BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_H19
(912 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 25 3.2
AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha ... 25 3.2
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 24 7.4
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein. 24 7.4
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 23 9.7
AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 23 9.7
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 25.0 bits (52), Expect = 3.2
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +2
Query: 833 PXXNPPXXPPPXXPPXPVP 889
P PP PPP P P P
Sbjct: 577 PNAQPPPAPPPPPPMGPPP 595
Score = 23.4 bits (48), Expect = 9.7
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +1
Query: 244 PPPXXGPPXXXVXGXP 291
PPP GPP + G P
Sbjct: 587 PPPPMGPPPSPLAGGP 602
>AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha 1
chain precursor protein.
Length = 801
Score = 25.0 bits (52), Expect = 3.2
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 622 GFPRIPGXXGEKXXKXNWPQKXQKPXKG 705
G+ IPG GEK P+ K KG
Sbjct: 202 GYAGIPGTKGEKGEPARHPENYNKGQKG 229
Score = 24.2 bits (50), Expect = 5.6
Identities = 14/50 (28%), Positives = 16/50 (32%)
Frame = -1
Query: 654 FPGXXRDSXETXFXXXXXVVXXXPXGXPGXXXLXGGXXKKAQKXFPLFPG 505
FPG E F G PG L G +K + P PG
Sbjct: 516 FPGLKGQKGERGFKGVMGTPGDAKEGRPGAPGLPGRDGEKGEPGRPGLPG 565
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 23.8 bits (49), Expect = 7.4
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -1
Query: 894 SXGTGXGGXKGGGXXGGFXXG 832
S G+G GG GGG G G
Sbjct: 649 SPGSGGGGGGGGGGGGSVGSG 669
Score = 23.4 bits (48), Expect = 9.7
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -1
Query: 888 GTGXGGXKGGGXXGG 844
G G GG GGG GG
Sbjct: 294 GVGGGGGGGGGGGGG 308
>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
Length = 1132
Score = 23.8 bits (49), Expect = 7.4
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 888 GTGXGGXKGGGXXGGFXXG 832
G G GG GGG GG G
Sbjct: 545 GVGGGGGGGGGGGGGGVIG 563
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 23.4 bits (48), Expect = 9.7
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -1
Query: 888 GTGXGGXKGGGXXGG 844
G G GG GGG GG
Sbjct: 294 GVGGGGGGGGGGGGG 308
>AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless
female-specific zinc-fingerC isoform protein.
Length = 593
Score = 23.4 bits (48), Expect = 9.7
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -1
Query: 888 GTGXGGXKGGGXXGG 844
G G GG GGG GG
Sbjct: 246 GVGGGGGGGGGGGGG 260
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 465,757
Number of Sequences: 2352
Number of extensions: 5607
Number of successful extensions: 22
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 98814789
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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