Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_H23
         (893 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49968-5|CAE47470.1| 1155|Caenorhabditis elegans Hypothetical pr...    38   0.007
Z49968-4|CAA90261.1| 1156|Caenorhabditis elegans Hypothetical pr...    38   0.007
Z81487-4|CAB03998.2|  420|Caenorhabditis elegans Hypothetical pr...    31   1.5  
Z78419-4|CAB01700.1|  226|Caenorhabditis elegans Hypothetical pr...    28   7.8  
U88170-2|AAB42250.1|  203|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>Z49968-5|CAE47470.1| 1155|Caenorhabditis elegans Hypothetical
           protein M110.4b protein.
          Length = 1155

 Score = 38.3 bits (85), Expect = 0.007
 Identities = 16/60 (26%), Positives = 36/60 (60%)
 Frame = +2

Query: 464 LKGVILLIFEKALDEPKYSSMYAQLCKRLSEEAPNFEPPGQPCTFKLLLLNKCRTEFENR 643
           L  V+ ++F+KA++EPK+ ++YA++CK  ++        G    F+  +L + +  F+++
Sbjct: 551 LAQVVEIVFDKAVEEPKFCALYAEMCK--AQANHELSQTGGKSAFRNKVLTRTQMTFQDK 608


>Z49968-4|CAA90261.1| 1156|Caenorhabditis elegans Hypothetical
           protein M110.4a protein.
          Length = 1156

 Score = 38.3 bits (85), Expect = 0.007
 Identities = 16/60 (26%), Positives = 36/60 (60%)
 Frame = +2

Query: 464 LKGVILLIFEKALDEPKYSSMYAQLCKRLSEEAPNFEPPGQPCTFKLLLLNKCRTEFENR 643
           L  V+ ++F+KA++EPK+ ++YA++CK  ++        G    F+  +L + +  F+++
Sbjct: 552 LAQVVEIVFDKAVEEPKFCALYAEMCK--AQANHELSQTGGKSAFRNKVLTRTQMTFQDK 609


>Z81487-4|CAB03998.2|  420|Caenorhabditis elegans Hypothetical
           protein C54E10.5 protein.
          Length = 420

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
 Frame = -2

Query: 631 FSATFVKQQKLKCARLTRRLEVGSLFAEPLAELCVHRRVLRL---VQGFLKNEKDDALEX 461
           F  T V  +K KC + T + E+G+   E L + C  ++ + L    +    + KDD+ + 
Sbjct: 41  FRRTVVLNRKYKCIQKTGKCEIGAGGEEKLCKFCRFKKCIDLGMTTENVRTDFKDDSEDT 100

Query: 460 PCRSP 446
             +SP
Sbjct: 101 SSQSP 105


>Z78419-4|CAB01700.1|  226|Caenorhabditis elegans Hypothetical
           protein F26A3.4 protein.
          Length = 226

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +3

Query: 612 LTNVALNLKIGRRPSXPFEDXNVIAGRXRKR 704
           L +V LN+ I  RP+ P +D N+I    R+R
Sbjct: 172 LPDVYLNIAIPARPASPEQDPNMIPDEPRER 202


>U88170-2|AAB42250.1|  203|Caenorhabditis elegans Hypothetical
           protein C10G11.9 protein.
          Length = 203

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 22/59 (37%), Positives = 28/59 (47%)
 Frame = +3

Query: 411 SKAER*SPRARIGLRQGSSRASSFSFLRKPWTSLSTRRCTHSSASGSAKRLPTSSRRVS 587
           SK+ R S R  +  R G SR+S  S  R    + S  R +  S SGS +     SRR S
Sbjct: 108 SKSRRSSSRGSVYGRTGRSRSSKRSRSRSRPRTRSGSRSSSRSRSGSRRSSRRRSRRRS 166


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,425,105
Number of Sequences: 27780
Number of extensions: 213666
Number of successful extensions: 616
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 616
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)