Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_I05
(895 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23511-3|AAC46790.1| 636|Caenorhabditis elegans Small protein 6... 50 2e-06
AF104017-1|AAD12261.1| 636|Caenorhabditis elegans serine-threon... 50 2e-06
U58727-5|AAB00585.1| 1106|Caenorhabditis elegans Hypothetical pr... 36 0.030
Z81028-1|CAB02690.1| 1099|Caenorhabditis elegans Hypothetical pr... 35 0.068
M32877-1|AAA28001.1| 669|Caenorhabditis elegans daf-1 protein. 35 0.068
AF067616-10|AAC19189.2| 668|Caenorhabditis elegans Abnormal dau... 35 0.068
AF067616-9|AAP82657.1| 669|Caenorhabditis elegans Abnormal daue... 35 0.068
AC024791-20|AAO12400.1| 574|Caenorhabditis elegans Hypothetical... 32 0.64
AC024791-19|AAF60657.2| 618|Caenorhabditis elegans Hypothetical... 32 0.64
Z82072-1|CAB04920.2| 467|Caenorhabditis elegans Hypothetical pr... 31 1.1
AL032636-6|CAB54421.1| 467|Caenorhabditis elegans Hypothetical ... 31 1.1
Z35598-1|CAA84656.1| 1343|Caenorhabditis elegans Hypothetical pr... 31 1.5
AF038618-12|AAM98017.2| 397|Caenorhabditis elegans P38 map kina... 31 1.5
AF038618-11|AAM98016.1| 419|Caenorhabditis elegans P38 map kina... 31 1.5
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p... 29 4.5
U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z48621-12|CAA88545.2| 425|Caenorhabditis elegans Hypothetical p... 29 5.9
AF022981-11|AAG24207.1| 746|Caenorhabditis elegans Hypothetical... 29 5.9
U70849-11|AAK29800.1| 897|Caenorhabditis elegans Hypothetical p... 28 7.8
U70849-10|AAK29799.1| 910|Caenorhabditis elegans Hypothetical p... 28 7.8
>U23511-3|AAC46790.1| 636|Caenorhabditis elegans Small protein 6
protein.
Length = 636
Score = 50.4 bits (115), Expect = 2e-06
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Frame = +1
Query: 220 SNGTCVTQVGGYCFVAVEEVLDESGSVVLD-RTAGCLSADE-SGL--MQCKSSQVPHQHP 387
+N TCV Q G C+ AVEEV +++ + GC + + SG + C S + H P
Sbjct: 79 NNMTCVKQDGAACYHAVEEVYNKAEKRMETLHKWGCATLERGSGASHLTCNSWRAAHHSP 138
Query: 388 KVIECCYDDDLCNLRLHP 441
K I CCY+ + CN L P
Sbjct: 139 KSIGCCYEGNYCNKNLIP 156
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/56 (42%), Positives = 32/56 (57%)
Frame = +3
Query: 726 GKGVTGKVWLAKWRGEKVAVKVFFTTEEXSWFRETENYQXGVDATR*HSWIIAADI 893
G+G G+V A +RG VAVK F+TT+E SW E + YQ + +AADI
Sbjct: 272 GQGRYGEVRKALYRGSYVAVKTFYTTDEDSWKNERDVYQTNMINHENILQFVAADI 327
Score = 33.5 bits (73), Expect = 0.21
Identities = 12/23 (52%), Positives = 20/23 (86%)
Frame = +2
Query: 677 LVQRTVAKQIQMVESIGKGRYGE 745
L+QRTV + + ++++IG+GRYGE
Sbjct: 256 LIQRTVRQDLTIIKTIGQGRYGE 278
>AF104017-1|AAD12261.1| 636|Caenorhabditis elegans serine-threonine
kinase SMA-6 protein.
Length = 636
Score = 50.4 bits (115), Expect = 2e-06
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Frame = +1
Query: 220 SNGTCVTQVGGYCFVAVEEVLDESGSVVLD-RTAGCLSADE-SGL--MQCKSSQVPHQHP 387
+N TCV Q G C+ AVEEV +++ + GC + + SG + C S + H P
Sbjct: 79 NNMTCVKQDGAACYHAVEEVYNKAEKRMETLHKWGCATLERGSGASHLTCNSWRAAHHSP 138
Query: 388 KVIECCYDDDLCNLRLHP 441
K I CCY+ + CN L P
Sbjct: 139 KSIGCCYEGNYCNKNLIP 156
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/56 (42%), Positives = 32/56 (57%)
Frame = +3
Query: 726 GKGVTGKVWLAKWRGEKVAVKVFFTTEEXSWFRETENYQXGVDATR*HSWIIAADI 893
G+G G+V A +RG VAVK F+TT+E SW E + YQ + +AADI
Sbjct: 272 GQGRYGEVRKALYRGSYVAVKTFYTTDEDSWKNERDVYQTNMINHENILQFVAADI 327
Score = 33.5 bits (73), Expect = 0.21
Identities = 12/23 (52%), Positives = 20/23 (86%)
Frame = +2
Query: 677 LVQRTVAKQIQMVESIGKGRYGE 745
L+QRTV + + ++++IG+GRYGE
Sbjct: 256 LIQRTVRQDLTIIKTIGQGRYGE 278
>U58727-5|AAB00585.1| 1106|Caenorhabditis elegans Hypothetical
protein D1005.1 protein.
