0636 + 22983898-22985043
Length = 381
Score = 28.3 bits (60), Expect = 8.7
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = -3
Query: 881 DDPRMLSCRINTXLVILGFSEP--GRFLGREEYFD 783
D+PR L C LV+ G+ P GRF+G E+FD
Sbjct: 221 DEPRGL-CVDGKFLVVGGYPTPAQGRFVGSAEWFD 254
>06_01_0569 + 4019254-4021996,4022121-4022272,4022356-4022427,
4022521-4022673,4022749-4022912,4022990-4023137,
4023530-4023652,4023774-4023861,4023951-4024129
Length = 1273
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 726 GKGVTGKVWLAKWRGEKVAVK 788
G G G V+ KWRG VA+K
Sbjct: 1003 GSGTFGTVYHGKWRGSDVAIK 1023
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,293,697
Number of Sequences: 37544
Number of extensions: 443206
Number of successful extensions: 1698
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1696
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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