Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_I05
         (895 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          29   0.076
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    28   0.13 
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          26   0.40 
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                25   0.93 
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              24   2.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   6.6  

>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 28.7 bits (61), Expect = 0.076
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +1

Query: 634 MFRNIFRVGLWLAATRPKDCCQTNTDGGVHRERAL 738
           ++ NI R   W   +RP++  QT +  G+HR++ L
Sbjct: 37  VYNNIKRKRSW---SRPRESAQTTSKAGIHRKKVL 68


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 27.9 bits (59), Expect = 0.13
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +1

Query: 634 MFRNIFRVGLWLAATRPKDCCQTNTDGGVHRERAL 738
           ++ NI R   W   +RP++  QT +  G+HR++ L
Sbjct: 158 VYNNIKRKRSW---SRPREPAQTTSKAGIHRKKVL 189


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 26.2 bits (55), Expect = 0.40
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +1

Query: 643 NIFRVGLWLAATRPKDCCQTNTDGGVHRERAL 738
           NI R   W   +RP++  QT +  G+HR++ L
Sbjct: 39  NIKRKRWW---SRPREPAQTTSKAGIHRKKVL 67


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 25.0 bits (52), Expect = 0.93
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +3

Query: 726 GKGVTGKVWLAKWRGEKVAVKVFFTTEEXSWFRETENY 839
           G G  G V+ A ++GE+VA K+   TE+ S    +E +
Sbjct: 74  GSGGFGIVYKALYKGEQVAAKI-IQTEKYSNMLNSEKH 110


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 9/35 (25%), Positives = 18/35 (51%)
 Frame = -3

Query: 719 TPPSVFVWQQSFGRVAASQSPTLKIFRNISAALVE 615
           TPP   VW+++   +     P +++F + S  L +
Sbjct: 337 TPPPPLVWRRNGADLETLNEPEIRVFNDGSLYLTK 371


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -3

Query: 752  PHLPRNALSRWTPP 711
            PHLP    + W PP
Sbjct: 1154 PHLPFTPFNFWNPP 1167


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,943
Number of Sequences: 438
Number of extensions: 4100
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28904421
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)