Length = 1106
Score = 36.3 bits (80), Expect = 0.030
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +3
Query: 693 LPNKYRWWSPSGKGVTGKVWLAKWRGEKVAVKVFFTTEEXSWFRET-ENY-QXGVDATR* 866
+ NKY W + KGV L K RG+ VK+ E +WF +T ++Y + G R
Sbjct: 42 IANKYEWLARDNKGVIKPDQLIKRRGKLGLVKIGTPQELKAWFEKTGDSYVRVGQTEGRL 101
Query: 867 HSWII 881
H++I+
Sbjct: 102 HTFIV 106
>Z81028-1|CAB02690.1| 1099|Caenorhabditis elegans Hypothetical
protein B0365.1 protein.
Length = 1099
Score = 35.1 bits (77), Expect = 0.068
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +3
Query: 702 KYRWWSPSGKGVTGKVWLAKWRGEKVAVKVFFTTEEXSWFRETENYQXGVDAT--R*HSW 875
KY W + KGV L K RG+ VK+ E +WF +T N V T R H++
Sbjct: 45 KYEWLAQDNKGVIKPDQLIKRRGKLGLVKIGSPKELEAWFGKTANSYVKVGQTEGRLHTF 104
Query: 876 II 881
I+
Sbjct: 105 IV 106
>M32877-1|AAA28001.1| 669|Caenorhabditis elegans daf-1 protein.
Length = 669
Score = 35.1 bits (77), Expect = 0.068
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +3
Query: 726 GKGVTGKVWLAKWRGEKVAVKVFFTTEEXSWFRETENYQ 842
G G G V +RGE VAVKVF +E ++ +ETE ++
Sbjct: 300 GSGRFGNVSRGDYRGEAVAVKVFNALDEPAFHKETEIFE 338
>AF067616-10|AAC19189.2| 668|Caenorhabditis elegans Abnormal dauer
formation protein1, isoform b protein.
Length = 668
Score = 35.1 bits (77), Expect = 0.068
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +3
Query: 726 GKGVTGKVWLAKWRGEKVAVKVFFTTEEXSWFRETENYQ 842
G G G V +RGE VAVKVF +E ++ +ETE ++
Sbjct: 300 GSGRFGNVSRGDYRGEAVAVKVFNALDEPAFHKETEIFE 338
>AF067616-9|AAP82657.1| 669|Caenorhabditis elegans Abnormal dauer
formation protein1, isoform a protein.
Length = 669
Score = 35.1 bits (77), Expect = 0.068
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +3
Query: 726 GKGVTGKVWLAKWRGEKVAVKVFFTTEEXSWFRETENYQ 842
G G G V +RGE VAVKVF +E ++ +ETE ++
Sbjct: 300 GSGRFGNVSRGDYRGEAVAVKVFNALDEPAFHKETEIFE 338
>AC024791-20|AAO12400.1| 574|Caenorhabditis elegans Hypothetical
protein Y47G6A.5b protein.
Length = 574
Score = 31.9 bits (69), Expect = 0.64
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +3
Query: 726 GKGVTGKVWLAKWRGEKVAVK 788
G+G G+V+LAKW+G VAVK
Sbjct: 291 GRGQFGEVYLAKWKGVDVAVK 311
>AC024791-19|AAF60657.2| 618|Caenorhabditis elegans Hypothetical
protein Y47G6A.5a protein.
Length = 618
Score = 31.9 bits (69), Expect = 0.64
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +3
Query: 726 GKGVTGKVWLAKWRGEKVAVK 788
G+G G+V+LAKW+G VAVK
Sbjct: 335 GRGQFGEVYLAKWKGVDVAVK 355
>Z82072-1|CAB04920.2| 467|Caenorhabditis elegans Hypothetical
protein W05H12.1 protein.
Length = 467
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +1
Query: 175 LRCECAGARACPDGSSNGTCVTQVGGYCFVAVEEVLDESGSVVLDRTA--GCLSADESGL 348
++C C+GA D + G T V + VE+ + +++R A C++ +G
Sbjct: 120 IQCVCSGAHCKNDKTCVGELCTFVENHVTEQVEQGCTNASVPLIERRAIGSCMAPPITGA 179
Query: 349 MQCKSSQVPHQHPKVIECCYDDDLCN 426
M ++ H V C D CN
Sbjct: 180 MHHTVAKDAHSLLGVESCICGTDYCN 205
>AL032636-6|CAB54421.1| 467|Caenorhabditis elegans Hypothetical
protein W05H12.1 protein.
