Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_I02
(893 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 78 3e-13
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 67 7e-10
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 5e-09
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 62 2e-08
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 54 5e-06
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 54 6e-06
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ... 48 4e-04
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 42 0.021
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 38 0.46
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 36 1.4
UniRef50_Q0RU15 Cluster: Putative uncharacterized protein; n=1; ... 34 4.3
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.6
UniRef50_A7BAA3 Cluster: Putative uncharacterized protein; n=1; ... 33 7.4
UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer ariet... 33 7.4
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 78.2 bits (184), Expect = 3e-13
Identities = 53/109 (48%), Positives = 54/109 (49%)
Frame = +1
Query: 559 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCAALSXFRPXPLTGYLSAFLPFGKRGAFS 738
TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCA L FRP L PF R A+
Sbjct: 24 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALL--FRPCRLP---DTCPPFSLREAWR 78
Query: 739 *LTLXGXXXSXXXXXXXXXXCVHXXXXXXXXXXXXXXXIVLSPXR*XTT 885
L S V IVLSP R TT
Sbjct: 79 FLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPVTIVLSPTRKDTT 127
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 66.9 bits (156), Expect = 7e-10
Identities = 30/35 (85%), Positives = 31/35 (88%)
Frame = +1
Query: 559 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCAAL 663
TSITK DAQ+ GGETRQDYKDTRRFPL APSCA L
Sbjct: 60 TSITKSDAQISGGETRQDYKDTRRFPLAAPSCALL 94
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.1 bits (149), Expect = 5e-09
Identities = 38/57 (66%), Positives = 39/57 (68%)
Frame = -2
Query: 556 RGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVIPLILWITVLPPLSELIPLAAAERP 386
RGAEPMEKR + L V LL CS L PLILWITVLPPLSEL PLAA ERP
Sbjct: 4 RGAEPMEKRLRCWLLPVLCFLLT-CSFRL---YPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 62.1 bits (144), Expect = 2e-08
Identities = 28/35 (80%), Positives = 29/35 (82%)
Frame = +1
Query: 559 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCAAL 663
TSI K DAQ+ GGETRQDYKD RRFPL APSCA L
Sbjct: 92 TSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALL 126
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +2
Query: 323 RGKAVCVLGALPLPRSLTRCARSFGCGERYQLT 421
R +C G +PLPRSLTR ARSFGCGERY+LT
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 54.0 bits (124), Expect = 5e-06
Identities = 30/54 (55%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +2
Query: 299 CINESANARGKAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQG 457
CI + A AR +AV VL ALPL RS TRC RS GCG + R YG PQ QG
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQG 319
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 53.6 bits (123), Expect = 6e-06
Identities = 32/65 (49%), Positives = 39/65 (60%)
Frame = -1
Query: 779 RPKPEXXIPXSVSYEKAPRFPXGRKADRYPVSGQGRXQESAAQEGASRGKRLVSL*SCRV 600
RPKP SVSYEKAPRFP G+KA++ VSG+ + + A EGA+ K SL
Sbjct: 38 RPKPSRDTS-SVSYEKAPRFPKGKKAEQ--VSGKRQGRNRRAHEGAAGEKSPASLSPVGF 94
Query: 599 SPPLT 585
PPLT
Sbjct: 95 RPPLT 99
>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
cellular organisms|Rep: Uncharacterized 9.4 kDa protein
- Escherichia coli
Length = 84
Score = 47.6 bits (108), Expect = 4e-04
Identities = 21/27 (77%), Positives = 21/27 (77%)
Frame = +3
Query: 813 PRSXPDRCALSGYYRLESXPVXHDLSP 893
P PDRCALSG YRLES PV HDLSP
Sbjct: 4 PPVQPDRCALSGNYRLESNPVRHDLSP 30
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +2
Query: 101 DPDMIRYIDEFGQTTTRMQ 157
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 41.9 bits (94), Expect = 0.021
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +3
Query: 225 INKLTTTIAFILCFRFRXEVWEVFSALMNRPTRGERRFAYW 347
+++LT L RF V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 37.5 bits (83), Expect = 0.46
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = -3
Query: 369 ERGSGRAPNTQTAFPRALADSLMQ 298
+R + APNTQTA PRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 35.9 bits (79), Expect = 1.4
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +1
Query: 523 VAGVFXXXXXXXTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCAAL 663
++ +F T+ITKI Q + +T+ +YK T FPL++PS + L
Sbjct: 65 LSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPLQSPSYSLL 111
>UniRef50_Q0RU15 Cluster: Putative uncharacterized protein; n=1;
Frankia alni ACN14a|Rep: Putative uncharacterized
protein - Frankia alni (strain ACN14a)
Length = 208
Score = 34.3 bits (75), Expect = 4.3
Identities = 22/56 (39%), Positives = 27/56 (48%)
Frame = -1
Query: 689 VSGQGRXQESAAQEGASRGKRLVSL*SCRVSPPLT*ASIFVMLVQGGGAYGKTPAT 522
V QGR Q A + S+ V + SC PPL+ S F LV+GGG G T
Sbjct: 141 VFDQGRVQREIAAQVKSQSGVTVKV-SCPKDPPLSAGSTFRCLVRGGGGAGFATVT 195
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.6
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -2
Query: 259 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 95
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_A7BAA3 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 2443
Score = 33.5 bits (73), Expect = 7.4
Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = -1
Query: 659 AAQEGASRGKRLVSL*SCRVSPPLT*ASIFVMLVQGGGAYGKTPATRPF-YGSWPFAGLL 483
+A G G V L + +V PL + FV GGG Y T + Y SW + +
Sbjct: 293 SAYNGNQNGIGFVELQNIKVVDPLPEGAEFVSAT-GGGVYDSVTRTVTWSYDSWSWQNPI 351
Query: 482 LTCSFLRYPPDSVD 441
LRYP S D
Sbjct: 352 QNTVVLRYPQGSYD 365
>UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer
arietinum|Rep: Reverse transcriptase - Cicer arietinum
(Chickpea) (Garbanzo)
Length = 37
Score = 33.5 bits (73), Expect = 7.4
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 432 NTVIHRIRGITQERTCE 482
NTVIH +GITQERTCE
Sbjct: 21 NTVIHXNQGITQERTCE 37
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 748,075,772
Number of Sequences: 1657284
Number of extensions: 13440397
Number of successful extensions: 33489
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 32048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33449
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 80751996367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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