Length = 467
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +1
Query: 175 LRCECAGARACPDGSSNGTCVTQVGGYCFVAVEEVLDESGSVVLDRTA--GCLSADESGL 348
++C C+GA D + G T V + VE+ + +++R A C++ +G
Sbjct: 120 IQCVCSGAHCKNDKTCVGELCTFVENHVTEQVEQGCTNASVPLIERRAIGSCMAPPITGA 179
Query: 349 MQCKSSQVPHQHPKVIECCYDDDLCN 426
M ++ H V C D CN
Sbjct: 180 MHHTVAKDAHSLLGVESCICGTDYCN 205
>Z35598-1|CAA84656.1| 1343|Caenorhabditis elegans Hypothetical protein
F10F2.2 protein.
Length = 1343
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -3
Query: 752 PHLPRNALS-RWTPPSVFVWQQSFGRVAASQSPTLKIFRN 636
PH R+ L+ +W S W F + + SP +K+FRN
Sbjct: 1298 PHADRSFLTWQWAESSEVPWNARFDQKTVALSPWIKMFRN 1337
>AF038618-12|AAM98017.2| 397|Caenorhabditis elegans P38 map kinase
family protein 2,isoform b protein.
Length = 397
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +3
Query: 681 SKGLLPNKYRWWSPSGKGVTGKVWLAKWR--GEKVAVKVFF 797
+K +LP Y P G+G G V A++ G++VA+K FF
Sbjct: 41 TKWVLPQWYNSLKPLGEGAYGVVCTAEYEPTGDRVAIKKFF 81
>AF038618-11|AAM98016.1| 419|Caenorhabditis elegans P38 map kinase
family protein 2,isoform a protein.
Length = 419
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +3
Query: 681 SKGLLPNKYRWWSPSGKGVTGKVWLAKWR--GEKVAVKVFF 797
+K +LP Y P G+G G V A++ G++VA+K FF
Sbjct: 41 TKWVLPQWYNSLKPLGEGAYGVVCTAEYEPTGDRVAIKKFF 81
>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
protein F48E3.8a protein.
Length = 2427
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
Frame = +1
Query: 166 GRGLRCECAGARACPDG--SSNGTC--VTQVGGYC 258
G GL C +G +CP+G S NG C Q+G C
Sbjct: 787 GEGLMCGASGKCSCPEGLFSVNGKCRSYVQLGQTC 821
>U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical
protein F48E3.8b protein.
Length = 1299
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
Frame = +1
Query: 166 GRGLRCECAGARACPDG--SSNGTC--VTQVGGYC 258
G GL C +G +CP+G S NG C Q+G C
Sbjct: 787 GEGLMCGASGKCSCPEGLFSVNGKCRSYVQLGQTC 821
>Z48621-12|CAA88545.2| 425|Caenorhabditis elegans Hypothetical
protein R07B1.8 protein.
Length = 425
Score = 28.7 bits (61), Expect = 5.9
Identities = 19/97 (19%), Positives = 35/97 (36%)
Frame = +1
Query: 229 TCVTQVGGYCFVAVEEVLDESGSVVLDRTAGCLSADESGLMQCKSSQVPHQHPKVIECCY 408
+CV G + A +++ + + T L ES C H K+ + C+
Sbjct: 11 SCVQLTTGQFYCA--DLIQQCAKSAAEYTEQILQYKESAFKSCVRRPACHTERKIFDECF 68
Query: 409 DDDLCNLRLHPQLSEPSPDVTESPGVRPPNHEQSHLI 519
D + + P S D +PP + + L+
Sbjct: 69 DASVSATHISPPQESTSNDGETRKVTQPPMVKYNSLL 105
>AF022981-11|AAG24207.1| 746|Caenorhabditis elegans Hypothetical
protein W03F9.4 protein.
Length = 746
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1
Query: 190 AGARACPDGSSNGTCVT 240
AG ACPDGS+ G C T
Sbjct: 683 AGGFACPDGSNYGVCYT 699
>U70849-11|AAK29800.1| 897|Caenorhabditis elegans Hypothetical
protein F29B9.2b protein.
Length = 897
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 633 YVPKYLQGRALACRYSSKGLLPNKYRWWSPSGKGVTGKVWLAKW 764
+ PK + + RY K + P++YRW+SP+ K + +V W
Sbjct: 270 FCPKCVPHTGHSIRY--KVVAPHRYRWYSPNEKHLGIEVGSKTW 311
>U70849-10|AAK29799.1| 910|Caenorhabditis elegans Hypothetical
protein F29B9.2a protein.
Length = 910
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 633 YVPKYLQGRALACRYSSKGLLPNKYRWWSPSGKGVTGKVWLAKW 764
+ PK + + RY K + P++YRW+SP+ K + +V W
Sbjct: 283 FCPKCVPHTGHSIRY--KVVAPHRYRWYSPNEKHLGIEVGSKTW 324
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,166,496
Number of Sequences: 27780
Number of extensions: 337864
Number of successful extensions: 1193
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1191
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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